RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 HSP90AB2PQ58FF8 381 aa18.84■□□□□ 0.61
SNRPA1-204ENST00000558020 CARD14Q9BXL6 1004 aa18.84■□□□□ 0.61
SNRPA1-204ENST00000558020 BTAF1O14981 1849 aa18.84■□□□□ 0.61
SNRPA1-204ENST00000558020 CASZ1Q86V15 1759 aa18.83■□□□□ 0.61
SNRPA1-204ENST00000558020 FLT4P35916 1363 aa18.83■□□□□ 0.61
SNRPA1-204ENST00000558020 PTGER2P43116 358 aa18.82■□□□□ 0.6
SNRPA1-204ENST00000558020 PPM1GO15355 546 aaPredicted RBP18.81■□□□□ 0.6
SNRPA1-204ENST00000558020 LRRC4BQ9NT99 713 aa18.81■□□□□ 0.6
SNRPA1-204ENST00000558020 YY1P25490 414 aa18.8■□□□□ 0.6
SNRPA1-204ENST00000558020 USHBP1Q8N6Y0 703 aa18.8■□□□□ 0.6
SNRPA1-204ENST00000558020 SLC16A10Q8TF71 515 aa18.8■□□□□ 0.6
SNRPA1-204ENST00000558020 POLR3GLQ9BT43 218 aa18.8■□□□□ 0.6
SNRPA1-204ENST00000558020 NSD3Q9BZ95 1437 aa18.8■□□□□ 0.6
SNRPA1-204ENST00000558020 KIF20BQ96Q89 1820 aa18.79■□□□□ 0.6
SNRPA1-204ENST00000558020 EIF4G2P78344 907 aaKnown RBP eCLIP18.79■□□□□ 0.6
SNRPA1-204ENST00000558020 TFCP2L1Q9NZI6 479 aa18.79■□□□□ 0.6
SNRPA1-204ENST00000558020 MEGF6O75095 1541 aa18.79■□□□□ 0.6
SNRPA1-204ENST00000558020 RGPD2P0DJD1 1756 aa18.78■□□□□ 0.6
SNRPA1-204ENST00000558020 PCDH11XQ9BZA7 1347 aa18.78■□□□□ 0.6
SNRPA1-204ENST00000558020 PCDH11YQ9BZA8 1340 aa18.78■□□□□ 0.6
SNRPA1-204ENST00000558020 CCER1Q8TC90 406 aaPredicted RBP18.78■□□□□ 0.6
SNRPA1-204ENST00000558020 AKT1S1Q96B36 256 aa18.78■□□□□ 0.6
SNRPA1-204ENST00000558020 ARXQ96QS3 562 aa18.78■□□□□ 0.6
SNRPA1-204ENST00000558020 ZNF827Q17R98 1081 aa18.77■□□□□ 0.6
SNRPA1-204ENST00000558020 SYT17Q9BSW7 474 aa18.76■□□□□ 0.59
SNRPA1-204ENST00000558020 FHDC1Q9C0D6 1143 aaPredicted RBP18.76■□□□□ 0.59
SNRPA1-204ENST00000558020 CCNL1Q9UK58 526 aaPredicted RBP18.76■□□□□ 0.59
SNRPA1-204ENST00000558020 EMILIN1Q9Y6C2 1016 aa18.76■□□□□ 0.59
SNRPA1-204ENST00000558020 POLD1P28340 1107 aa18.75■□□□□ 0.59
SNRPA1-204ENST00000558020 SGIP1Q9BQI5 828 aa18.75■□□□□ 0.59
SNRPA1-204ENST00000558020 SPG7Q9UQ90 795 aa18.75■□□□□ 0.59
SNRPA1-204ENST00000558020 WASHC2AQ641Q2 1341 aa18.74■□□□□ 0.59
SNRPA1-204ENST00000558020 PAPPAQ13219 1627 aa18.74■□□□□ 0.59
SNRPA1-204ENST00000558020 KCNQ4P56696 695 aa18.73■□□□□ 0.59
SNRPA1-204ENST00000558020 MYOM1P52179 1685 aa18.73■□□□□ 0.59
SNRPA1-204ENST00000558020 DOT1LQ8TEK3 1739 aa18.72■□□□□ 0.59
SNRPA1-204ENST00000558020 MPRIPQ6WCQ1 1025 aa18.72■□□□□ 0.59
SNRPA1-204ENST00000558020 NSD2O96028 1365 aa18.71■□□□□ 0.59
SNRPA1-204ENST00000558020 SMARCC1Q92922 1105 aaPredicted RBP18.71■□□□□ 0.59
SNRPA1-204ENST00000558020 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.71■□□□□ 0.59
SNRPA1-204ENST00000558020 CYP27B1O15528 508 aa18.7■□□□□ 0.58
SNRPA1-204ENST00000558020 MSH5O43196 834 aa18.7■□□□□ 0.58
SNRPA1-204ENST00000558020 HSPA5P11021 654 aaKnown RBP18.7■□□□□ 0.58
SNRPA1-204ENST00000558020 SHANK3Q9BYB0 1731 aa18.7■□□□□ 0.58
SNRPA1-204ENST00000558020 POLKQ9UBT6 870 aa18.7■□□□□ 0.58
SNRPA1-204ENST00000558020 PNPLA7Q6ZV29 1317 aa18.7■□□□□ 0.58
SNRPA1-204ENST00000558020 TNNT2P45379 298 aaPredicted RBP18.69■□□□□ 0.58
SNRPA1-204ENST00000558020 FLAD1Q8NFF5 587 aa18.69■□□□□ 0.58
SNRPA1-204ENST00000558020 MAP3K5Q99683 1374 aa18.68■□□□□ 0.58
SNRPA1-204ENST00000558020 NKX1-1Q15270 411 aaPredicted RBP18.68■□□□□ 0.58
SNRPA1-204ENST00000558020 EYA1Q99502 592 aa18.68■□□□□ 0.58
SNRPA1-204ENST00000558020 PANK3Q9H999 370 aa18.68■□□□□ 0.58
SNRPA1-204ENST00000558020 LY75O60449 1722 aa18.68■□□□□ 0.58
SNRPA1-204ENST00000558020 MAP2P11137 1827 aaKnown RBP18.67■□□□□ 0.58
SNRPA1-204ENST00000558020 QSER1Q2KHR3 1735 aa18.67■□□□□ 0.58
SNRPA1-204ENST00000558020 PALLDQ8WX93 1383 aa18.66■□□□□ 0.58
SNRPA1-204ENST00000558020 IFNL2Q8IZJ0 200 aa18.65■□□□□ 0.58
SNRPA1-204ENST00000558020 KLHL34Q8N239 644 aa18.65■□□□□ 0.58
SNRPA1-204ENST00000558020 GPR162Q16538 588 aa18.64■□□□□ 0.57
SNRPA1-204ENST00000558020 TMOD3Q9NYL9 352 aa18.64■□□□□ 0.57
SNRPA1-204ENST00000558020 NCAPD2Q15021 1401 aa18.64■□□□□ 0.57
SNRPA1-204ENST00000558020 EIF4A2Q14240 407 aaKnown RBP18.63■□□□□ 0.57
SNRPA1-204ENST00000558020 MORC1Q86VD1 984 aa18.63■□□□□ 0.57
SNRPA1-204ENST00000558020 COL23A1Q86Y22 540 aaPredicted RBP18.63■□□□□ 0.57
SNRPA1-204ENST00000558020 PIGBQ92521 554 aa18.63■□□□□ 0.57
SNRPA1-204ENST00000558020 KNSTRNQ9Y448 316 aa18.63■□□□□ 0.57
SNRPA1-204ENST00000558020 ANKRD26Q9UPS8 1709 aa18.63■□□□□ 0.57
SNRPA1-204ENST00000558020 AK7Q96M32 723 aa18.62■□□□□ 0.57
SNRPA1-204ENST00000558020 PLEKHG2Q9H7P9 1386 aa18.61■□□□□ 0.57
SNRPA1-204ENST00000558020 PKD1L3Q7Z443 1732 aa18.6■□□□□ 0.57
SNRPA1-204ENST00000558020 HSP90AB1P08238 724 aaKnown RBP18.6■□□□□ 0.57
SNRPA1-204ENST00000558020 PHKG2P15735 406 aa18.6■□□□□ 0.57
SNRPA1-204ENST00000558020 PLEKHO1Q53GL0 409 aaPredicted RBP18.59■□□□□ 0.57
SNRPA1-204ENST00000558020 LOC102724428A0A0B4J2F2 783 aa18.58■□□□□ 0.56
SNRPA1-204ENST00000558020 SIK1P57059 783 aa18.58■□□□□ 0.56
SNRPA1-204ENST00000558020 AMOTQ4VCS5 1084 aa18.58■□□□□ 0.56
SNRPA1-204ENST00000558020 PELP1Q8IZL8 1130 aaKnown RBP18.58■□□□□ 0.56
SNRPA1-204ENST00000558020 ITGB4P16144 1822 aa18.58■□□□□ 0.56
SNRPA1-204ENST00000558020 C5P01031 1676 aa18.57■□□□□ 0.56
SNRPA1-204ENST00000558020 ERVV-2B6SEH9 535 aa18.57■□□□□ 0.56
SNRPA1-204ENST00000558020 TUBGCP6Q96RT7 1819 aa18.56■□□□□ 0.56
SNRPA1-204ENST00000558020 IGSF1Q8N6C5 1336 aa18.56■□□□□ 0.56
SNRPA1-204ENST00000558020 DCAF5Q96JK2 942 aa18.56■□□□□ 0.56
SNRPA1-204ENST00000558020 ASAP1Q9ULH1 1129 aa18.56■□□□□ 0.56
SNRPA1-204ENST00000558020 COL24A1Q17RW2 1714 aa18.56■□□□□ 0.56
SNRPA1-204ENST00000558020 UTRNP46939 3433 aa18.55■□□□□ 0.56
SNRPA1-204ENST00000558020 ATP6V1AP38606 617 aa18.55■□□□□ 0.56
SNRPA1-204ENST00000558020 MSL1Q68DK7 614 aa18.55■□□□□ 0.56
SNRPA1-204ENST00000558020 GRIN3BO60391 1043 aa18.54■□□□□ 0.56
SNRPA1-204ENST00000558020 SSFA2P28290 1259 aa18.54■□□□□ 0.56
SNRPA1-204ENST00000558020 ZNF784Q8NCA9 323 aaPredicted RBP18.54■□□□□ 0.56
SNRPA1-204ENST00000558020 CD2APQ9Y5K6 639 aa18.54■□□□□ 0.56
SNRPA1-204ENST00000558020 CHD4Q14839 1912 aa18.53■□□□□ 0.56
SNRPA1-204ENST00000558020 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.53■□□□□ 0.56
SNRPA1-204ENST00000558020 C1orf141Q5JVX7 400 aa18.53■□□□□ 0.56
SNRPA1-204ENST00000558020 ATG3Q9NT62 314 aa18.53■□□□□ 0.56
SNRPA1-204ENST00000558020 TOGARAM1Q9Y4F4 1720 aa18.53■□□□□ 0.56
SNRPA1-204ENST00000558020 TAF1LQ8IZX4 1826 aa18.53■□□□□ 0.56
SNRPA1-204ENST00000558020 PHF14O94880 888 aa18.52■□□□□ 0.56
SNRPA1-204ENST00000558020 ZNF530Q6P9A1 599 aaPredicted RBP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms