RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 K7ELQ4 463 aaPredicted RBP12.12□□□□□ -0.47
SPG11-213ENST00000558988 SV2AQ7L0J3 742 aa12.12□□□□□ -0.47
SPG11-213ENST00000558988 GALNT6Q8NCL4 622 aa12.12□□□□□ -0.47
SPG11-213ENST00000558988 ATP10BO94823 1461 aa12.11□□□□□ -0.47
SPG11-213ENST00000558988 SLC35F4A4IF30 521 aa12.11□□□□□ -0.47
SPG11-213ENST00000558988 ITGA6P23229 1130 aa12.11□□□□□ -0.47
SPG11-213ENST00000558988 MAP3K10Q02779 954 aa12.11□□□□□ -0.47
SPG11-213ENST00000558988 PRR7Q8TB68 274 aa12.11□□□□□ -0.47
SPG11-213ENST00000558988 RAPGEF6Q8TEU7 1601 aa12.11□□□□□ -0.47
SPG11-213ENST00000558988 UBTFP17480 764 aaKnown RBP12.1□□□□□ -0.47
SPG11-213ENST00000558988 CNTNAP5Q8WYK1 1306 aa12.1□□□□□ -0.47
SPG11-213ENST00000558988 CFAP43Q8NDM7 1665 aa12.1□□□□□ -0.47
SPG11-213ENST00000558988 CTHP32929 405 aa12.09□□□□□ -0.47
SPG11-213ENST00000558988 GPIHBP1Q8IV16 184 aa12.09□□□□□ -0.47
SPG11-213ENST00000558988 KIF21BO75037 1637 aa12.08□□□□□ -0.48
SPG11-213ENST00000558988 CELA2BP08218 269 aaPredicted RBP12.08□□□□□ -0.48
SPG11-213ENST00000558988 C4orf48Q5BLP8 95 aa12.08□□□□□ -0.48
SPG11-213ENST00000558988 ATP1B4Q9UN42 357 aaPredicted RBP12.07□□□□□ -0.48
SPG11-213ENST00000558988 ADGRL1O94910 1474 aa12.07□□□□□ -0.48
SPG11-213ENST00000558988 FAM217BQ9NTX9 383 aaPredicted RBP12.06□□□□□ -0.48
SPG11-213ENST00000558988 MAGI3Q5TCQ9 1506 aa12.06□□□□□ -0.48
SPG11-213ENST00000558988 PHF20L1A8MW92 1017 aa12.05□□□□□ -0.48
SPG11-213ENST00000558988 MAP2K5Q13163 448 aa12.05□□□□□ -0.48
SPG11-213ENST00000558988 NUP153P49790 1475 aaKnown RBP12.05□□□□□ -0.48
SPG11-213ENST00000558988 SRSF11Q05519 484 aaKnown RBP12.04□□□□□ -0.48
SPG11-213ENST00000558988 AGERQ15109 404 aa12.04□□□□□ -0.48
SPG11-213ENST00000558988 DESI1Q6ICB0 168 aa12.04□□□□□ -0.48
SPG11-213ENST00000558988 EFCAB5A4FU69 1503 aa12.03□□□□□ -0.48
SPG11-213ENST00000558988 SH3RF1Q7Z6J0 888 aa12.03□□□□□ -0.48
SPG11-213ENST00000558988 ENAMQ9NRM1 1142 aa12.03□□□□□ -0.48
SPG11-213ENST00000558988 IRF6O14896 467 aa12.02□□□□□ -0.49
SPG11-213ENST00000558988 NDUFV2P19404 249 aa12.02□□□□□ -0.49
SPG11-213ENST00000558988 FSHRP23945 695 aa12.02□□□□□ -0.49
SPG11-213ENST00000558988 RTN4Q9NQC3 1192 aaKnown RBP12.02□□□□□ -0.49
SPG11-213ENST00000558988 ABCA9Q8IUA7 1624 aa12.01□□□□□ -0.49
SPG11-213ENST00000558988 PLEKHD1A6NEE1 506 aa12.01□□□□□ -0.49
SPG11-213ENST00000558988 GPCPD1Q9NPB8 672 aa12.01□□□□□ -0.49
SPG11-213ENST00000558988 BEND7Q8N7W2 519 aaPredicted RBP12□□□□□ -0.49
SPG11-213ENST00000558988 CDK13Q14004 1512 aaKnown RBP12□□□□□ -0.49
SPG11-213ENST00000558988 SPINT1O43278 529 aa11.99□□□□□ -0.49
SPG11-213ENST00000558988 RAPGEF3O95398 923 aa11.99□□□□□ -0.49
SPG11-213ENST00000558988 EMILIN1Q9Y6C2 1016 aa11.99□□□□□ -0.49
SPG11-213ENST00000558988 LYPD8Q6UX82 237 aa11.98□□□□□ -0.49
SPG11-213ENST00000558988 MAP10Q9P2G4 905 aa11.98□□□□□ -0.49
SPG11-213ENST00000558988 BAG6P46379 1132 aa11.97□□□□□ -0.49
SPG11-213ENST00000558988 MTMR2Q13614 643 aa11.97□□□□□ -0.49
SPG11-213ENST00000558988 GAS6Q14393 721 aa11.97□□□□□ -0.49
SPG11-213ENST00000558988 AMER1Q5JTC6 1135 aaPredicted RBP11.97□□□□□ -0.49
SPG11-213ENST00000558988 BPHLQ86WA6 291 aaPredicted RBP11.97□□□□□ -0.49
SPG11-213ENST00000558988 CLCN1P35523 988 aa11.96□□□□□ -0.49
SPG11-213ENST00000558988 CBLBQ13191 982 aa11.96□□□□□ -0.49
SPG11-213ENST00000558988 SPIRE2Q8WWL2 714 aa11.96□□□□□ -0.49
SPG11-213ENST00000558988 ARAP3Q8WWN8 1544 aa11.96□□□□□ -0.5
SPG11-213ENST00000558988 ARHGAP35Q9NRY4 1499 aa11.95□□□□□ -0.5
SPG11-213ENST00000558988 SPDYE5A6NIY4 337 aa11.95□□□□□ -0.5
SPG11-213ENST00000558988 HECW1Q76N89 1606 aa11.94□□□□□ -0.5
SPG11-213ENST00000558988 ARID4BQ4LE39 1312 aaPredicted RBP11.94□□□□□ -0.5
SPG11-213ENST00000558988 TTC37Q6PGP7 1564 aa11.94□□□□□ -0.5
SPG11-213ENST00000558988 MOXD2PA6NHM9 499 aa11.94□□□□□ -0.5
SPG11-213ENST00000558988 FURINP09958 794 aa11.94□□□□□ -0.5
SPG11-213ENST00000558988 PODNQ7Z5L7 613 aa11.94□□□□□ -0.5
SPG11-213ENST00000558988 CCDC116Q8IYX3 515 aa11.94□□□□□ -0.5
SPG11-213ENST00000558988 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.94□□□□□ -0.5
SPG11-213ENST00000558988 NEO1Q92859 1461 aa11.94□□□□□ -0.5
SPG11-213ENST00000558988 FMN1Q68DA7 1419 aa11.94□□□□□ -0.5
SPG11-213ENST00000558988 F12P00748 615 aaPredicted RBP11.93□□□□□ -0.5
SPG11-213ENST00000558988 VASH1Q7L8A9 365 aaPredicted RBP11.93□□□□□ -0.5
SPG11-213ENST00000558988 PHLDB1Q86UU1 1377 aa11.92□□□□□ -0.5
SPG11-213ENST00000558988 FANCAO15360 1455 aa11.92□□□□□ -0.5
SPG11-213ENST00000558988 SENP3-EIF4A1A0A087X0R7 540 aa11.92□□□□□ -0.5
SPG11-213ENST00000558988 LCE3BQ5TA77 95 aa11.92□□□□□ -0.5
SPG11-213ENST00000558988 Q6ZVU0 165 aa11.92□□□□□ -0.5
SPG11-213ENST00000558988 C1QTNF2Q9BXJ5 285 aa11.92□□□□□ -0.5
SPG11-213ENST00000558988 MAP4K5Q9Y4K4 846 aa11.92□□□□□ -0.5
SPG11-213ENST00000558988 CTSOP43234 321 aaPredicted RBP11.91□□□□□ -0.5
SPG11-213ENST00000558988 NEDD1Q8NHV4 660 aa11.91□□□□□ -0.5
SPG11-213ENST00000558988 FRMPD1Q5SYB0 1578 aa11.91□□□□□ -0.5
SPG11-213ENST00000558988 AKNAQ7Z591 1439 aa11.9□□□□□ -0.5
SPG11-213ENST00000558988 DENND4BO75064 1496 aaPredicted RBP11.89□□□□□ -0.51
SPG11-213ENST00000558988 MINK1Q8N4C8 1332 aaPredicted RBP11.88□□□□□ -0.51
SPG11-213ENST00000558988 CFAP74Q9C0B2 1584 aa11.88□□□□□ -0.51
SPG11-213ENST00000558988 HECW2Q9P2P5 1572 aa11.88□□□□□ -0.51
SPG11-213ENST00000558988 CCDC102AQ96A19 550 aa11.88□□□□□ -0.51
SPG11-213ENST00000558988 CUEDC1Q9NWM3 386 aaPredicted RBP11.88□□□□□ -0.51
SPG11-213ENST00000558988 CDK11AQ9UQ88 783 aaPredicted RBP11.88□□□□□ -0.51
SPG11-213ENST00000558988 KIF14Q15058 1648 aa11.87□□□□□ -0.51
SPG11-213ENST00000558988 PPP1R26Q5T8A7 1209 aaPredicted RBP11.87□□□□□ -0.51
SPG11-213ENST00000558988 PCF11O94913 1555 aaKnown RBP11.87□□□□□ -0.51
SPG11-213ENST00000558988 CFAP99D6REC4 459 aa11.86□□□□□ -0.51
SPG11-213ENST00000558988 INSM2Q96T92 566 aaPredicted RBP11.86□□□□□ -0.51
SPG11-213ENST00000558988 RICTORQ6R327 1708 aa11.86□□□□□ -0.51
SPG11-213ENST00000558988 ARHGEF40Q8TER5 1519 aa11.86□□□□□ -0.51
SPG11-213ENST00000558988 CLIP1P30622 1438 aa11.86□□□□□ -0.51
SPG11-213ENST00000558988 KRBA1A5PL33 1030 aa11.85□□□□□ -0.51
SPG11-213ENST00000558988 BCRP11274 1271 aa11.85□□□□□ -0.51
SPG11-213ENST00000558988 KRI1Q8N9T8 703 aaKnown RBP11.85□□□□□ -0.51
SPG11-213ENST00000558988 AGBL1Q96MI9 1066 aa11.85□□□□□ -0.51
SPG11-213ENST00000558988 LRRIQ1Q96JM4 1722 aa11.85□□□□□ -0.51
SPG11-213ENST00000558988 MYO5CQ9NQX4 1742 aa11.85□□□□□ -0.51
SPG11-213ENST00000558988 SCAPERQ9BY12 1400 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 137.8 ms