RNA–Protein interactions for RNA: ENST00000559099.5

HMG20A-208, Transcript of high mobility group 20A, humanhuman

TSL 5

Gene HMG20A, Length 558 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-208ENST00000559099 SLC4A1APQ9BWU0 796 aaKnown RBP11.65□□□□□ -0.54
HMG20A-208ENST00000559099 NSD2O96028 1365 aa11.65□□□□□ -0.55
HMG20A-208ENST00000559099 TOGARAM1Q9Y4F4 1720 aa11.64□□□□□ -0.55
HMG20A-208ENST00000559099 C5P01031 1676 aa11.64□□□□□ -0.55
HMG20A-208ENST00000559099 PLEKHG2Q9H7P9 1386 aa11.64□□□□□ -0.55
HMG20A-208ENST00000559099 DOT1LQ8TEK3 1739 aa11.63□□□□□ -0.55
HMG20A-208ENST00000559099 CSB-PGBD3P0DP91 1061 aa11.63□□□□□ -0.55
HMG20A-208ENST00000559099 RRAGCQ9HB90 399 aa11.63□□□□□ -0.55
HMG20A-208ENST00000559099 PDE4DIPQ5VU43 2346 aa11.63□□□□□ -0.55
HMG20A-208ENST00000559099 KIF13BQ9NQT8 1826 aa11.63□□□□□ -0.55
HMG20A-208ENST00000559099 N4BP2Q86UW6 1770 aaPredicted RBP11.62□□□□□ -0.55
HMG20A-208ENST00000559099 ARHGEF25Q86VW2 580 aa11.62□□□□□ -0.55
HMG20A-208ENST00000559099 CCDC61Q9Y6R9 512 aa11.62□□□□□ -0.55
HMG20A-208ENST00000559099 LOC105371045A0A1W2PR82 267 aa11.61□□□□□ -0.55
HMG20A-208ENST00000559099 C9orf131Q5VYM1 1079 aa11.61□□□□□ -0.55
HMG20A-208ENST00000559099 CDK19Q9BWU1 502 aa11.61□□□□□ -0.55
HMG20A-208ENST00000559099 CCNL1Q9UK58 526 aaPredicted RBP11.61□□□□□ -0.55
HMG20A-208ENST00000559099 BRCA1P38398 1863 aaKnown RBP11.61□□□□□ -0.55
HMG20A-208ENST00000559099 KDM2BQ8NHM5 1336 aa11.6□□□□□ -0.55
HMG20A-208ENST00000559099 NLRP6P59044 892 aa11.6□□□□□ -0.55
HMG20A-208ENST00000559099 ARHGAP27Q6ZUM4 889 aa11.6□□□□□ -0.55
HMG20A-208ENST00000559099 ERBB3P21860 1342 aa11.6□□□□□ -0.55
HMG20A-208ENST00000559099 TAF1LQ8IZX4 1826 aa11.59□□□□□ -0.55
HMG20A-208ENST00000559099 CTCFP49711 727 aaPredicted RBP11.59□□□□□ -0.55
HMG20A-208ENST00000559099 AMIGO3Q86WK7 504 aa11.59□□□□□ -0.55
HMG20A-208ENST00000559099 NFAT5O94916 1531 aa11.59□□□□□ -0.55
HMG20A-208ENST00000559099 ANKRD36BQ8N2N9 1353 aa11.58□□□□□ -0.56
HMG20A-208ENST00000559099 SMIM5Q71RC9 77 aa11.58□□□□□ -0.56
HMG20A-208ENST00000559099 BCS1LQ9Y276 419 aa11.58□□□□□ -0.56
HMG20A-208ENST00000559099 IL2RBP14784 551 aa11.57□□□□□ -0.56
HMG20A-208ENST00000559099 PRIM1P49642 420 aaKnown RBP11.57□□□□□ -0.56
HMG20A-208ENST00000559099 LBX1P52954 281 aa11.57□□□□□ -0.56
HMG20A-208ENST00000559099 MKRN1Q9UHC7 482 aaKnown RBP11.57□□□□□ -0.56
HMG20A-208ENST00000559099 UBR3Q6ZT12 1888 aa11.57□□□□□ -0.56
HMG20A-208ENST00000559099 ARFGEF1Q9Y6D6 1849 aa11.56□□□□□ -0.56
HMG20A-208ENST00000559099 CCDC85CA6NKD9 419 aa11.56□□□□□ -0.56
HMG20A-208ENST00000559099 FLAD1Q8NFF5 587 aa11.55□□□□□ -0.56
HMG20A-208ENST00000559099 SYTL4Q96C24 671 aaPredicted RBP11.55□□□□□ -0.56
HMG20A-208ENST00000559099 SBF1O95248 1867 aa11.55□□□□□ -0.56
HMG20A-208ENST00000559099 C4BP0C0L5 1744 aa11.55□□□□□ -0.56
HMG20A-208ENST00000559099 A0A0G2JLW4 131 aa11.54□□□□□ -0.56
HMG20A-208ENST00000559099 VIRMAQ69YN4 1812 aaKnown RBP11.53□□□□□ -0.56
HMG20A-208ENST00000559099 SOX12O15370 315 aa11.53□□□□□ -0.56
HMG20A-208ENST00000559099 DDX54Q8TDD1 881 aaKnown RBP11.53□□□□□ -0.56
HMG20A-208ENST00000559099 CREBZFQ9NS37 354 aa11.53□□□□□ -0.56
HMG20A-208ENST00000559099 NLRP2Q9NX02 1062 aa11.53□□□□□ -0.56
HMG20A-208ENST00000559099 CNTNAP1P78357 1384 aa11.53□□□□□ -0.56
HMG20A-208ENST00000559099 HSPA8P11142 646 aaKnown RBP11.52□□□□□ -0.57
HMG20A-208ENST00000559099 AIDAQ96BJ3 306 aa11.52□□□□□ -0.57
HMG20A-208ENST00000559099 WBP1LQ9NX94 342 aa11.52□□□□□ -0.57
HMG20A-208ENST00000559099 RNF181Q9P0P0 153 aa11.52□□□□□ -0.57
HMG20A-208ENST00000559099 FCHSD2O94868 740 aa11.51□□□□□ -0.57
HMG20A-208ENST00000559099 TGFB2P61812 414 aa11.51□□□□□ -0.57
HMG20A-208ENST00000559099 USP47Q96K76 1375 aa11.51□□□□□ -0.57
HMG20A-208ENST00000559099 KCNH5Q8NCM2 988 aa11.5□□□□□ -0.57
HMG20A-208ENST00000559099 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.49□□□□□ -0.57
HMG20A-208ENST00000559099 PHF14O94880 888 aa11.49□□□□□ -0.57
HMG20A-208ENST00000559099 VEGFAP15692 232 aaPredicted RBP11.49□□□□□ -0.57
HMG20A-208ENST00000559099 DPEP1P16444 411 aa11.49□□□□□ -0.57
HMG20A-208ENST00000559099 KCNA3P22001 575 aa11.48□□□□□ -0.57
HMG20A-208ENST00000559099 DCAF5Q96JK2 942 aa11.48□□□□□ -0.57
HMG20A-208ENST00000559099 LTN1O94822 1766 aa11.48□□□□□ -0.57
HMG20A-208ENST00000559099 KDM6AO15550 1401 aaPredicted RBP11.47□□□□□ -0.57
HMG20A-208ENST00000559099 MMP10P09238 476 aa11.47□□□□□ -0.57
HMG20A-208ENST00000559099 VEGFBP49765 207 aa11.47□□□□□ -0.57
HMG20A-208ENST00000559099 TIAM2Q8IVF5 1701 aa11.46□□□□□ -0.57
HMG20A-208ENST00000559099 POTECB2RU33 542 aa11.46□□□□□ -0.57
HMG20A-208ENST00000559099 AK7Q96M32 723 aa11.46□□□□□ -0.57
HMG20A-208ENST00000559099 PALLDQ8WX93 1383 aa11.45□□□□□ -0.58
HMG20A-208ENST00000559099 ZC3H4Q9UPT8 1303 aaKnown RBP11.45□□□□□ -0.58
HMG20A-208ENST00000559099 GLTPD2A6NH11 291 aa11.45□□□□□ -0.58
HMG20A-208ENST00000559099 CABP2Q9NPB3 220 aa11.45□□□□□ -0.58
HMG20A-208ENST00000559099 CABP1Q9NZU7 370 aa11.45□□□□□ -0.58
HMG20A-208ENST00000559099 C4AP0C0L4 1744 aa11.45□□□□□ -0.58
HMG20A-208ENST00000559099 FAM208AQ9UK61 1670 aaKnown RBP11.45□□□□□ -0.58
HMG20A-208ENST00000559099 NSD3Q9BZ95 1437 aa11.44□□□□□ -0.58
HMG20A-208ENST00000559099 SSFA2P28290 1259 aa11.44□□□□□ -0.58
HMG20A-208ENST00000559099 SRPK2P78362 688 aaKnown RBP11.44□□□□□ -0.58
HMG20A-208ENST00000559099 ANKRD24Q8TF21 1146 aa11.44□□□□□ -0.58
HMG20A-208ENST00000559099 MPHOSPH9Q99550 1183 aa11.44□□□□□ -0.58
HMG20A-208ENST00000559099 TTC21BQ7Z4L5 1316 aa11.43□□□□□ -0.58
HMG20A-208ENST00000559099 MAP2P11137 1827 aaKnown RBP11.42□□□□□ -0.58
HMG20A-208ENST00000559099 MEGF6O75095 1541 aa11.42□□□□□ -0.58
HMG20A-208ENST00000559099 PRPF38BQ5VTL8 546 aaKnown RBP11.42□□□□□ -0.58
HMG20A-208ENST00000559099 CFAP44Q96MT7 982 aa11.42□□□□□ -0.58
HMG20A-208ENST00000559099 THSD7BQ9C0I4 1608 aa11.42□□□□□ -0.58
HMG20A-208ENST00000559099 PASKQ96RG2 1323 aa11.41□□□□□ -0.58
HMG20A-208ENST00000559099 POTEIP0CG38 1075 aa11.41□□□□□ -0.58
HMG20A-208ENST00000559099 POTEJP0CG39 1038 aa11.41□□□□□ -0.58
HMG20A-208ENST00000559099 RASSF7Q02833 373 aa11.41□□□□□ -0.58
HMG20A-208ENST00000559099 DALRD3Q5D0E6 543 aaKnown RBP11.4□□□□□ -0.58
HMG20A-208ENST00000559099 CHADLQ6NUI6 762 aa11.4□□□□□ -0.58
HMG20A-208ENST00000559099 PIM2Q9P1W9 311 aa11.4□□□□□ -0.58
HMG20A-208ENST00000559099 LINC00116Q8NCU8 138 aa11.39□□□□□ -0.59
HMG20A-208ENST00000559099 KDM2AQ9Y2K7 1162 aa11.39□□□□□ -0.59
HMG20A-208ENST00000559099 TTC21AQ8NDW8 1320 aa11.38□□□□□ -0.59
HMG20A-208ENST00000559099 LTBP1Q14766 1721 aa11.38□□□□□ -0.59
HMG20A-208ENST00000559099 HMGB2P26583 209 aaKnown RBP11.38□□□□□ -0.59
HMG20A-208ENST00000559099 ZCRB1Q8TBF4 217 aaKnown RBP11.38□□□□□ -0.59
HMG20A-208ENST00000559099 MCOLN1Q9GZU1 580 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms