RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 USHBP1Q8N6Y0 703 aa14.03□□□□□ -0.16
TPM1-212ENST00000558347 SMG6Q86US8 1419 aaKnown RBP14.03□□□□□ -0.16
TPM1-212ENST00000558347 KIF24Q5T7B8 1368 aa14.02□□□□□ -0.16
TPM1-212ENST00000558347 MAP2P11137 1827 aaKnown RBP14.02□□□□□ -0.16
TPM1-212ENST00000558347 KIF7Q2M1P5 1343 aa14.02□□□□□ -0.16
TPM1-212ENST00000558347 PROM2Q8N271 834 aa14.02□□□□□ -0.16
TPM1-212ENST00000558347 PANK3Q9H999 370 aa14.02□□□□□ -0.16
TPM1-212ENST00000558347 DDX54Q8TDD1 881 aaKnown RBP14.01□□□□□ -0.17
TPM1-212ENST00000558347 BTAF1O14981 1849 aa14.01□□□□□ -0.17
TPM1-212ENST00000558347 NBPF14Q5TI25 921 aa14□□□□□ -0.17
TPM1-212ENST00000558347 PPM1GO15355 546 aaPredicted RBP14□□□□□ -0.17
TPM1-212ENST00000558347 ANO8Q9HCE9 1232 aaPredicted RBP13.99□□□□□ -0.17
TPM1-212ENST00000558347 POLKQ9UBT6 870 aa13.99□□□□□ -0.17
TPM1-212ENST00000558347 DOT1LQ8TEK3 1739 aa13.98□□□□□ -0.17
TPM1-212ENST00000558347 TNNT2P45379 298 aaPredicted RBP13.98□□□□□ -0.17
TPM1-212ENST00000558347 DDX10Q13206 875 aaKnown RBP13.98□□□□□ -0.17
TPM1-212ENST00000558347 TXNRD1Q16881 649 aa13.98□□□□□ -0.17
TPM1-212ENST00000558347 ZCRB1Q8TBF4 217 aaKnown RBP13.98□□□□□ -0.17
TPM1-212ENST00000558347 KAT6BQ8WYB5 2073 aa13.98□□□□□ -0.17
TPM1-212ENST00000558347 CCER2I3L3R5 266 aa13.97□□□□□ -0.17
TPM1-212ENST00000558347 NCAPD2Q15021 1401 aa13.97□□□□□ -0.17
TPM1-212ENST00000558347 RAPGEF4Q8WZA2 1011 aa13.96□□□□□ -0.17
TPM1-212ENST00000558347 TATP17735 454 aaPredicted RBP13.95□□□□□ -0.18
TPM1-212ENST00000558347 NSD2O96028 1365 aa13.95□□□□□ -0.18
TPM1-212ENST00000558347 CASZ1Q86V15 1759 aa13.94□□□□□ -0.18
TPM1-212ENST00000558347 PKD1L3Q7Z443 1732 aa13.94□□□□□ -0.18
TPM1-212ENST00000558347 PAPPAQ13219 1627 aa13.94□□□□□ -0.18
TPM1-212ENST00000558347 EYA1Q99502 592 aa13.94□□□□□ -0.18
TPM1-212ENST00000558347 PRIM1P49642 420 aaKnown RBP13.93□□□□□ -0.18
TPM1-212ENST00000558347 SYTL4Q96C24 671 aaPredicted RBP13.93□□□□□ -0.18
TPM1-212ENST00000558347 PDGFDQ9GZP0 370 aaPredicted RBP13.93□□□□□ -0.18
TPM1-212ENST00000558347 EIF4A2Q14240 407 aaKnown RBP13.92□□□□□ -0.18
TPM1-212ENST00000558347 LRRC4BQ9NT99 713 aa13.92□□□□□ -0.18
TPM1-212ENST00000558347 KNSTRNQ9Y448 316 aa13.92□□□□□ -0.18
TPM1-212ENST00000558347 PCDH11XQ9BZA7 1347 aa13.92□□□□□ -0.18
TPM1-212ENST00000558347 PCDH11YQ9BZA8 1340 aa13.92□□□□□ -0.18
TPM1-212ENST00000558347 CYP27B1O15528 508 aa13.91□□□□□ -0.18
TPM1-212ENST00000558347 SLC15A2Q16348 729 aa13.91□□□□□ -0.18
TPM1-212ENST00000558347 AMER1Q5JTC6 1135 aaPredicted RBP13.91□□□□□ -0.18
TPM1-212ENST00000558347 MORC1Q86VD1 984 aa13.91□□□□□ -0.18
TPM1-212ENST00000558347 STK32BQ9NY57 414 aa13.91□□□□□ -0.18
TPM1-212ENST00000558347 TOGARAM1Q9Y4F4 1720 aa13.91□□□□□ -0.18
TPM1-212ENST00000558347 LY75O60449 1722 aa13.9□□□□□ -0.18
TPM1-212ENST00000558347 ANP32CO43423 234 aa13.9□□□□□ -0.19
TPM1-212ENST00000558347 PER1O15534 1290 aaPredicted RBP13.89□□□□□ -0.19
TPM1-212ENST00000558347 ZNF827Q17R98 1081 aa13.89□□□□□ -0.19
TPM1-212ENST00000558347 SPON1Q9HCB6 807 aa13.89□□□□□ -0.19
TPM1-212ENST00000558347 SUPT16HQ9Y5B9 1047 aaKnown RBP13.89□□□□□ -0.19
TPM1-212ENST00000558347 IGSF1Q8N6C5 1336 aa13.89□□□□□ -0.19
TPM1-212ENST00000558347 KCNQ4P56696 695 aa13.88□□□□□ -0.19
TPM1-212ENST00000558347 ITGB4P16144 1822 aa13.88□□□□□ -0.19
TPM1-212ENST00000558347 ZBTB7AO95365 584 aa13.86□□□□□ -0.19
TPM1-212ENST00000558347 SLC27A3Q5K4L6 730 aa13.86□□□□□ -0.19
TPM1-212ENST00000558347 SPG7Q9UQ90 795 aa13.86□□□□□ -0.19
TPM1-212ENST00000558347 TUBGCP6Q96RT7 1819 aa13.85□□□□□ -0.19
TPM1-212ENST00000558347 NKX1-1Q15270 411 aaPredicted RBP13.85□□□□□ -0.19
TPM1-212ENST00000558347 AKT1S1Q96B36 256 aa13.85□□□□□ -0.19
TPM1-212ENST00000558347 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.85□□□□□ -0.195e-8■■■■□ 19.9
TPM1-212ENST00000558347 CC2D1BQ5T0F9 858 aaKnown RBP13.85□□□□□ -0.19
TPM1-212ENST00000558347 MPRIPQ6WCQ1 1025 aa13.85□□□□□ -0.19
TPM1-212ENST00000558347 QSER1Q2KHR3 1735 aa13.84□□□□□ -0.19
TPM1-212ENST00000558347 PHKG2P15735 406 aa13.84□□□□□ -0.19
TPM1-212ENST00000558347 PTGER2P43116 358 aa13.84□□□□□ -0.19
TPM1-212ENST00000558347 AEBP1Q8IUX7 1158 aa13.84□□□□□ -0.19
TPM1-212ENST00000558347 CCNL1Q9UK58 526 aaPredicted RBP13.84□□□□□ -0.19
TPM1-212ENST00000558347 ATF5Q9Y2D1 282 aaPredicted RBP13.84□□□□□ -0.19
TPM1-212ENST00000558347 PLEKHG2Q9H7P9 1386 aa13.83□□□□□ -0.2
TPM1-212ENST00000558347 IFNL2Q8IZJ0 200 aa13.83□□□□□ -0.2
TPM1-212ENST00000558347 PPP1R1BQ9UD71 204 aaPredicted RBP13.83□□□□□ -0.2
TPM1-212ENST00000558347 IL13P35225 146 aa13.82□□□□□ -0.2
TPM1-212ENST00000558347 PIGBQ92521 554 aa13.82□□□□□ -0.2
TPM1-212ENST00000558347 C5P01031 1676 aa13.82□□□□□ -0.2
TPM1-212ENST00000558347 PALLDQ8WX93 1383 aa13.82□□□□□ -0.2
TPM1-212ENST00000558347 PNPLA7Q6ZV29 1317 aa13.81□□□□□ -0.2
TPM1-212ENST00000558347 MTHFSP49914 203 aa13.81□□□□□ -0.2
TPM1-212ENST00000558347 MTFR1LQ9H019 292 aa13.81□□□□□ -0.2
TPM1-212ENST00000558347 TAF1LQ8IZX4 1826 aa13.81□□□□□ -0.2
TPM1-212ENST00000558347 CNGB1Q14028 1251 aaPredicted RBP13.8□□□□□ -0.2
TPM1-212ENST00000558347 SULT6B1Q6IMI4 303 aa13.8□□□□□ -0.2
TPM1-212ENST00000558347 SGIP1Q9BQI5 828 aa13.8□□□□□ -0.2
TPM1-212ENST00000558347 KDRP35968 1356 aa13.8□□□□□ -0.2
TPM1-212ENST00000558347 NPC1L1Q9UHC9 1359 aa13.8□□□□□ -0.2
TPM1-212ENST00000558347 TFCP2L1Q9NZI6 479 aa13.8□□□□□ -0.2
TPM1-212ENST00000558347 PLEKHO1Q53GL0 409 aaPredicted RBP13.79□□□□□ -0.2
TPM1-212ENST00000558347 TMOD3Q9NYL9 352 aa13.79□□□□□ -0.2
TPM1-212ENST00000558347 KDM6AO15550 1401 aaPredicted RBP13.78□□□□□ -0.2
TPM1-212ENST00000558347 ZNF530Q6P9A1 599 aaPredicted RBP13.78□□□□□ -0.2
TPM1-212ENST00000558347 SMARCC1Q92922 1105 aaPredicted RBP13.78□□□□□ -0.2
TPM1-212ENST00000558347 COL24A1Q17RW2 1714 aa13.77□□□□□ -0.2
TPM1-212ENST00000558347 AMOTQ4VCS5 1084 aa13.77□□□□□ -0.21
TPM1-212ENST00000558347 PRKRIP1Q9H875 184 aaPredicted RBP13.77□□□□□ -0.21
TPM1-212ENST00000558347 ASAP1Q9ULH1 1129 aa13.77□□□□□ -0.21
TPM1-212ENST00000558347 C4BP0C0L5 1744 aa13.77□□□□□ -0.21
TPM1-212ENST00000558347 COL3A1P02461 1466 aaPredicted RBP13.76□□□□□ -0.21
TPM1-212ENST00000558347 SLC16A10Q8TF71 515 aa13.75□□□□□ -0.21
TPM1-212ENST00000558347 DCAF5Q96JK2 942 aa13.75□□□□□ -0.21
TPM1-212ENST00000558347 ATG3Q9NT62 314 aa13.75□□□□□ -0.21
TPM1-212ENST00000558347 LOC102724428A0A0B4J2F2 783 aa13.74□□□□□ -0.21
TPM1-212ENST00000558347 DIAPH1O60610 1272 aaKnown RBP13.74□□□□□ -0.21
TPM1-212ENST00000558347 HSP90AB1P08238 724 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms