RNA–Protein interactions for RNA: ENST00000558611.1

MARK3-213, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 687 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-213ENST00000558611 ELOAQ14241 798 aaKnown RBP14.94□□□□□ -0.02
MARK3-213ENST00000558611 CDCA8Q53HL2 280 aa14.94□□□□□ -0.02
MARK3-213ENST00000558611 MORN1Q5T089 497 aa14.94□□□□□ -0.02
MARK3-213ENST00000558611 B4GALNT3Q6L9W6 998 aa14.94□□□□□ -0.02
MARK3-213ENST00000558611 SND1Q7KZF4 910 aaKnown RBP eCLIP14.94□□□□□ -0.02
MARK3-213ENST00000558611 SPAG9O60271 1321 aaKnown RBP14.93□□□□□ -0.02
MARK3-213ENST00000558611 CCDC27Q2M243 656 aa14.93□□□□□ -0.02
MARK3-213ENST00000558611 LYPD8Q6UX82 237 aa14.93□□□□□ -0.02
MARK3-213ENST00000558611 PTPRMP28827 1452 aa14.93□□□□□ -0.02
MARK3-213ENST00000558611 MAST1Q9Y2H9 1570 aa14.93□□□□□ -0.02
MARK3-213ENST00000558611 NFATC2IPQ8NCF5 419 aa14.92□□□□□ -0.02
MARK3-213ENST00000558611 RBM25P49756 843 aaKnown RBP14.91□□□□□ -0.02
MARK3-213ENST00000558611 RTEL1-TNFRSF6BF6WH68 1400 aa14.91□□□□□ -0.02
MARK3-213ENST00000558611 GNEQ9Y223 722 aaKnown RBP14.9□□□□□ -0.02
MARK3-213ENST00000558611 AMOTL2Q9Y2J4 779 aa14.9□□□□□ -0.02
MARK3-213ENST00000558611 DNMT1P26358 1616 aaKnown RBP14.9□□□□□ -0.02
MARK3-213ENST00000558611 ACTN4O43707 911 aaKnown RBP14.89□□□□□ -0.03
MARK3-213ENST00000558611 NBPF3Q9H094 633 aa14.89□□□□□ -0.03
MARK3-213ENST00000558611 VPS9D1Q9Y2B5 631 aa14.89□□□□□ -0.03
MARK3-213ENST00000558611 SLC27A5Q9Y2P5 690 aa14.89□□□□□ -0.03
MARK3-213ENST00000558611 MROH2AA6NES4 1674 aa14.89□□□□□ -0.03
MARK3-213ENST00000558611 C3P01024 1663 aa14.89□□□□□ -0.03
MARK3-213ENST00000558611 FGD6Q6ZV73 1430 aa14.89□□□□□ -0.03
MARK3-213ENST00000558611 A2MP01023 1474 aa14.89□□□□□ -0.03
MARK3-213ENST00000558611 ZBBXA8MT70 800 aa14.88□□□□□ -0.03
MARK3-213ENST00000558611 DMRTA1Q5VZB9 504 aa14.88□□□□□ -0.03
MARK3-213ENST00000558611 TCOF1Q13428 1488 aaKnown RBP14.88□□□□□ -0.03
MARK3-213ENST00000558611 RNF40O75150 1001 aa14.87□□□□□ -0.03
MARK3-213ENST00000558611 FBXO45P0C2W1 286 aa14.87□□□□□ -0.03
MARK3-213ENST00000558611 PBX2P40425 430 aa14.87□□□□□ -0.03
MARK3-213ENST00000558611 POTEEQ6S8J3 1075 aa14.87□□□□□ -0.03
MARK3-213ENST00000558611 ZC3H4Q9UPT8 1303 aaKnown RBP14.87□□□□□ -0.03
MARK3-213ENST00000558611 CLTCQ00610 1675 aaKnown RBP14.87□□□□□ -0.03
MARK3-213ENST00000558611 MLECQ14165 292 aa14.86□□□□□ -0.03
MARK3-213ENST00000558611 FKBPLQ9UIM3 349 aa14.86□□□□□ -0.03
MARK3-213ENST00000558611 SHANK2Q9UPX8 1470 aa14.85□□□□□ -0.03
MARK3-213ENST00000558611 PRR14Q9BWN1 585 aa14.85□□□□□ -0.03
MARK3-213ENST00000558611 EIF2AK4Q9P2K8 1649 aaKnown RBP14.84□□□□□ -0.03
MARK3-213ENST00000558611 PREX1Q8TCU6 1659 aa14.84□□□□□ -0.03
MARK3-213ENST00000558611 ZNF428Q96B54 188 aa14.84□□□□□ -0.03
MARK3-213ENST00000558611 SALL2Q9Y467 1007 aaPredicted RBP14.84□□□□□ -0.03
MARK3-213ENST00000558611 SETD1BQ9UPS6 1966 aaKnown RBP14.84□□□□□ -0.03
MARK3-213ENST00000558611 PUS10Q3MIT2 529 aaKnown RBP14.83□□□□□ -0.04
MARK3-213ENST00000558611 PLEKHM2Q8IWE5 1019 aa14.83□□□□□ -0.04
MARK3-213ENST00000558611 ZFRQ96KR1 1074 aaKnown RBP14.83□□□□□ -0.04
MARK3-213ENST00000558611 RNF17Q9BXT8 1623 aaKnown RBP14.81□□□□□ -0.04
MARK3-213ENST00000558611 BHMG1C9JSJ3 638 aaPredicted RBP14.81□□□□□ -0.04
MARK3-213ENST00000558611 E9PSI1 815 aa14.81□□□□□ -0.04
MARK3-213ENST00000558611 USB1Q9BQ65 265 aaKnown RBP14.81□□□□□ -0.04
MARK3-213ENST00000558611 ZMIZ1Q9ULJ6 1067 aa14.81□□□□□ -0.04
MARK3-213ENST00000558611 DAPK1P53355 1430 aa14.81□□□□□ -0.04
MARK3-213ENST00000558611 USP17L3A6NCW0 530 aa14.8□□□□□ -0.04
MARK3-213ENST00000558611 USP17L4A6NCW7 530 aa14.8□□□□□ -0.04
MARK3-213ENST00000558611 PIK3CDO00329 1044 aa14.8□□□□□ -0.04
MARK3-213ENST00000558611 F12P00748 615 aaPredicted RBP14.8□□□□□ -0.04
MARK3-213ENST00000558611 TSPY4P0CV99 314 aa14.8□□□□□ -0.04
MARK3-213ENST00000558611 TSPY10P0CW01 314 aa14.8□□□□□ -0.04
MARK3-213ENST00000558611 TMEM164Q5U3C3 297 aa14.8□□□□□ -0.04
MARK3-213ENST00000558611 USP17L2Q6R6M4 530 aa14.8□□□□□ -0.04
MARK3-213ENST00000558611 USP17L1Q7RTZ2 530 aa14.8□□□□□ -0.04
MARK3-213ENST00000558611 ERBB3P21860 1342 aa14.8□□□□□ -0.04
MARK3-213ENST00000558611 DHX29Q7Z478 1369 aaKnown RBP14.8□□□□□ -0.04
MARK3-213ENST00000558611 ABCC5O15440 1437 aa14.79□□□□□ -0.04
MARK3-213ENST00000558611 VARS2Q5ST30 1063 aaKnown RBP14.79□□□□□ -0.04
MARK3-213ENST00000558611 ZNF592Q92610 1267 aa14.79□□□□□ -0.04
MARK3-213ENST00000558611 CNTLNQ9NXG0 1405 aa14.79□□□□□ -0.04
MARK3-213ENST00000558611 NOVA2Q9UNW9 492 aaKnown RBP14.79□□□□□ -0.04
MARK3-213ENST00000558611 AXIN2Q9Y2T1 843 aa14.79□□□□□ -0.04
MARK3-213ENST00000558611 ZC3H13Q5T200 1668 aaKnown RBP14.78□□□□□ -0.04
MARK3-213ENST00000558611 FAM135AQ9P2D6 1515 aa14.78□□□□□ -0.04
MARK3-213ENST00000558611 RNF19BQ6ZMZ0 732 aa14.78□□□□□ -0.04
MARK3-213ENST00000558611 CCER1Q8TC90 406 aaPredicted RBP14.78□□□□□ -0.04
MARK3-213ENST00000558611 DUOX2Q9NRD8 1548 aa14.77□□□□□ -0.04
MARK3-213ENST00000558611 FAM196BA6NMK8 535 aa14.77□□□□□ -0.05
MARK3-213ENST00000558611 USP17L5A8MUK1 530 aa14.77□□□□□ -0.05
MARK3-213ENST00000558611 SKIP12755 728 aa14.77□□□□□ -0.05
MARK3-213ENST00000558611 BRICD5Q6PL45 260 aa14.77□□□□□ -0.05
MARK3-213ENST00000558611 LRCH3Q96II8 777 aa14.77□□□□□ -0.05
MARK3-213ENST00000558611 CEP152O94986 1710 aa14.77□□□□□ -0.05
MARK3-213ENST00000558611 PTPRNQ16849 979 aa14.76□□□□□ -0.05
MARK3-213ENST00000558611 BLOC1S3Q6QNY0 202 aa14.76□□□□□ -0.05
MARK3-213ENST00000558611 STK32AQ8WU08 396 aa14.76□□□□□ -0.05
MARK3-213ENST00000558611 LMTK3Q96Q04 1460 aa14.76□□□□□ -0.05
MARK3-213ENST00000558611 DEPDC5O75140 1603 aa14.75□□□□□ -0.05
MARK3-213ENST00000558611 MROH1Q8NDA8 1641 aa14.75□□□□□ -0.05
MARK3-213ENST00000558611 MCCD1P59942 119 aaPredicted RBP14.75□□□□□ -0.05
MARK3-213ENST00000558611 TXNDC2Q86VQ3 553 aa14.75□□□□□ -0.05
MARK3-213ENST00000558611 GPSM3Q9Y4H4 160 aa14.75□□□□□ -0.05
MARK3-213ENST00000558611 KDM5DQ9BY66 1539 aa14.75□□□□□ -0.05
MARK3-213ENST00000558611 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.74□□□□□ -0.05
MARK3-213ENST00000558611 ADGRL2O95490 1459 aa14.74□□□□□ -0.05
MARK3-213ENST00000558611 TK2O00142 265 aa14.73□□□□□ -0.05
MARK3-213ENST00000558611 JUNDP17535 347 aa14.73□□□□□ -0.05
MARK3-213ENST00000558611 ESF1Q9H501 851 aaKnown RBP14.73□□□□□ -0.05
MARK3-213ENST00000558611 ZNF142P52746 1687 aaPredicted RBP14.72□□□□□ -0.05
MARK3-213ENST00000558611 LZTS3O60299 673 aaPredicted RBP14.72□□□□□ -0.05
MARK3-213ENST00000558611 MRPL50Q8N5N7 158 aaKnown RBP14.72□□□□□ -0.05
MARK3-213ENST00000558611 FAM174AQ8TBP5 190 aa14.72□□□□□ -0.05
MARK3-213ENST00000558611 CFAP65Q6ZU64 1925 aaKnown RBP14.72□□□□□ -0.05
MARK3-213ENST00000558611 KIF15Q9NS87 1388 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms