RNA–Protein interactions for RNA: ENST00000558131.1

RPL28-205, Transcript of ribosomal protein L28, humanhuman

TSL 5 BASIC

Gene RPL28, Length 444 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-205ENST00000558131 PPP1R1BQ9UD71 204 aaPredicted RBP22.91■■□□□ 1.26
RPL28-205ENST00000558131 CARD14Q9BXL6 1004 aa22.9■■□□□ 1.26
RPL28-205ENST00000558131 NSD3Q9BZ95 1437 aa22.9■■□□□ 1.26
RPL28-205ENST00000558131 NBPF6Q5VWK0 638 aa22.89■■□□□ 1.25
RPL28-205ENST00000558131 DDX54Q8TDD1 881 aaKnown RBP22.89■■□□□ 1.25
RPL28-205ENST00000558131 NBPF4Q96M43 638 aa22.89■■□□□ 1.25
RPL28-205ENST00000558131 NCAPD2Q15021 1401 aa22.89■■□□□ 1.25
RPL28-205ENST00000558131 INSRP06213 1382 aa22.89■■□□□ 1.25
RPL28-205ENST00000558131 MAP2P11137 1827 aaKnown RBP22.88■■□□□ 1.25
RPL28-205ENST00000558131 GOLGB1Q14789 3259 aaKnown RBP22.88■■□□□ 1.25
RPL28-205ENST00000558131 FLT4P35916 1363 aa22.88■■□□□ 1.25
RPL28-205ENST00000558131 KIF24Q5T7B8 1368 aa22.88■■□□□ 1.25
RPL28-205ENST00000558131 C5P01031 1676 aa22.87■■□□□ 1.25
RPL28-205ENST00000558131 ITGB4P16144 1822 aa22.87■■□□□ 1.25
RPL28-205ENST00000558131 ATF5Q9Y2D1 282 aaPredicted RBP22.87■■□□□ 1.25
RPL28-205ENST00000558131 TAF1LQ8IZX4 1826 aa22.87■■□□□ 1.25
RPL28-205ENST00000558131 SMG6Q86US8 1419 aaKnown RBP22.86■■□□□ 1.25
RPL28-205ENST00000558131 USHBP1Q8N6Y0 703 aa22.86■■□□□ 1.25
RPL28-205ENST00000558131 HSP90AB2PQ58FF8 381 aa22.85■■□□□ 1.25
RPL28-205ENST00000558131 AKT1S1Q96B36 256 aa22.85■■□□□ 1.25
RPL28-205ENST00000558131 MTFR1LQ9H019 292 aa22.85■■□□□ 1.25
RPL28-205ENST00000558131 TIMELESSQ9UNS1 1208 aa22.85■■□□□ 1.25
RPL28-205ENST00000558131 CLSPNQ9HAW4 1339 aa22.84■■□□□ 1.25
RPL28-205ENST00000558131 CDCA8Q53HL2 280 aa22.84■■□□□ 1.25
RPL28-205ENST00000558131 ZCRB1Q8TBF4 217 aaKnown RBP22.84■■□□□ 1.25
RPL28-205ENST00000558131 PRIM1P49642 420 aaKnown RBP22.82■■□□□ 1.24
RPL28-205ENST00000558131 SLC27A3Q5K4L6 730 aa22.81■■□□□ 1.24
RPL28-205ENST00000558131 CGNL1Q0VF96 1302 aa22.81■■□□□ 1.24
RPL28-205ENST00000558131 EMILIN1Q9Y6C2 1016 aa22.8■■□□□ 1.24
RPL28-205ENST00000558131 PNPLA7Q6ZV29 1317 aa22.8■■□□□ 1.24
RPL28-205ENST00000558131 KCNQ4P56696 695 aa22.79■■□□□ 1.24
RPL28-205ENST00000558131 FHDC1Q9C0D6 1143 aaPredicted RBP22.79■■□□□ 1.24
RPL28-205ENST00000558131 MAP3K5Q99683 1374 aa22.78■■□□□ 1.24
RPL28-205ENST00000558131 SYTL4Q96C24 671 aaPredicted RBP22.78■■□□□ 1.24
RPL28-205ENST00000558131 SYT17Q9BSW7 474 aa22.77■■□□□ 1.24
RPL28-205ENST00000558131 YY1P25490 414 aa22.76■■□□□ 1.23
RPL28-205ENST00000558131 CHD4Q14839 1912 aa22.76■■□□□ 1.23
RPL28-205ENST00000558131 RAPGEF4Q8WZA2 1011 aa22.75■■□□□ 1.23
RPL28-205ENST00000558131 PCDH11XQ9BZA7 1347 aa22.75■■□□□ 1.23
RPL28-205ENST00000558131 PCDH11YQ9BZA8 1340 aa22.75■■□□□ 1.23
RPL28-205ENST00000558131 CYP27B1O15528 508 aa22.74■■□□□ 1.23
RPL28-205ENST00000558131 C4BP0C0L5 1744 aa22.74■■□□□ 1.23
RPL28-205ENST00000558131 TATP17735 454 aaPredicted RBP22.73■■□□□ 1.23
RPL28-205ENST00000558131 ARXQ96QS3 562 aa22.73■■□□□ 1.23
RPL28-205ENST00000558131 UBR3Q6ZT12 1888 aa22.73■■□□□ 1.23
RPL28-205ENST00000558131 PCGF6Q9BYE7 350 aa22.72■■□□□ 1.23
RPL28-205ENST00000558131 WASHC2AQ641Q2 1341 aa22.71■■□□□ 1.23
RPL28-205ENST00000558131 SLC16A10Q8TF71 515 aa22.7■■□□□ 1.22
RPL28-205ENST00000558131 CCNL1Q9UK58 526 aaPredicted RBP22.7■■□□□ 1.22
RPL28-205ENST00000558131 POLKQ9UBT6 870 aa22.68■■□□□ 1.22
RPL28-205ENST00000558131 PALLDQ8WX93 1383 aa22.67■■□□□ 1.22
RPL28-205ENST00000558131 TFCP2L1Q9NZI6 479 aa22.67■■□□□ 1.22
RPL28-205ENST00000558131 EYA1Q99502 592 aa22.66■■□□□ 1.22
RPL28-205ENST00000558131 HSPA5P11021 654 aaKnown RBP22.65■■□□□ 1.22
RPL28-205ENST00000558131 NKX1-1Q15270 411 aaPredicted RBP22.65■■□□□ 1.22
RPL28-205ENST00000558131 DCAF8L1A6NGE4 600 aa22.64■■□□□ 1.21
RPL28-205ENST00000558131 ZNF831Q5JPB2 1677 aa22.63■■□□□ 1.21
RPL28-205ENST00000558131 PPM1GO15355 546 aaPredicted RBP22.63■■□□□ 1.21
RPL28-205ENST00000558131 COL23A1Q86Y22 540 aaPredicted RBP22.63■■□□□ 1.21
RPL28-205ENST00000558131 MPRIPQ6WCQ1 1025 aa22.62■■□□□ 1.21
RPL28-205ENST00000558131 PLEKHG2Q9H7P9 1386 aa22.62■■□□□ 1.21
RPL28-205ENST00000558131 COL5A3P25940 1745 aaPredicted RBP22.61■■□□□ 1.21
RPL28-205ENST00000558131 EIF4G2P78344 907 aaKnown RBP eCLIP22.61■■□□□ 1.21
RPL28-205ENST00000558131 EIF4A2Q14240 407 aaKnown RBP22.61■■□□□ 1.21
RPL28-205ENST00000558131 AMIGO3Q86WK7 504 aa22.61■■□□□ 1.21
RPL28-205ENST00000558131 PIGBQ92521 554 aa22.59■■□□□ 1.21
RPL28-205ENST00000558131 POLR3GLQ9BT43 218 aa22.59■■□□□ 1.21
RPL28-205ENST00000558131 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.59■■□□□ 1.21
RPL28-205ENST00000558131 IGSF1Q8N6C5 1336 aa22.58■■□□□ 1.21
RPL28-205ENST00000558131 POLD1P28340 1107 aa22.58■■□□□ 1.21
RPL28-205ENST00000558131 NLGN2Q8NFZ4 835 aa22.58■■□□□ 1.21
RPL28-205ENST00000558131 TNNT2P45379 298 aaPredicted RBP22.57■■□□□ 1.2
RPL28-205ENST00000558131 PANK3Q9H999 370 aa22.57■■□□□ 1.2
RPL28-205ENST00000558131 SPG7Q9UQ90 795 aa22.57■■□□□ 1.2
RPL28-205ENST00000558131 PHKG2P15735 406 aa22.56■■□□□ 1.2
RPL28-205ENST00000558131 ZNF784Q8NCA9 323 aaPredicted RBP22.55■■□□□ 1.2
RPL28-205ENST00000558131 KDRP35968 1356 aa22.54■■□□□ 1.2
RPL28-205ENST00000558131 MSL1Q68DK7 614 aa22.54■■□□□ 1.2
RPL28-205ENST00000558131 VIRMAQ69YN4 1812 aaKnown RBP22.54■■□□□ 1.2
RPL28-205ENST00000558131 CICQ96RK0 1608 aaPredicted RBP22.53■■□□□ 1.2
RPL28-205ENST00000558131 SMARCC1Q92922 1105 aaPredicted RBP22.53■■□□□ 1.2
RPL28-205ENST00000558131 KDM6AO15550 1401 aaPredicted RBP22.53■■□□□ 1.2
RPL28-205ENST00000558131 KIAA1551Q9HCM1 1747 aa22.52■■□□□ 1.2
RPL28-205ENST00000558131 SMIM5Q71RC9 77 aa22.52■■□□□ 1.2
RPL28-205ENST00000558131 IFNL2Q8IZJ0 200 aa22.52■■□□□ 1.2
RPL28-205ENST00000558131 KLHL34Q8N239 644 aa22.52■■□□□ 1.2
RPL28-205ENST00000558131 LINC00116Q8NCU8 138 aa22.52■■□□□ 1.2
RPL28-205ENST00000558131 SCN11AQ9UI33 1791 aa22.52■■□□□ 1.2
RPL28-205ENST00000558131 C4AP0C0L4 1744 aa22.51■■□□□ 1.19
RPL28-205ENST00000558131 ASAP1Q9ULH1 1129 aa22.51■■□□□ 1.19
RPL28-205ENST00000558131 KIF13BQ9NQT8 1826 aa22.5■■□□□ 1.19
RPL28-205ENST00000558131 LOC102724428A0A0B4J2F2 783 aa22.5■■□□□ 1.19
RPL28-205ENST00000558131 MSH5O43196 834 aa22.5■■□□□ 1.19
RPL28-205ENST00000558131 SIK1P57059 783 aa22.5■■□□□ 1.19
RPL28-205ENST00000558131 ITPK1Q13572 414 aa22.5■■□□□ 1.19
RPL28-205ENST00000558131 CCER1Q8TC90 406 aaPredicted RBP22.5■■□□□ 1.19
RPL28-205ENST00000558131 TJP1Q07157 1748 aa22.5■■□□□ 1.19
RPL28-205ENST00000558131 TMOD3Q9NYL9 352 aa22.49■■□□□ 1.19
RPL28-205ENST00000558131 ATG3Q9NT62 314 aa22.48■■□□□ 1.19
RPL28-205ENST00000558131 MYH14Q7Z406 1995 aaKnown RBP22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms