RNA–Protein interactions for RNA: ENST00000557626.5

TMEM260-215, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 1,262 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-215ENST00000557626 TNRC6CQ9HCJ0 1690 aaKnown RBP19.59■□□□□ 0.73
TMEM260-215ENST00000557626 KDM2BQ8NHM5 1336 aa19.58■□□□□ 0.73
TMEM260-215ENST00000557626 PRDM10Q9NQV6 1147 aa19.58■□□□□ 0.72
TMEM260-215ENST00000557626 PKD1L3Q7Z443 1732 aa19.56■□□□□ 0.72
TMEM260-215ENST00000557626 ARHGAP27Q6ZUM4 889 aa19.56■□□□□ 0.72
TMEM260-215ENST00000557626 FLAD1Q8NFF5 587 aa19.56■□□□□ 0.72
TMEM260-215ENST00000557626 SOX12O15370 315 aa19.55■□□□□ 0.72
TMEM260-215ENST00000557626 RRAGCQ9HB90 399 aa19.55■□□□□ 0.72
TMEM260-215ENST00000557626 C5P01031 1676 aa19.55■□□□□ 0.72
TMEM260-215ENST00000557626 USP54Q70EL1 1684 aa19.55■□□□□ 0.72
TMEM260-215ENST00000557626 DOT1LQ8TEK3 1739 aa19.54■□□□□ 0.72
TMEM260-215ENST00000557626 FOXN1O15353 648 aa19.54■□□□□ 0.72
TMEM260-215ENST00000557626 NLRP2Q9NX02 1062 aa19.54■□□□□ 0.72
TMEM260-215ENST00000557626 BCS1LQ9Y276 419 aa19.54■□□□□ 0.72
TMEM260-215ENST00000557626 C9orf131Q5VYM1 1079 aa19.53■□□□□ 0.72
TMEM260-215ENST00000557626 KCNH5Q8NCM2 988 aa19.53■□□□□ 0.72
TMEM260-215ENST00000557626 PXDNLA1KZ92 1463 aa19.53■□□□□ 0.72
TMEM260-215ENST00000557626 PRIM1P49642 420 aaKnown RBP19.52■□□□□ 0.72
TMEM260-215ENST00000557626 ABHD8Q96I13 439 aa19.52■□□□□ 0.72
TMEM260-215ENST00000557626 DDX54Q8TDD1 881 aaKnown RBP19.51■□□□□ 0.71
TMEM260-215ENST00000557626 ANKRD36BQ8N2N9 1353 aa19.51■□□□□ 0.71
TMEM260-215ENST00000557626 N4BP2Q86UW6 1770 aaPredicted RBP19.51■□□□□ 0.71
TMEM260-215ENST00000557626 QRICH2Q9H0J4 1663 aa19.5■□□□□ 0.71
TMEM260-215ENST00000557626 NSD2O96028 1365 aa19.5■□□□□ 0.71
TMEM260-215ENST00000557626 CTCFP49711 727 aaPredicted RBP19.48■□□□□ 0.71
TMEM260-215ENST00000557626 ERBB3P21860 1342 aa19.48■□□□□ 0.71
TMEM260-215ENST00000557626 KIAA1551Q9HCM1 1747 aa19.48■□□□□ 0.71
TMEM260-215ENST00000557626 USP47Q96K76 1375 aa19.47■□□□□ 0.71
TMEM260-215ENST00000557626 NFAT5O94916 1531 aa19.47■□□□□ 0.71
TMEM260-215ENST00000557626 AIDAQ96BJ3 306 aa19.47■□□□□ 0.71
TMEM260-215ENST00000557626 TAF1LQ8IZX4 1826 aa19.46■□□□□ 0.71
TMEM260-215ENST00000557626 TNRC18O15417 2968 aaPredicted RBP19.46■□□□□ 0.71
TMEM260-215ENST00000557626 SRPK2P78362 688 aaKnown RBP19.46■□□□□ 0.71
TMEM260-215ENST00000557626 KIF13BQ9NQT8 1826 aa19.46■□□□□ 0.71
TMEM260-215ENST00000557626 RGS19P49795 217 aa19.45■□□□□ 0.7
TMEM260-215ENST00000557626 MPHOSPH9Q99550 1183 aa19.45■□□□□ 0.7
TMEM260-215ENST00000557626 HMGB2P26583 209 aaKnown RBP19.44■□□□□ 0.7
TMEM260-215ENST00000557626 MKRN1Q9UHC7 482 aaKnown RBP19.44■□□□□ 0.7
TMEM260-215ENST00000557626 FCHSD2O94868 740 aa19.43■□□□□ 0.7
TMEM260-215ENST00000557626 RNF181Q9P0P0 153 aa19.43■□□□□ 0.7
TMEM260-215ENST00000557626 PDE4DIPQ5VU43 2346 aa19.43■□□□□ 0.7
TMEM260-215ENST00000557626 TOGARAM1Q9Y4F4 1720 aa19.42■□□□□ 0.7
TMEM260-215ENST00000557626 PHF14O94880 888 aa19.42■□□□□ 0.7
TMEM260-215ENST00000557626 TGFB2P61812 414 aa19.42■□□□□ 0.7
TMEM260-215ENST00000557626 UBR3Q6ZT12 1888 aa19.41■□□□□ 0.7
TMEM260-215ENST00000557626 A0A0G2JLW4 131 aa19.41■□□□□ 0.7
TMEM260-215ENST00000557626 CCDC85CA6NKD9 419 aa19.41■□□□□ 0.7
TMEM260-215ENST00000557626 AK7Q96M32 723 aa19.41■□□□□ 0.7
TMEM260-215ENST00000557626 C4BP0C0L5 1744 aa19.41■□□□□ 0.7
TMEM260-215ENST00000557626 ARFGEF1Q9Y6D6 1849 aa19.41■□□□□ 0.7
TMEM260-215ENST00000557626 BRCA1P38398 1863 aaKnown RBP19.41■□□□□ 0.7
TMEM260-215ENST00000557626 LBX1P52954 281 aa19.4■□□□□ 0.7
TMEM260-215ENST00000557626 CABP2Q9NPB3 220 aa19.4■□□□□ 0.7
TMEM260-215ENST00000557626 CABP1Q9NZU7 370 aa19.4■□□□□ 0.7
TMEM260-215ENST00000557626 KDM2AQ9Y2K7 1162 aa19.4■□□□□ 0.7
TMEM260-215ENST00000557626 SMIM5Q71RC9 77 aa19.39■□□□□ 0.69
TMEM260-215ENST00000557626 NSD3Q9BZ95 1437 aa19.39■□□□□ 0.69
TMEM260-215ENST00000557626 AMIGO3Q86WK7 504 aa19.38■□□□□ 0.69
TMEM260-215ENST00000557626 CREBZFQ9NS37 354 aa19.38■□□□□ 0.69
TMEM260-215ENST00000557626 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.37■□□□□ 0.69
TMEM260-215ENST00000557626 ANKRD24Q8TF21 1146 aa19.37■□□□□ 0.69
TMEM260-215ENST00000557626 VEGFAP15692 232 aaPredicted RBP19.36■□□□□ 0.69
TMEM260-215ENST00000557626 LTN1O94822 1766 aa19.36■□□□□ 0.69
TMEM260-215ENST00000557626 SBF1O95248 1867 aa19.35■□□□□ 0.69
TMEM260-215ENST00000557626 TTC21BQ7Z4L5 1316 aa19.35■□□□□ 0.69
TMEM260-215ENST00000557626 MMP10P09238 476 aa19.35■□□□□ 0.69
TMEM260-215ENST00000557626 DPEP1P16444 411 aa19.34■□□□□ 0.69
TMEM260-215ENST00000557626 CNTNAP1P78357 1384 aa19.33■□□□□ 0.69
TMEM260-215ENST00000557626 DCAF11Q8TEB1 546 aa19.33■□□□□ 0.68
TMEM260-215ENST00000557626 PALLDQ8WX93 1383 aa19.32■□□□□ 0.68
TMEM260-215ENST00000557626 SSFA2P28290 1259 aa19.32■□□□□ 0.68
TMEM260-215ENST00000557626 TTC21AQ8NDW8 1320 aa19.31■□□□□ 0.68
TMEM260-215ENST00000557626 PPARGC1BQ86YN6 1023 aaKnown RBP19.31■□□□□ 0.68
TMEM260-215ENST00000557626 ZC3H4Q9UPT8 1303 aaKnown RBP19.3■□□□□ 0.68
TMEM260-215ENST00000557626 FAM208AQ9UK61 1670 aaKnown RBP19.3■□□□□ 0.68
TMEM260-215ENST00000557626 WBP1LQ9NX94 342 aa19.29■□□□□ 0.68
TMEM260-215ENST00000557626 HSPA8P11142 646 aaKnown RBP19.28■□□□□ 0.68
TMEM260-215ENST00000557626 ZCRB1Q8TBF4 217 aaKnown RBP19.28■□□□□ 0.68
TMEM260-215ENST00000557626 DCAF5Q96JK2 942 aa19.28■□□□□ 0.68
TMEM260-215ENST00000557626 CFAP44Q96MT7 982 aa19.28■□□□□ 0.68
TMEM260-215ENST00000557626 GLTPD2A6NH11 291 aa19.27■□□□□ 0.68
TMEM260-215ENST00000557626 VIRMAQ69YN4 1812 aaKnown RBP19.27■□□□□ 0.68
TMEM260-215ENST00000557626 ZNF692Q9BU19 519 aaPredicted RBP19.26■□□□□ 0.67
TMEM260-215ENST00000557626 CCDC87Q9NVE4 849 aa19.26■□□□□ 0.67
TMEM260-215ENST00000557626 PIM2Q9P1W9 311 aa19.26■□□□□ 0.67
TMEM260-215ENST00000557626 VEGFBP49765 207 aa19.25■□□□□ 0.67
TMEM260-215ENST00000557626 DALRD3Q5D0E6 543 aaKnown RBP19.25■□□□□ 0.67
TMEM260-215ENST00000557626 STAC3Q96MF2 364 aa19.25■□□□□ 0.67
TMEM260-215ENST00000557626 KCNA3P22001 575 aa19.24■□□□□ 0.67
TMEM260-215ENST00000557626 CENPJQ9HC77 1338 aaPredicted RBP19.23■□□□□ 0.67
TMEM260-215ENST00000557626 C4AP0C0L4 1744 aa19.22■□□□□ 0.67
TMEM260-215ENST00000557626 TIAM2Q8IVF5 1701 aa19.22■□□□□ 0.67
TMEM260-215ENST00000557626 GNPATO15228 680 aa19.21■□□□□ 0.67
TMEM260-215ENST00000557626 LTV1Q96GA3 475 aaPredicted RBP19.21■□□□□ 0.67
TMEM260-215ENST00000557626 MEGF6O75095 1541 aa19.2■□□□□ 0.66
TMEM260-215ENST00000557626 RASSF7Q02833 373 aa19.2■□□□□ 0.66
TMEM260-215ENST00000557626 CHADLQ6NUI6 762 aa19.2■□□□□ 0.66
TMEM260-215ENST00000557626 SMARCC1Q92922 1105 aaPredicted RBP19.2■□□□□ 0.66
TMEM260-215ENST00000557626 KDM6AO15550 1401 aaPredicted RBP19.19■□□□□ 0.66
TMEM260-215ENST00000557626 MPRIPQ6WCQ1 1025 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms