RNA–Protein interactions for RNA: ENST00000557725.5

LGMN-219, Transcript of legumain, humanhuman

TSL 2

Gene LGMN, Length 741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-219ENST00000557725 COL24A1Q17RW2 1714 aa16.41■□□□□ 0.22
LGMN-219ENST00000557725 TONSLQ96HA7 1378 aa16.4■□□□□ 0.22
LGMN-219ENST00000557725 ST20-MTHFSA0A0A6YYL1 179 aa16.4■□□□□ 0.22
LGMN-219ENST00000557725 MAP3K5Q99683 1374 aa16.39■□□□□ 0.21
LGMN-219ENST00000557725 AMPHP49418 695 aa16.39■□□□□ 0.21
LGMN-219ENST00000557725 RRS1Q15050 365 aaKnown RBP16.39■□□□□ 0.21
LGMN-219ENST00000557725 PELP1Q8IZL8 1130 aaKnown RBP16.39■□□□□ 0.21
LGMN-219ENST00000557725 NLGN2Q8NFZ4 835 aa16.39■□□□□ 0.21
LGMN-219ENST00000557725 COG3Q96JB2 828 aa16.39■□□□□ 0.21
LGMN-219ENST00000557725 ANKRD36BQ8N2N9 1353 aa16.38■□□□□ 0.21
LGMN-219ENST00000557725 GPR162Q16538 588 aa16.38■□□□□ 0.21
LGMN-219ENST00000557725 SLC27A3Q5K4L6 730 aa16.38■□□□□ 0.21
LGMN-219ENST00000557725 TFCP2L1Q9NZI6 479 aa16.38■□□□□ 0.21
LGMN-219ENST00000557725 NBPF6Q5VWK0 638 aa16.37■□□□□ 0.21
LGMN-219ENST00000557725 ZCRB1Q8TBF4 217 aaKnown RBP16.37■□□□□ 0.21
LGMN-219ENST00000557725 NBPF4Q96M43 638 aa16.37■□□□□ 0.21
LGMN-219ENST00000557725 PUS7Q96PZ0 661 aaKnown RBP16.36■□□□□ 0.21
LGMN-219ENST00000557725 GGNBP2Q9H3C7 697 aa16.36■□□□□ 0.21
LGMN-219ENST00000557725 POLD1P28340 1107 aa16.35■□□□□ 0.21
LGMN-219ENST00000557725 CCNL1Q9UK58 526 aaPredicted RBP16.35■□□□□ 0.21
LGMN-219ENST00000557725 MSL1Q68DK7 614 aa16.34■□□□□ 0.21
LGMN-219ENST00000557725 SLC16A10Q8TF71 515 aa16.34■□□□□ 0.21
LGMN-219ENST00000557725 SENP3-EIF4A1A0A087X0R7 540 aa16.33■□□□□ 0.2
LGMN-219ENST00000557725 MSH5O43196 834 aa16.33■□□□□ 0.2
LGMN-219ENST00000557725 COL23A1Q86Y22 540 aaPredicted RBP16.33■□□□□ 0.2
LGMN-219ENST00000557725 FYB1O15117 783 aa16.32■□□□□ 0.2
LGMN-219ENST00000557725 C5P01031 1676 aa16.32■□□□□ 0.2
LGMN-219ENST00000557725 C1QTNF8P60827 252 aa16.32■□□□□ 0.2
LGMN-219ENST00000557725 KIF20BQ96Q89 1820 aa16.32■□□□□ 0.2
LGMN-219ENST00000557725 TOGARAM1Q9Y4F4 1720 aa16.32■□□□□ 0.2
LGMN-219ENST00000557725 RTL1A6NKG5 1358 aa16.31■□□□□ 0.2
LGMN-219ENST00000557725 YBX3P16989 372 aaKnown RBP eCLIP16.31■□□□□ 0.2
LGMN-219ENST00000557725 HSP90AB2PQ58FF8 381 aa16.31■□□□□ 0.2
LGMN-219ENST00000557725 USP47Q96K76 1375 aa16.3■□□□□ 0.2
LGMN-219ENST00000557725 SMIM5Q71RC9 77 aa16.3■□□□□ 0.2
LGMN-219ENST00000557725 TAF1LQ8IZX4 1826 aa16.3■□□□□ 0.2
LGMN-219ENST00000557725 ITGB4P16144 1822 aa16.29■□□□□ 0.2
LGMN-219ENST00000557725 AMIGO3Q86WK7 504 aa16.28■□□□□ 0.2
LGMN-219ENST00000557725 RAPGEF4Q8WZA2 1011 aa16.28■□□□□ 0.2
LGMN-219ENST00000557725 CEP350Q5VT06 3117 aa16.28■□□□□ 0.2
LGMN-219ENST00000557725 TATP17735 454 aaPredicted RBP16.27■□□□□ 0.2
LGMN-219ENST00000557725 MPRIPQ6WCQ1 1025 aa16.27■□□□□ 0.2
LGMN-219ENST00000557725 SMG6Q86US8 1419 aaKnown RBP16.27■□□□□ 0.19
LGMN-219ENST00000557725 CYP27B1O15528 508 aa16.26■□□□□ 0.19
LGMN-219ENST00000557725 PALLDQ8WX93 1383 aa16.26■□□□□ 0.19
LGMN-219ENST00000557725 GIGYF1O75420 1035 aaPredicted RBP16.25■□□□□ 0.19
LGMN-219ENST00000557725 TMF1P82094 1093 aa16.25■□□□□ 0.19
LGMN-219ENST00000557725 WWC3Q9ULE0 1092 aa16.25■□□□□ 0.19
LGMN-219ENST00000557725 EMILIN1Q9Y6C2 1016 aa16.25■□□□□ 0.19
LGMN-219ENST00000557725 INSRP06213 1382 aa16.25■□□□□ 0.19
LGMN-219ENST00000557725 CARD14Q9BXL6 1004 aa16.24■□□□□ 0.19
LGMN-219ENST00000557725 C4BP0C0L5 1744 aa16.24■□□□□ 0.19
LGMN-219ENST00000557725 PKD1L3Q7Z443 1732 aa16.24■□□□□ 0.19
LGMN-219ENST00000557725 FLT4P35916 1363 aa16.24■□□□□ 0.19
LGMN-219ENST00000557725 CGNL1Q0VF96 1302 aa16.23■□□□□ 0.19
LGMN-219ENST00000557725 PCDH11XQ9BZA7 1347 aa16.23■□□□□ 0.19
LGMN-219ENST00000557725 PCDH11YQ9BZA8 1340 aa16.23■□□□□ 0.19
LGMN-219ENST00000557725 UBR3Q6ZT12 1888 aa16.22■□□□□ 0.19
LGMN-219ENST00000557725 NSD3Q9BZ95 1437 aa16.22■□□□□ 0.19
LGMN-219ENST00000557725 PHF14O94880 888 aa16.22■□□□□ 0.19
LGMN-219ENST00000557725 MAP2P11137 1827 aaKnown RBP16.2■□□□□ 0.18
LGMN-219ENST00000557725 PPM1GO15355 546 aaPredicted RBP16.2■□□□□ 0.18
LGMN-219ENST00000557725 PIGBQ92521 554 aa16.2■□□□□ 0.18
LGMN-219ENST00000557725 ATP10DQ9P241 1426 aa16.19■□□□□ 0.18
LGMN-219ENST00000557725 ANKRD26Q9UPS8 1709 aa16.19■□□□□ 0.18
LGMN-219ENST00000557725 GRIN3BO60391 1043 aa16.18■□□□□ 0.18
LGMN-219ENST00000557725 LINC00116Q8NCU8 138 aa16.18■□□□□ 0.18
LGMN-219ENST00000557725 AK7Q96M32 723 aa16.18■□□□□ 0.18
LGMN-219ENST00000557725 SLC24A1O60721 1099 aa16.17■□□□□ 0.18
LGMN-219ENST00000557725 ZNF526Q8TF50 670 aaPredicted RBP16.17■□□□□ 0.18
LGMN-219ENST00000557725 NCAPD2Q15021 1401 aa16.17■□□□□ 0.18
LGMN-219ENST00000557725 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.16■□□□□ 0.18
LGMN-219ENST00000557725 CD2APQ9Y5K6 639 aa16.16■□□□□ 0.18
LGMN-219ENST00000557725 KIF24Q5T7B8 1368 aa16.15■□□□□ 0.18
LGMN-219ENST00000557725 ITPK1Q13572 414 aa16.15■□□□□ 0.18
LGMN-219ENST00000557725 FLAD1Q8NFF5 587 aa16.15■□□□□ 0.18
LGMN-219ENST00000557725 EYA1Q99502 592 aa16.15■□□□□ 0.18
LGMN-219ENST00000557725 ASAP1Q9ULH1 1129 aa16.15■□□□□ 0.18
LGMN-219ENST00000557725 IGSF1Q8N6C5 1336 aa16.15■□□□□ 0.18
LGMN-219ENST00000557725 NKX1-1Q15270 411 aaPredicted RBP16.14■□□□□ 0.17
LGMN-219ENST00000557725 SMARCC1Q92922 1105 aaPredicted RBP16.14■□□□□ 0.17
LGMN-219ENST00000557725 LOC102724428A0A0B4J2F2 783 aa16.13■□□□□ 0.17
LGMN-219ENST00000557725 SIK1P57059 783 aa16.13■□□□□ 0.17
LGMN-219ENST00000557725 ADCY9O60503 1353 aa16.13■□□□□ 0.17
LGMN-219ENST00000557725 TNNT2P45379 298 aaPredicted RBP16.12■□□□□ 0.17
LGMN-219ENST00000557725 POLR3GLQ9BT43 218 aa16.12■□□□□ 0.17
LGMN-219ENST00000557725 SPG7Q9UQ90 795 aa16.12■□□□□ 0.17
LGMN-219ENST00000557725 WASHC2AQ641Q2 1341 aa16.12■□□□□ 0.17
LGMN-219ENST00000557725 GNPATO15228 680 aa16.11■□□□□ 0.17
LGMN-219ENST00000557725 PHKG2P15735 406 aa16.11■□□□□ 0.17
LGMN-219ENST00000557725 CDCA8Q53HL2 280 aa16.11■□□□□ 0.17
LGMN-219ENST00000557725 TMOD3Q9NYL9 352 aa16.11■□□□□ 0.17
LGMN-219ENST00000557725 POLKQ9UBT6 870 aa16.11■□□□□ 0.17
LGMN-219ENST00000557725 N4BP2Q86UW6 1770 aaPredicted RBP16.1■□□□□ 0.17
LGMN-219ENST00000557725 SSFA2P28290 1259 aa16.1■□□□□ 0.17
LGMN-219ENST00000557725 ATP6V1AP38606 617 aa16.1■□□□□ 0.17
LGMN-219ENST00000557725 GPBP1L1Q9HC44 474 aaPredicted RBP16.1■□□□□ 0.17
LGMN-219ENST00000557725 ATG3Q9NT62 314 aa16.1■□□□□ 0.17
LGMN-219ENST00000557725 KIAA1551Q9HCM1 1747 aa16.1■□□□□ 0.17
LGMN-219ENST00000557725 EIF4A2Q14240 407 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms