RNA–Protein interactions for RNA: ENST00000558729.5

PKNOX2-210, Transcript of PBX/knotted 1 homeobox 2, humanhuman

TSL 4

Gene PKNOX2, Length 604 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2-210ENST00000558729 SULT6B1Q6IMI4 303 aa22.07■■□□□ 1.12
PKNOX2-210ENST00000558729 FAM196AQ6ZSG2 479 aa22.07■■□□□ 1.12
PKNOX2-210ENST00000558729 BRWD3Q6RI45 1802 aa22.06■■□□□ 1.12
PKNOX2-210ENST00000558729 SPG7Q9UQ90 795 aa22.06■■□□□ 1.12
PKNOX2-210ENST00000558729 BCL9O00512 1426 aa22.06■■□□□ 1.12
PKNOX2-210ENST00000558729 U2SURPO15042 1029 aaKnown RBP22.05■■□□□ 1.12
PKNOX2-210ENST00000558729 AMOTQ4VCS5 1084 aa22.04■■□□□ 1.12
PKNOX2-210ENST00000558729 UPF1Q92900 1129 aaKnown RBP eCLIP22.04■■□□□ 1.12
PKNOX2-210ENST00000558729 PCDH11XQ9BZA7 1347 aa22.04■■□□□ 1.12
PKNOX2-210ENST00000558729 PCDH11YQ9BZA8 1340 aa22.04■■□□□ 1.12
PKNOX2-210ENST00000558729 CCDC125Q86Z20 511 aa22.03■■□□□ 1.12
PKNOX2-210ENST00000558729 MARCH10Q8NA82 808 aaPredicted RBP22.03■■□□□ 1.12
PKNOX2-210ENST00000558729 PLEKHO1Q53GL0 409 aaPredicted RBP22.02■■□□□ 1.12
PKNOX2-210ENST00000558729 AEBP1Q8IUX7 1158 aa22.02■■□□□ 1.12
PKNOX2-210ENST00000558729 U2AF1L5P0DN76 240 aaPredicted RBP22.01■■□□□ 1.11
PKNOX2-210ENST00000558729 U2AF1Q01081 240 aaKnown RBP eCLIP22.01■■□□□ 1.11
PKNOX2-210ENST00000558729 FCHSD2O94868 740 aa22■■□□□ 1.11
PKNOX2-210ENST00000558729 DDX54Q8TDD1 881 aaKnown RBP22■■□□□ 1.11
PKNOX2-210ENST00000558729 SRCAPQ6ZRS2 3230 aa22■■□□□ 1.11
PKNOX2-210ENST00000558729 HMOX1P09601 288 aa21.99■■□□□ 1.11
PKNOX2-210ENST00000558729 PNNQ9H307 717 aaKnown RBP21.99■■□□□ 1.11
PKNOX2-210ENST00000558729 PKD1L3Q7Z443 1732 aa21.98■■□□□ 1.11
PKNOX2-210ENST00000558729 FAM182BQ5T319 152 aa21.97■■□□□ 1.11
PKNOX2-210ENST00000558729 IFNL2Q8IZJ0 200 aa21.97■■□□□ 1.11
PKNOX2-210ENST00000558729 CYP27B1O15528 508 aa21.95■■□□□ 1.1
PKNOX2-210ENST00000558729 HSP90AB1P08238 724 aaKnown RBP21.95■■□□□ 1.1
PKNOX2-210ENST00000558729 SF3B2Q13435 895 aaKnown RBP21.95■■□□□ 1.1
PKNOX2-210ENST00000558729 NKX1-1Q15270 411 aaPredicted RBP21.95■■□□□ 1.1
PKNOX2-210ENST00000558729 RSPH6AQ9H0K4 717 aa21.95■■□□□ 1.1
PKNOX2-210ENST00000558729 NEFMP07197 916 aa21.94■■□□□ 1.1
PKNOX2-210ENST00000558729 WDR43Q15061 677 aaKnown RBP eCLIP21.94■■□□□ 1.1
PKNOX2-210ENST00000558729 PHKG2P15735 406 aa21.93■■□□□ 1.1
PKNOX2-210ENST00000558729 C1orf141Q5JVX7 400 aa21.93■■□□□ 1.1
PKNOX2-210ENST00000558729 ZNF530Q6P9A1 599 aaPredicted RBP21.93■■□□□ 1.1
PKNOX2-210ENST00000558729 SHANK3Q9BYB0 1731 aa21.92■■□□□ 1.1
PKNOX2-210ENST00000558729 PRKAR2BP31323 418 aa21.92■■□□□ 1.1
PKNOX2-210ENST00000558729 GAS2L2Q8NHY3 880 aa21.92■■□□□ 1.1
PKNOX2-210ENST00000558729 BCL11BQ9C0K0 894 aaPredicted RBP21.91■■□□□ 1.1
PKNOX2-210ENST00000558729 AKAP4Q5JQC9 854 aa21.9■■□□□ 1.1
PKNOX2-210ENST00000558729 DIEXFQ68CQ4 756 aaKnown RBP21.9■■□□□ 1.1
PKNOX2-210ENST00000558729 TRIM37O94972 964 aa21.89■■□□□ 1.09
PKNOX2-210ENST00000558729 DCAF5Q96JK2 942 aa21.89■■□□□ 1.09
PKNOX2-210ENST00000558729 MTHFSDQ2M296 383 aaKnown RBP21.88■■□□□ 1.09
PKNOX2-210ENST00000558729 MRS2Q9HD23 443 aa21.88■■□□□ 1.09
PKNOX2-210ENST00000558729 MAPK8IP3Q9UPT6 1336 aa21.86■■□□□ 1.09
PKNOX2-210ENST00000558729 BAG6P46379 1132 aa21.86■■□□□ 1.09
PKNOX2-210ENST00000558729 PLEKHF1Q96S99 279 aa21.86■■□□□ 1.09
PKNOX2-210ENST00000558729 ACSBG1Q96GR2 724 aa21.85■■□□□ 1.09
PKNOX2-210ENST00000558729 PHACTR3Q96KR7 559 aa21.85■■□□□ 1.09
PKNOX2-210ENST00000558729 ERVV-2B6SEH9 535 aa21.84■■□□□ 1.09
PKNOX2-210ENST00000558729 NHSQ6T4R5 1651 aa21.84■■□□□ 1.09
PKNOX2-210ENST00000558729 APBA3O96018 575 aa21.83■■□□□ 1.09
PKNOX2-210ENST00000558729 PRIM1P49642 420 aaKnown RBP21.83■■□□□ 1.09
PKNOX2-210ENST00000558729 ADAMTS8Q9UP79 889 aa21.83■■□□□ 1.09
PKNOX2-210ENST00000558729 MAP3K5Q99683 1374 aa21.83■■□□□ 1.08
PKNOX2-210ENST00000558729 SBF2Q86WG5 1849 aa21.83■■□□□ 1.08
PKNOX2-210ENST00000558729 GNAT3A8MTJ3 354 aa21.82■■□□□ 1.08
PKNOX2-210ENST00000558729 PLSCR1O15162 318 aa21.82■■□□□ 1.08
PKNOX2-210ENST00000558729 KCNQ2O43526 872 aa21.82■■□□□ 1.08
PKNOX2-210ENST00000558729 PNISRQ8TF01 805 aaKnown RBP21.82■■□□□ 1.08
PKNOX2-210ENST00000558729 SYTL4Q96C24 671 aaPredicted RBP21.82■■□□□ 1.08
PKNOX2-210ENST00000558729 CCER2I3L3R5 266 aa21.81■■□□□ 1.08
PKNOX2-210ENST00000558729 HTATSF1O43719 755 aaKnown RBP21.81■■□□□ 1.08
PKNOX2-210ENST00000558729 CCDC184Q52MB2 194 aa21.81■■□□□ 1.08
PKNOX2-210ENST00000558729 RUNDC1Q96C34 613 aa21.81■■□□□ 1.08
PKNOX2-210ENST00000558729 TNS1Q9HBL0 1735 aaKnown RBP21.8■■□□□ 1.08
PKNOX2-210ENST00000558729 TMOD3Q9NYL9 352 aa21.8■■□□□ 1.08
PKNOX2-210ENST00000558729 DOT1LQ8TEK3 1739 aa21.8■■□□□ 1.08
PKNOX2-210ENST00000558729 KDM6AO15550 1401 aaPredicted RBP21.8■■□□□ 1.08
PKNOX2-210ENST00000558729 EP400Q96L91 3159 aa21.79■■□□□ 1.08
PKNOX2-210ENST00000558729 MPRIPQ6WCQ1 1025 aa21.79■■□□□ 1.08
PKNOX2-210ENST00000558729 NFE2L2Q16236 605 aa21.78■■□□□ 1.08
PKNOX2-210ENST00000558729 RTF1Q92541 710 aaKnown RBP21.78■■□□□ 1.08
PKNOX2-210ENST00000558729 RNMTO43148 476 aaKnown RBP21.77■■□□□ 1.08
PKNOX2-210ENST00000558729 CABP4P57796 275 aa21.77■■□□□ 1.08
PKNOX2-210ENST00000558729 HMGB2P26583 209 aaKnown RBP21.76■■□□□ 1.07
PKNOX2-210ENST00000558729 PTF1AQ7RTS3 328 aa21.76■■□□□ 1.07
PKNOX2-210ENST00000558729 SMARCC1Q92922 1105 aaPredicted RBP21.76■■□□□ 1.07
PKNOX2-210ENST00000558729 LMOD3Q0VAK6 560 aa21.75■■□□□ 1.07
PKNOX2-210ENST00000558729 DEFB132Q7Z7B7 95 aa21.75■■□□□ 1.07
PKNOX2-210ENST00000558729 PIGBQ92521 554 aa21.75■■□□□ 1.07
PKNOX2-210ENST00000558729 CAMKK2Q96RR4 588 aa21.75■■□□□ 1.07
PKNOX2-210ENST00000558729 SLC52A2Q9HAB3 445 aa21.75■■□□□ 1.07
PKNOX2-210ENST00000558729 TOGARAM1Q9Y4F4 1720 aa21.75■■□□□ 1.07
PKNOX2-210ENST00000558729 RGPD3A6NKT7 1758 aaPredicted RBP21.74■■□□□ 1.07
PKNOX2-210ENST00000558729 RGPD4Q7Z3J3 1758 aa21.74■■□□□ 1.07
PKNOX2-210ENST00000558729 EN1Q05925 392 aaPredicted RBP21.74■■□□□ 1.07
PKNOX2-210ENST00000558729 MRC1P22897 1456 aa21.74■■□□□ 1.07
PKNOX2-210ENST00000558729 ADAMTS7Q9UKP4 1686 aa21.74■■□□□ 1.07
PKNOX2-210ENST00000558729 CEMIPQ8WUJ3 1361 aa21.74■■□□□ 1.07
PKNOX2-210ENST00000558729 CCDC146Q8IYE0 955 aa21.73■■□□□ 1.07
PKNOX2-210ENST00000558729 LGR6Q9HBX8 967 aa21.73■■□□□ 1.07
PKNOX2-210ENST00000558729 BTAF1O14981 1849 aa21.72■■□□□ 1.07
PKNOX2-210ENST00000558729 TMPOP42166 694 aaKnown RBP21.72■■□□□ 1.07
PKNOX2-210ENST00000558729 TEFQ10587 303 aa21.72■■□□□ 1.07
PKNOX2-210ENST00000558729 IL17REQ8NFR9 667 aa21.72■■□□□ 1.07
PKNOX2-210ENST00000558729 EZH2Q15910 746 aaKnown RBP21.71■■□□□ 1.07
PKNOX2-210ENST00000558729 SLC27A3Q5K4L6 730 aa21.71■■□□□ 1.07
PKNOX2-210ENST00000558729 NFATC2IPQ8NCF5 419 aa21.71■■□□□ 1.07
PKNOX2-210ENST00000558729 KAT6BQ8WYB5 2073 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms