RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 EXOC6Q8TAG9 804 aa26.4■■□□□ 1.82
SNRPA1-205ENST00000558036 MAP3K5Q99683 1374 aa26.38■■□□□ 1.81
SNRPA1-205ENST00000558036 CRB1P82279 1406 aa26.38■■□□□ 1.81
SNRPA1-205ENST00000558036 CAMTA1Q9Y6Y1 1673 aa26.38■■□□□ 1.81
SNRPA1-205ENST00000558036 PPP4R2Q9NY27 417 aa26.38■■□□□ 1.81
SNRPA1-205ENST00000558036 MIS18AQ9NYP9 233 aa26.38■■□□□ 1.81
SNRPA1-205ENST00000558036 ABCC6O95255 1503 aa26.37■■□□□ 1.81
SNRPA1-205ENST00000558036 UBAP1LF5GYI3 381 aa26.37■■□□□ 1.81
SNRPA1-205ENST00000558036 ELL2O00472 640 aaPredicted RBP26.36■■□□□ 1.81
SNRPA1-205ENST00000558036 TSPYL6Q8N831 410 aa26.36■■□□□ 1.81
SNRPA1-205ENST00000558036 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.36■■□□□ 1.81
SNRPA1-205ENST00000558036 FRAT1Q92837 279 aaPredicted RBP26.36■■□□□ 1.81
SNRPA1-205ENST00000558036 LMO7Q8WWI1 1683 aa26.36■■□□□ 1.81
SNRPA1-205ENST00000558036 IL17REQ8NFR9 667 aa26.36■■□□□ 1.81
SNRPA1-205ENST00000558036 B4GALNT3Q6L9W6 998 aa26.35■■□□□ 1.81
SNRPA1-205ENST00000558036 CT47B1P0C2W7 299 aaPredicted RBP26.35■■□□□ 1.81
SNRPA1-205ENST00000558036 PLEKHO1Q53GL0 409 aaPredicted RBP26.35■■□□□ 1.81
SNRPA1-205ENST00000558036 ZNF530Q6P9A1 599 aaPredicted RBP26.35■■□□□ 1.81
SNRPA1-205ENST00000558036 CRBNQ96SW2 442 aa26.35■■□□□ 1.81
SNRPA1-205ENST00000558036 CHL1O00533 1208 aa26.34■■□□□ 1.81
SNRPA1-205ENST00000558036 HTATSF1O43719 755 aaKnown RBP26.33■■□□□ 1.81
SNRPA1-205ENST00000558036 C8orf58Q8NAV2 365 aa26.33■■□□□ 1.81
SNRPA1-205ENST00000558036 CANXP27824 592 aaKnown RBP26.33■■□□□ 1.81
SNRPA1-205ENST00000558036 SSH1Q8WYL5 1049 aa26.33■■□□□ 1.81
SNRPA1-205ENST00000558036 RAPGEF4Q8WZA2 1011 aa26.32■■□□□ 1.8
SNRPA1-205ENST00000558036 STRN4Q9NRL3 753 aa26.32■■□□□ 1.8
SNRPA1-205ENST00000558036 COL5A2P05997 1499 aaPredicted RBP26.32■■□□□ 1.8
SNRPA1-205ENST00000558036 KRT24Q2M2I5 525 aa26.32■■□□□ 1.8
SNRPA1-205ENST00000558036 AMOTQ4VCS5 1084 aa26.32■■□□□ 1.8
SNRPA1-205ENST00000558036 SMC4Q9NTJ3 1288 aa26.32■■□□□ 1.8
SNRPA1-205ENST00000558036 FAM208AQ9UK61 1670 aaKnown RBP26.31■■□□□ 1.8
SNRPA1-205ENST00000558036 WDR17Q8IZU2 1322 aa26.3■■□□□ 1.8
SNRPA1-205ENST00000558036 LGR6Q9HBX8 967 aa26.3■■□□□ 1.8
SNRPA1-205ENST00000558036 PHLPP1O60346 1717 aa26.3■■□□□ 1.8
SNRPA1-205ENST00000558036 MEGF6O75095 1541 aa26.3■■□□□ 1.8
SNRPA1-205ENST00000558036 TOM1L2Q6ZVM7 507 aa26.3■■□□□ 1.8
SNRPA1-205ENST00000558036 COL16A1Q07092 1604 aaPredicted RBP26.29■■□□□ 1.8
SNRPA1-205ENST00000558036 VAMP4O75379 141 aa26.29■■□□□ 1.8
SNRPA1-205ENST00000558036 MPRIPQ6WCQ1 1025 aa26.29■■□□□ 1.8
SNRPA1-205ENST00000558036 TWISTNBQ3B726 338 aaPredicted RBP26.29■■□□□ 1.8
SNRPA1-205ENST00000558036 AKAP4Q5JQC9 854 aa26.29■■□□□ 1.8
SNRPA1-205ENST00000558036 TSPYL4Q9UJ04 414 aa26.29■■□□□ 1.8
SNRPA1-205ENST00000558036 TNNQ9UQP3 1299 aa26.29■■□□□ 1.8
SNRPA1-205ENST00000558036 TATP17735 454 aaPredicted RBP26.27■■□□□ 1.8
SNRPA1-205ENST00000558036 TCERG1O14776 1098 aaKnown RBP26.27■■□□□ 1.8
SNRPA1-205ENST00000558036 C1orf141Q5JVX7 400 aa26.27■■□□□ 1.8
SNRPA1-205ENST00000558036 LARP1Q6PKG0 1096 aaKnown RBP26.27■■□□□ 1.8
SNRPA1-205ENST00000558036 LRRC37A3O60309 1634 aa26.26■■□□□ 1.8
SNRPA1-205ENST00000558036 EVA1CP58658 441 aa26.26■■□□□ 1.79
SNRPA1-205ENST00000558036 PANK1Q8TE04 598 aa26.26■■□□□ 1.79
SNRPA1-205ENST00000558036 BTG4Q9NY30 223 aa26.26■■□□□ 1.79
SNRPA1-205ENST00000558036 CEMIPQ8WUJ3 1361 aa26.25■■□□□ 1.79
SNRPA1-205ENST00000558036 COL22A1Q8NFW1 1626 aaPredicted RBP26.25■■□□□ 1.79
SNRPA1-205ENST00000558036 ADAMTS2O95450 1211 aa26.23■■□□□ 1.79
SNRPA1-205ENST00000558036 CLUAP1Q96AJ1 413 aa26.23■■□□□ 1.79
SNRPA1-205ENST00000558036 CCDC136Q96JN2 1154 aa26.23■■□□□ 1.79
SNRPA1-205ENST00000558036 TAF7Q15545 349 aaPredicted RBP26.23■■□□□ 1.79
SNRPA1-205ENST00000558036 USP35Q9P2H5 1018 aa26.22■■□□□ 1.79
SNRPA1-205ENST00000558036 RLBP1P12271 317 aa26.21■■□□□ 1.79
SNRPA1-205ENST00000558036 ALDH1L2Q3SY69 923 aa26.21■■□□□ 1.79
SNRPA1-205ENST00000558036 NOB1Q9ULX3 412 aaKnown RBP26.21■■□□□ 1.79
SNRPA1-205ENST00000558036 NUTM2BA6NNL0 878 aaPredicted RBP26.21■■□□□ 1.79
SNRPA1-205ENST00000558036 NUTM2EB1AL46 878 aaPredicted RBP26.21■■□□□ 1.79
SNRPA1-205ENST00000558036 PDE3AQ14432 1141 aa26.21■■□□□ 1.79
SNRPA1-205ENST00000558036 NUTM2AQ8IVF1 878 aaPredicted RBP26.21■■□□□ 1.79
SNRPA1-205ENST00000558036 CERKQ8TCT0 537 aa26.21■■□□□ 1.79
SNRPA1-205ENST00000558036 SPG7Q9UQ90 795 aa26.2■■□□□ 1.79
SNRPA1-205ENST00000558036 RNMTO43148 476 aaKnown RBP26.2■■□□□ 1.78
SNRPA1-205ENST00000558036 CARD10Q9BWT7 1032 aa26.2■■□□□ 1.78
SNRPA1-205ENST00000558036 COG6Q9Y2V7 657 aa26.2■■□□□ 1.78
SNRPA1-205ENST00000558036 ZKSCAN2Q63HK3 967 aa26.19■■□□□ 1.78
SNRPA1-205ENST00000558036 ZNF428Q96B54 188 aa26.19■■□□□ 1.78
SNRPA1-205ENST00000558036 TEFQ10587 303 aa26.18■■□□□ 1.78
SNRPA1-205ENST00000558036 TRIM27P14373 513 aa26.17■■□□□ 1.78
SNRPA1-205ENST00000558036 PHKG2P15735 406 aa26.17■■□□□ 1.78
SNRPA1-205ENST00000558036 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.17■■□□□ 1.78
SNRPA1-205ENST00000558036 CYP27B1O15528 508 aa26.17■■□□□ 1.78
SNRPA1-205ENST00000558036 MRPL50Q8N5N7 158 aaKnown RBP26.17■■□□□ 1.78
SNRPA1-205ENST00000558036 OVOS2A0A0G2JMS6 1433 aa26.15■■□□□ 1.78
SNRPA1-205ENST00000558036 KIF16BQ96L93 1317 aa26.15■■□□□ 1.78
SNRPA1-205ENST00000558036 COL14A1Q05707 1796 aaKnown RBP26.14■■□□□ 1.78
SNRPA1-205ENST00000558036 KCNQ3O43525 872 aa26.14■■□□□ 1.77
SNRPA1-205ENST00000558036 ATF7IPQ6VMQ6 1270 aa26.14■■□□□ 1.77
SNRPA1-205ENST00000558036 IFNL2Q8IZJ0 200 aa26.14■■□□□ 1.77
SNRPA1-205ENST00000558036 IL2RBP14784 551 aa26.13■■□□□ 1.77
SNRPA1-205ENST00000558036 FTSJ3Q8IY81 847 aaKnown RBP26.13■■□□□ 1.77
SNRPA1-205ENST00000558036 KDM6AO15550 1401 aaPredicted RBP26.13■■□□□ 1.77
SNRPA1-205ENST00000558036 BTBD11A6QL63 1104 aa26.12■■□□□ 1.77
SNRPA1-205ENST00000558036 DZIP1LQ8IYY4 767 aaKnown RBP26.12■■□□□ 1.77
SNRPA1-205ENST00000558036 BABAM1Q9NWV8 329 aa26.12■■□□□ 1.77
SNRPA1-205ENST00000558036 BRPF1P55201 1214 aaPredicted RBP26.11■■□□□ 1.77
SNRPA1-205ENST00000558036 ZCRB1Q8TBF4 217 aaKnown RBP26.11■■□□□ 1.77
SNRPA1-205ENST00000558036 PKD1L3Q7Z443 1732 aa26.1■■□□□ 1.77
SNRPA1-205ENST00000558036 IPO8O15397 1037 aaKnown RBP26.09■■□□□ 1.77
SNRPA1-205ENST00000558036 NECTIN2Q92692 538 aa26.09■■□□□ 1.77
SNRPA1-205ENST00000558036 PLEKHG2Q9H7P9 1386 aa26.08■■□□□ 1.77
SNRPA1-205ENST00000558036 PARP4Q9UKK3 1724 aaKnown RBP26.07■■□□□ 1.76
SNRPA1-205ENST00000558036 EIF4A1P60842 406 aaKnown RBP26.07■■□□□ 1.76
SNRPA1-205ENST00000558036 DDX54Q8TDD1 881 aaKnown RBP26.07■■□□□ 1.76
SNRPA1-205ENST00000558036 NFATC2IPQ8NCF5 419 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms