RNA–Protein interactions for RNA: ENST00000557948.1

TRPM1-204, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-204ENST00000557948 SIRT1Q96EB6 747 aa8.77□□□□□ -1.01
TRPM1-204ENST00000557948 TFCP2L1Q9NZI6 479 aa8.77□□□□□ -1.01
TRPM1-204ENST00000557948 VPS8Q8N3P4 1428 aa8.77□□□□□ -1.01
TRPM1-204ENST00000557948 CPDO75976 1380 aa8.76□□□□□ -1.01
TRPM1-204ENST00000557948 BTAF1O14981 1849 aa8.76□□□□□ -1.01
TRPM1-204ENST00000557948 HS6ST3Q8IZP7 471 aa8.76□□□□□ -1.01
TRPM1-204ENST00000557948 CDCA7Q9BWT1 371 aaPredicted RBP8.76□□□□□ -1.01
TRPM1-204ENST00000557948 BRD4O60885 1362 aaPredicted RBP8.75□□□□□ -1.01
TRPM1-204ENST00000557948 TOM1L2Q6ZVM7 507 aa8.75□□□□□ -1.01
TRPM1-204ENST00000557948 FAM212AQ96EL1 285 aa8.75□□□□□ -1.01
TRPM1-204ENST00000557948 HIRIP3Q9BW71 556 aaPredicted RBP8.75□□□□□ -1.01
TRPM1-204ENST00000557948 LRRC4BQ9NT99 713 aa8.75□□□□□ -1.01
TRPM1-204ENST00000557948 ADGRF5Q8IZF2 1346 aa8.75□□□□□ -1.01
TRPM1-204ENST00000557948 EIF3AQ14152 1382 aaKnown RBP8.74□□□□□ -1.01
TRPM1-204ENST00000557948 ACSBG1Q96GR2 724 aa8.74□□□□□ -1.01
TRPM1-204ENST00000557948 ABHD8Q96I13 439 aa8.74□□□□□ -1.01
TRPM1-204ENST00000557948 PRDM10Q9NQV6 1147 aa8.74□□□□□ -1.01
TRPM1-204ENST00000557948 IGSF1Q8N6C5 1336 aa8.74□□□□□ -1.01
TRPM1-204ENST00000557948 EXOC5O00471 708 aa8.73□□□□□ -1.01
TRPM1-204ENST00000557948 RIOK3O14730 519 aaKnown RBP8.73□□□□□ -1.01
TRPM1-204ENST00000557948 PRAM1Q96QH2 718 aa8.73□□□□□ -1.01
TRPM1-204ENST00000557948 POGKQ9P215 609 aa8.73□□□□□ -1.01
TRPM1-204ENST00000557948 CICQ96RK0 1608 aaPredicted RBP8.72□□□□□ -1.01
TRPM1-204ENST00000557948 ZBTB7CA1YPR0 619 aa8.72□□□□□ -1.01
TRPM1-204ENST00000557948 SLC27A3Q5K4L6 730 aa8.72□□□□□ -1.01
TRPM1-204ENST00000557948 MSL1Q68DK7 614 aa8.72□□□□□ -1.01
TRPM1-204ENST00000557948 SMC1BQ8NDV3 1235 aa8.72□□□□□ -1.01
TRPM1-204ENST00000557948 ROCK1Q13464 1354 aa8.72□□□□□ -1.01
TRPM1-204ENST00000557948 PIK3C2AO00443 1686 aa8.72□□□□□ -1.01
TRPM1-204ENST00000557948 USP6P35125 1406 aa8.71□□□□□ -1.01
TRPM1-204ENST00000557948 ITSN1Q15811 1721 aa8.71□□□□□ -1.01
TRPM1-204ENST00000557948 PDE4DIPQ5VU43 2346 aa8.71□□□□□ -1.01
TRPM1-204ENST00000557948 FOXN1O15353 648 aa8.71□□□□□ -1.02
TRPM1-204ENST00000557948 ZEB1P37275 1124 aaPredicted RBP8.71□□□□□ -1.02
TRPM1-204ENST00000557948 TRPM1Q7Z4N2 1603 aa8.71□□□□□ -1.02
TRPM1-204ENST00000557948 PRR36Q9H6K5 1346 aa8.71□□□□□ -1.02
TRPM1-204ENST00000557948 CCDC85CA6NKD9 419 aa8.7□□□□□ -1.02
TRPM1-204ENST00000557948 RGS19P49795 217 aa8.7□□□□□ -1.02
TRPM1-204ENST00000557948 NKX1-1Q15270 411 aaPredicted RBP8.7□□□□□ -1.02
TRPM1-204ENST00000557948 CHADLQ6NUI6 762 aa8.7□□□□□ -1.02
TRPM1-204ENST00000557948 ABTB2Q8N961 1025 aa8.7□□□□□ -1.02
TRPM1-204ENST00000557948 PYGBP11216 843 aa8.69□□□□□ -1.02
TRPM1-204ENST00000557948 CTCFP49711 727 aaPredicted RBP8.69□□□□□ -1.02
TRPM1-204ENST00000557948 AIDAQ96BJ3 306 aa8.69□□□□□ -1.02
TRPM1-204ENST00000557948 KDM2BQ8NHM5 1336 aa8.69□□□□□ -1.02
TRPM1-204ENST00000557948 PIK3C2GO75747 1445 aa8.69□□□□□ -1.02
TRPM1-204ENST00000557948 TNRC6CQ9HCJ0 1690 aaKnown RBP8.69□□□□□ -1.02
TRPM1-204ENST00000557948 GCP02774 474 aa8.68□□□□□ -1.02
TRPM1-204ENST00000557948 COL23A1Q86Y22 540 aaPredicted RBP8.68□□□□□ -1.02
TRPM1-204ENST00000557948 WDR17Q8IZU2 1322 aa8.68□□□□□ -1.02
TRPM1-204ENST00000557948 C10orf71Q711Q0 1435 aa8.68□□□□□ -1.02
TRPM1-204ENST00000557948 STK25O00506 426 aa8.67□□□□□ -1.02
TRPM1-204ENST00000557948 TNRC18O15417 2968 aaPredicted RBP8.67□□□□□ -1.02
TRPM1-204ENST00000557948 PRKCSHP14314 528 aaPredicted RBP8.67□□□□□ -1.02
TRPM1-204ENST00000557948 KCNQ4P56696 695 aa8.67□□□□□ -1.02
TRPM1-204ENST00000557948 KCPQ6ZWJ8 1503 aa8.67□□□□□ -1.02
TRPM1-204ENST00000557948 NLRP13Q86W25 1043 aa8.67□□□□□ -1.02
TRPM1-204ENST00000557948 PLEKHG2Q9H7P9 1386 aa8.67□□□□□ -1.02
TRPM1-204ENST00000557948 RRAGCQ9HB90 399 aa8.67□□□□□ -1.02
TRPM1-204ENST00000557948 PKD1L3Q7Z443 1732 aa8.66□□□□□ -1.02
TRPM1-204ENST00000557948 MINK1Q8N4C8 1332 aaPredicted RBP8.66□□□□□ -1.02
TRPM1-204ENST00000557948 WASLO00401 505 aaPredicted RBP8.66□□□□□ -1.02
TRPM1-204ENST00000557948 CSB-PGBD3P0DP91 1061 aa8.66□□□□□ -1.02
TRPM1-204ENST00000557948 CHRM1P11229 460 aaPredicted RBP8.66□□□□□ -1.02
TRPM1-204ENST00000557948 RGL3Q3MIN7 710 aa8.66□□□□□ -1.02
TRPM1-204ENST00000557948 ARHGAP27Q6ZUM4 889 aa8.66□□□□□ -1.02
TRPM1-204ENST00000557948 ABCC6O95255 1503 aa8.65□□□□□ -1.02
TRPM1-204ENST00000557948 PXDNLA1KZ92 1463 aa8.65□□□□□ -1.02
TRPM1-204ENST00000557948 LBX1P52954 281 aa8.65□□□□□ -1.02
TRPM1-204ENST00000557948 CARD10Q9BWT7 1032 aa8.65□□□□□ -1.02
TRPM1-204ENST00000557948 MKRN1Q9UHC7 482 aaKnown RBP8.65□□□□□ -1.02
TRPM1-204ENST00000557948 RGPD5Q99666 1765 aa8.64□□□□□ -1.03
TRPM1-204ENST00000557948 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.64□□□□□ -1.03
TRPM1-204ENST00000557948 C9orf131Q5VYM1 1079 aa8.64□□□□□ -1.03
TRPM1-204ENST00000557948 ZFP91Q96JP5 570 aaPredicted RBP8.64□□□□□ -1.03
TRPM1-204ENST00000557948 COL18A1P39060 1754 aa8.63□□□□□ -1.03
TRPM1-204ENST00000557948 LY75O60449 1722 aa8.63□□□□□ -1.03
TRPM1-204ENST00000557948 GTPBP6O43824 516 aaPredicted RBP8.63□□□□□ -1.03
TRPM1-204ENST00000557948 NUDT16Q96DE0 195 aaKnown RBP8.63□□□□□ -1.03
TRPM1-204ENST00000557948 C14orf93Q9H972 538 aaKnown RBP8.63□□□□□ -1.03
TRPM1-204ENST00000557948 TAOK2Q9UL54 1235 aa8.63□□□□□ -1.03
TRPM1-204ENST00000557948 BCS1LQ9Y276 419 aa8.63□□□□□ -1.03
TRPM1-204ENST00000557948 CCDC7Q96M83 1385 aa8.62□□□□□ -1.03
TRPM1-204ENST00000557948 ACEP12821 1306 aa8.62□□□□□ -1.03
TRPM1-204ENST00000557948 TSPYL2Q9H2G4 693 aaPredicted RBP8.62□□□□□ -1.03
TRPM1-204ENST00000557948 CCNL1Q9UK58 526 aaPredicted RBP8.62□□□□□ -1.03
TRPM1-204ENST00000557948 AXIN2Q9Y2T1 843 aa8.62□□□□□ -1.03
TRPM1-204ENST00000557948 PPIP5K1Q6PFW1 1433 aa8.62□□□□□ -1.03
TRPM1-204ENST00000557948 POLR3AO14802 1390 aaPredicted RBP8.61□□□□□ -1.03
TRPM1-204ENST00000557948 N4BP2Q86UW6 1770 aaPredicted RBP8.61□□□□□ -1.03
TRPM1-204ENST00000557948 ITGAEP38570 1179 aa8.61□□□□□ -1.03
TRPM1-204ENST00000557948 CFAP70Q5T0N1 1121 aa8.61□□□□□ -1.03
TRPM1-204ENST00000557948 FLAD1Q8NFF5 587 aa8.61□□□□□ -1.03
TRPM1-204ENST00000557948 STK24Q9Y6E0 443 aa8.61□□□□□ -1.03
TRPM1-204ENST00000557948 SYTL4Q96C24 671 aaPredicted RBP8.6□□□□□ -1.03
TRPM1-204ENST00000557948 PCGF6Q9BYE7 350 aa8.6□□□□□ -1.03
TRPM1-204ENST00000557948 FARP1Q9Y4F1 1045 aaPredicted RBP8.6□□□□□ -1.03
TRPM1-204ENST00000557948 RNF181Q9P0P0 153 aa8.59□□□□□ -1.03
TRPM1-204ENST00000557948 TRAK1Q9UPV9 953 aa8.59□□□□□ -1.03
TRPM1-204ENST00000557948 SPATA31E1Q6ZUB1 1445 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms