RNA–Protein interactions for RNA: ENST00000557726.1

RDH11-211, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 621 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-211ENST00000557726 USHBP1Q8N6Y0 703 aa17.8■□□□□ 0.44
RDH11-211ENST00000557726 FHDC1Q9C0D6 1143 aaPredicted RBP17.8■□□□□ 0.44
RDH11-211ENST00000557726 MEGF6O75095 1541 aa17.79■□□□□ 0.44
RDH11-211ENST00000557726 NBPF6Q5VWK0 638 aa17.79■□□□□ 0.44
RDH11-211ENST00000557726 RAPGEF4Q8WZA2 1011 aa17.79■□□□□ 0.44
RDH11-211ENST00000557726 NBPF4Q96M43 638 aa17.79■□□□□ 0.44
RDH11-211ENST00000557726 SYT17Q9BSW7 474 aa17.79■□□□□ 0.44
RDH11-211ENST00000557726 ARXQ96QS3 562 aa17.78■□□□□ 0.44
RDH11-211ENST00000557726 SHANK3Q9BYB0 1731 aa17.78■□□□□ 0.44
RDH11-211ENST00000557726 TATP17735 454 aaPredicted RBP17.77■□□□□ 0.44
RDH11-211ENST00000557726 KCNQ4P56696 695 aa17.77■□□□□ 0.44
RDH11-211ENST00000557726 SGIP1Q9BQI5 828 aa17.77■□□□□ 0.44
RDH11-211ENST00000557726 TFCP2L1Q9NZI6 479 aa17.77■□□□□ 0.44
RDH11-211ENST00000557726 CGNL1Q0VF96 1302 aa17.76■□□□□ 0.43
RDH11-211ENST00000557726 HSP90AB2PQ58FF8 381 aa17.76■□□□□ 0.43
RDH11-211ENST00000557726 AKT1S1Q96B36 256 aa17.76■□□□□ 0.43
RDH11-211ENST00000557726 INSRP06213 1382 aa17.75■□□□□ 0.43
RDH11-211ENST00000557726 FLT4P35916 1363 aa17.75■□□□□ 0.43
RDH11-211ENST00000557726 NSD3Q9BZ95 1437 aa17.74■□□□□ 0.43
RDH11-211ENST00000557726 KLHL34Q8N239 644 aa17.74■□□□□ 0.43
RDH11-211ENST00000557726 SLC16A10Q8TF71 515 aa17.74■□□□□ 0.43
RDH11-211ENST00000557726 CCNL1Q9UK58 526 aaPredicted RBP17.74■□□□□ 0.43
RDH11-211ENST00000557726 LY75O60449 1722 aa17.74■□□□□ 0.43
RDH11-211ENST00000557726 QSER1Q2KHR3 1735 aa17.74■□□□□ 0.43
RDH11-211ENST00000557726 POLD1P28340 1107 aa17.73■□□□□ 0.43
RDH11-211ENST00000557726 CARD14Q9BXL6 1004 aa17.73■□□□□ 0.43
RDH11-211ENST00000557726 PCGF6Q9BYE7 350 aa17.73■□□□□ 0.43
RDH11-211ENST00000557726 TIMELESSQ9UNS1 1208 aa17.73■□□□□ 0.43
RDH11-211ENST00000557726 NSD2O96028 1365 aa17.73■□□□□ 0.43
RDH11-211ENST00000557726 PNPLA7Q6ZV29 1317 aa17.72■□□□□ 0.43
RDH11-211ENST00000557726 KIF24Q5T7B8 1368 aa17.72■□□□□ 0.43
RDH11-211ENST00000557726 PPM1GO15355 546 aaPredicted RBP17.72■□□□□ 0.43
RDH11-211ENST00000557726 POLR3GLQ9BT43 218 aa17.72■□□□□ 0.43
RDH11-211ENST00000557726 TUBGCP6Q96RT7 1819 aa17.72■□□□□ 0.43
RDH11-211ENST00000557726 PCDH11XQ9BZA7 1347 aa17.72■□□□□ 0.43
RDH11-211ENST00000557726 PCDH11YQ9BZA8 1340 aa17.72■□□□□ 0.43
RDH11-211ENST00000557726 MSH5O43196 834 aa17.71■□□□□ 0.43
RDH11-211ENST00000557726 EMILIN1Q9Y6C2 1016 aa17.71■□□□□ 0.43
RDH11-211ENST00000557726 CHD4Q14839 1912 aa17.7■□□□□ 0.42
RDH11-211ENST00000557726 MAP3K5Q99683 1374 aa17.68■□□□□ 0.42
RDH11-211ENST00000557726 MAP2P11137 1827 aaKnown RBP17.68■□□□□ 0.42
RDH11-211ENST00000557726 GPR162Q16538 588 aa17.68■□□□□ 0.42
RDH11-211ENST00000557726 MPRIPQ6WCQ1 1025 aa17.68■□□□□ 0.42
RDH11-211ENST00000557726 CLSPNQ9HAW4 1339 aa17.67■□□□□ 0.42
RDH11-211ENST00000557726 CYP27B1O15528 508 aa17.66■□□□□ 0.42
RDH11-211ENST00000557726 PELP1Q8IZL8 1130 aaKnown RBP17.66■□□□□ 0.42
RDH11-211ENST00000557726 HMGB2P26583 209 aaKnown RBP17.65■□□□□ 0.42
RDH11-211ENST00000557726 ITGB4P16144 1822 aa17.65■□□□□ 0.42
RDH11-211ENST00000557726 PALLDQ8WX93 1383 aa17.65■□□□□ 0.42
RDH11-211ENST00000557726 COL24A1Q17RW2 1714 aa17.64■□□□□ 0.41
RDH11-211ENST00000557726 COL23A1Q86Y22 540 aaPredicted RBP17.64■□□□□ 0.41
RDH11-211ENST00000557726 SPG7Q9UQ90 795 aa17.64■□□□□ 0.41
RDH11-211ENST00000557726 C5P01031 1676 aa17.64■□□□□ 0.41
RDH11-211ENST00000557726 TNNT2P45379 298 aaPredicted RBP17.63■□□□□ 0.41
RDH11-211ENST00000557726 ZNF784Q8NCA9 323 aaPredicted RBP17.63■□□□□ 0.41
RDH11-211ENST00000557726 SMARCC1Q92922 1105 aaPredicted RBP17.63■□□□□ 0.41
RDH11-211ENST00000557726 WASHC2AQ641Q2 1341 aa17.63■□□□□ 0.41
RDH11-211ENST00000557726 PKD1L3Q7Z443 1732 aa17.63■□□□□ 0.41
RDH11-211ENST00000557726 ANKRD26Q9UPS8 1709 aa17.62■□□□□ 0.41
RDH11-211ENST00000557726 MSL1Q68DK7 614 aa17.62■□□□□ 0.41
RDH11-211ENST00000557726 EYA1Q99502 592 aa17.62■□□□□ 0.41
RDH11-211ENST00000557726 TAF1LQ8IZX4 1826 aa17.62■□□□□ 0.41
RDH11-211ENST00000557726 TOGARAM1Q9Y4F4 1720 aa17.61■□□□□ 0.41
RDH11-211ENST00000557726 FLAD1Q8NFF5 587 aa17.61■□□□□ 0.41
RDH11-211ENST00000557726 POLKQ9UBT6 870 aa17.61■□□□□ 0.41
RDH11-211ENST00000557726 EIF4G2P78344 907 aaKnown RBP eCLIP17.6■□□□□ 0.41
RDH11-211ENST00000557726 PIGBQ92521 554 aa17.6■□□□□ 0.41
RDH11-211ENST00000557726 NCAPD2Q15021 1401 aa17.59■□□□□ 0.41
RDH11-211ENST00000557726 NLGN2Q8NFZ4 835 aa17.59■□□□□ 0.41
RDH11-211ENST00000557726 AK7Q96M32 723 aa17.59■□□□□ 0.41
RDH11-211ENST00000557726 NKX1-1Q15270 411 aaPredicted RBP17.58■□□□□ 0.4
RDH11-211ENST00000557726 HSPA5P11021 654 aaKnown RBP17.57■□□□□ 0.4
RDH11-211ENST00000557726 IFNL2Q8IZJ0 200 aa17.57■□□□□ 0.4
RDH11-211ENST00000557726 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.57■□□□□ 0.4
RDH11-211ENST00000557726 TMOD3Q9NYL9 352 aa17.57■□□□□ 0.4
RDH11-211ENST00000557726 C4BP0C0L5 1744 aa17.57■□□□□ 0.4
RDH11-211ENST00000557726 EIF4A2Q14240 407 aaKnown RBP17.56■□□□□ 0.4
RDH11-211ENST00000557726 PHF14O94880 888 aa17.55■□□□□ 0.4
RDH11-211ENST00000557726 CCER1Q8TC90 406 aaPredicted RBP17.55■□□□□ 0.4
RDH11-211ENST00000557726 PANK3Q9H999 370 aa17.55■□□□□ 0.4
RDH11-211ENST00000557726 LOC102724428A0A0B4J2F2 783 aa17.54■□□□□ 0.4
RDH11-211ENST00000557726 PHKG2P15735 406 aa17.54■□□□□ 0.4
RDH11-211ENST00000557726 SIK1P57059 783 aa17.54■□□□□ 0.4
RDH11-211ENST00000557726 UBR3Q6ZT12 1888 aa17.53■□□□□ 0.4
RDH11-211ENST00000557726 ASAP1Q9ULH1 1129 aa17.53■□□□□ 0.4
RDH11-211ENST00000557726 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.52■□□□□ 0.4
RDH11-211ENST00000557726 GRIN3BO60391 1043 aa17.52■□□□□ 0.4
RDH11-211ENST00000557726 ATP6V1AP38606 617 aa17.52■□□□□ 0.4
RDH11-211ENST00000557726 YBX3P16989 372 aaKnown RBP eCLIP17.51■□□□□ 0.398e-7■■□□□ 12.2
RDH11-211ENST00000557726 SMIM5Q71RC9 77 aa17.51■□□□□ 0.39
RDH11-211ENST00000557726 MORC1Q86VD1 984 aa17.51■□□□□ 0.39
RDH11-211ENST00000557726 LINC00116Q8NCU8 138 aa17.51■□□□□ 0.39
RDH11-211ENST00000557726 CD2APQ9Y5K6 639 aa17.51■□□□□ 0.39
RDH11-211ENST00000557726 SSFA2P28290 1259 aa17.5■□□□□ 0.39
RDH11-211ENST00000557726 PLEKHO1Q53GL0 409 aaPredicted RBP17.5■□□□□ 0.39
RDH11-211ENST00000557726 IGSF1Q8N6C5 1336 aa17.49■□□□□ 0.39
RDH11-211ENST00000557726 GNPATO15228 680 aa17.49■□□□□ 0.39
RDH11-211ENST00000557726 AMIGO3Q86WK7 504 aa17.49■□□□□ 0.39
RDH11-211ENST00000557726 HSP90AB1P08238 724 aaKnown RBP17.48■□□□□ 0.39
RDH11-211ENST00000557726 ITPK1Q13572 414 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms