RNA–Protein interactions for RNA: ENST00000557624.1

RIPK3-206, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,629 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-206ENST00000557624 NEFMP07197 916 aa18.75■□□□□ 0.59
RIPK3-206ENST00000557624 BARGINQ6ZT62 677 aa18.74■□□□□ 0.59
RIPK3-206ENST00000557624 PHACTR3Q96KR7 559 aa18.74■□□□□ 0.59
RIPK3-206ENST00000557624 PLEKHF1Q96S99 279 aa18.74■□□□□ 0.59
RIPK3-206ENST00000557624 DISP2A7MBM2 1401 aa18.74■□□□□ 0.59
RIPK3-206ENST00000557624 OVOS2A0A0G2JMS6 1433 aa18.74■□□□□ 0.59
RIPK3-206ENST00000557624 SENP3-EIF4A1A0A087X0R7 540 aa18.74■□□□□ 0.59
RIPK3-206ENST00000557624 RUNDC1Q96C34 613 aa18.74■□□□□ 0.59
RIPK3-206ENST00000557624 CDCA7Q9BWT1 371 aaPredicted RBP18.73■□□□□ 0.59
RIPK3-206ENST00000557624 RBM6P78332 1123 aaKnown RBP18.72■□□□□ 0.59
RIPK3-206ENST00000557624 POTEAQ6S8J7 498 aa18.72■□□□□ 0.59
RIPK3-206ENST00000557624 PLEKHO1Q53GL0 409 aaPredicted RBP18.71■□□□□ 0.59
RIPK3-206ENST00000557624 PKD1L3Q7Z443 1732 aa18.7■□□□□ 0.58
RIPK3-206ENST00000557624 APAF1O14727 1248 aa18.7■□□□□ 0.58
RIPK3-206ENST00000557624 RXRBP28702 533 aa18.7■□□□□ 0.58
RIPK3-206ENST00000557624 MTHFSDQ2M296 383 aaKnown RBP18.7■□□□□ 0.58
RIPK3-206ENST00000557624 AMOTQ4VCS5 1084 aa18.7■□□□□ 0.58
RIPK3-206ENST00000557624 ZCRB1Q8TBF4 217 aaKnown RBP18.7■□□□□ 0.58
RIPK3-206ENST00000557624 SPG7Q9UQ90 795 aa18.7■□□□□ 0.58
RIPK3-206ENST00000557624 LRRC37A3O60309 1634 aa18.7■□□□□ 0.58
RIPK3-206ENST00000557624 THSD7AQ9UPZ6 1657 aa18.69■□□□□ 0.58
RIPK3-206ENST00000557624 DDB1Q16531 1140 aa18.69■□□□□ 0.58
RIPK3-206ENST00000557624 ZNF530Q6P9A1 599 aaPredicted RBP18.69■□□□□ 0.58
RIPK3-206ENST00000557624 RRP7AQ9Y3A4 280 aaKnown RBP18.69■□□□□ 0.58
RIPK3-206ENST00000557624 EXOC5O00471 708 aa18.68■□□□□ 0.58
RIPK3-206ENST00000557624 NEUROD2Q15784 382 aa18.68■□□□□ 0.58
RIPK3-206ENST00000557624 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.68■□□□□ 0.58
RIPK3-206ENST00000557624 TNS2Q63HR2 1409 aa18.68■□□□□ 0.58
RIPK3-206ENST00000557624 PLEKHG2Q9H7P9 1386 aa18.68■□□□□ 0.58
RIPK3-206ENST00000557624 SEPT12Q8IYM1 358 aa18.67■□□□□ 0.58
RIPK3-206ENST00000557624 GAS2L2Q8NHY3 880 aa18.67■□□□□ 0.58
RIPK3-206ENST00000557624 DDX54Q8TDD1 881 aaKnown RBP18.67■□□□□ 0.58
RIPK3-206ENST00000557624 SHANK3Q9BYB0 1731 aa18.67■□□□□ 0.58
RIPK3-206ENST00000557624 NFE2L2Q16236 605 aa18.67■□□□□ 0.58
RIPK3-206ENST00000557624 PCDH11XQ9BZA7 1347 aa18.66■□□□□ 0.58
RIPK3-206ENST00000557624 PCDH11YQ9BZA8 1340 aa18.66■□□□□ 0.58
RIPK3-206ENST00000557624 ONECUT3O60422 494 aaPredicted RBP18.66■□□□□ 0.58
RIPK3-206ENST00000557624 TMPOP42166 694 aaKnown RBP18.66■□□□□ 0.58
RIPK3-206ENST00000557624 C1orf141Q5JVX7 400 aa18.66■□□□□ 0.58
RIPK3-206ENST00000557624 DLG5Q8TDM6 1919 aa18.66■□□□□ 0.58
RIPK3-206ENST00000557624 SALL2Q9Y467 1007 aaPredicted RBP18.65■□□□□ 0.58
RIPK3-206ENST00000557624 CYP27B1O15528 508 aa18.64■□□□□ 0.57
RIPK3-206ENST00000557624 RIPK4P57078 832 aa18.64■□□□□ 0.57
RIPK3-206ENST00000557624 PDE3BQ13370 1112 aa18.63■□□□□ 0.57
RIPK3-206ENST00000557624 PHKG2P15735 406 aa18.63■□□□□ 0.57
RIPK3-206ENST00000557624 HNRNPUQ00839 825 aaKnown RBP eCLIP18.63■□□□□ 0.57
RIPK3-206ENST00000557624 IFNL2Q8IZJ0 200 aa18.63■□□□□ 0.57
RIPK3-206ENST00000557624 MAP3K5Q99683 1374 aa18.63■□□□□ 0.57
RIPK3-206ENST00000557624 RGS12O14924 1447 aa18.62■□□□□ 0.57
RIPK3-206ENST00000557624 BRWD3Q6RI45 1802 aa18.62■□□□□ 0.57
RIPK3-206ENST00000557624 GNAT3A8MTJ3 354 aa18.62■□□□□ 0.57
RIPK3-206ENST00000557624 AKAP4Q5JQC9 854 aa18.62■□□□□ 0.57
RIPK3-206ENST00000557624 YTHDC1Q96MU7 727 aaKnown RBP18.62■□□□□ 0.57
RIPK3-206ENST00000557624 KAT6BQ8WYB5 2073 aa18.61■□□□□ 0.57
RIPK3-206ENST00000557624 MARCH10Q8NA82 808 aaPredicted RBP18.6■□□□□ 0.57
RIPK3-206ENST00000557624 MPRIPQ6WCQ1 1025 aa18.6■□□□□ 0.57
RIPK3-206ENST00000557624 RTF1Q92541 710 aaKnown RBP18.6■□□□□ 0.57
RIPK3-206ENST00000557624 DCTN1Q14203 1278 aa18.59■□□□□ 0.57
RIPK3-206ENST00000557624 FAM182BQ5T319 152 aa18.59■□□□□ 0.57
RIPK3-206ENST00000557624 VIRMAQ69YN4 1812 aaKnown RBP18.58■□□□□ 0.57
RIPK3-206ENST00000557624 LMOD3Q0VAK6 560 aa18.58■□□□□ 0.56
RIPK3-206ENST00000557624 MCM10Q7L590 875 aa18.58■□□□□ 0.56
RIPK3-206ENST00000557624 KRT27Q7Z3Y8 459 aa18.58■□□□□ 0.56
RIPK3-206ENST00000557624 TRIM35Q9UPQ4 493 aa18.58■□□□□ 0.56
RIPK3-206ENST00000557624 HSP90AB1P08238 724 aaKnown RBP18.57■□□□□ 0.56
RIPK3-206ENST00000557624 THUMPD2Q9BTF0 503 aaKnown RBP18.57■□□□□ 0.56
RIPK3-206ENST00000557624 KDM6AO15550 1401 aaPredicted RBP18.57■□□□□ 0.56
RIPK3-206ENST00000557624 DCAF5Q96JK2 942 aa18.56■□□□□ 0.56
RIPK3-206ENST00000557624 LGR6Q9HBX8 967 aa18.56■□□□□ 0.56
RIPK3-206ENST00000557624 NKX1-1Q15270 411 aaPredicted RBP18.56■□□□□ 0.56
RIPK3-206ENST00000557624 SCN11AQ9UI33 1791 aa18.55■□□□□ 0.56
RIPK3-206ENST00000557624 RNMTO43148 476 aaKnown RBP18.55■□□□□ 0.56
RIPK3-206ENST00000557624 HTATSF1O43719 755 aaKnown RBP18.55■□□□□ 0.56
RIPK3-206ENST00000557624 CENPBP07199 599 aaPredicted RBP18.55■□□□□ 0.56
RIPK3-206ENST00000557624 WWC1Q8IX03 1113 aa18.55■□□□□ 0.56
RIPK3-206ENST00000557624 NGEFQ8N5V2 710 aa18.55■□□□□ 0.56
RIPK3-206ENST00000557624 IL17REQ8NFR9 667 aa18.55■□□□□ 0.56
RIPK3-206ENST00000557624 CCDC27Q2M243 656 aa18.54■□□□□ 0.56
RIPK3-206ENST00000557624 TOGARAM1Q9Y4F4 1720 aa18.54■□□□□ 0.56
RIPK3-206ENST00000557624 DOT1LQ8TEK3 1739 aa18.53■□□□□ 0.56
RIPK3-206ENST00000557624 ADAMTS7Q9UKP4 1686 aa18.53■□□□□ 0.56
RIPK3-206ENST00000557624 CEMIPQ8WUJ3 1361 aa18.52■□□□□ 0.56
RIPK3-206ENST00000557624 SOCS7O14512 581 aa18.52■□□□□ 0.55
RIPK3-206ENST00000557624 NCBP3Q53F19 620 aaKnown RBP18.52■□□□□ 0.55
RIPK3-206ENST00000557624 SYTL4Q96C24 671 aaPredicted RBP18.52■□□□□ 0.55
RIPK3-206ENST00000557624 ACSBG1Q96GR2 724 aa18.52■□□□□ 0.55
RIPK3-206ENST00000557624 TEFQ10587 303 aa18.51■□□□□ 0.55
RIPK3-206ENST00000557624 CABP4P57796 275 aa18.5■□□□□ 0.55
RIPK3-206ENST00000557624 ZBED9Q6R2W3 1325 aa18.5■□□□□ 0.55
RIPK3-206ENST00000557624 ITGB4P16144 1822 aa18.49■□□□□ 0.55
RIPK3-206ENST00000557624 FAM196AQ6ZSG2 479 aa18.49■□□□□ 0.55
RIPK3-206ENST00000557624 SLC52A2Q9HAB3 445 aa18.49■□□□□ 0.55
RIPK3-206ENST00000557624 ZNF521Q96K83 1311 aa18.49■□□□□ 0.55
RIPK3-206ENST00000557624 ERVV-2B6SEH9 535 aa18.49■□□□□ 0.55
RIPK3-206ENST00000557624 PRIM1P49642 420 aaKnown RBP18.49■□□□□ 0.55
RIPK3-206ENST00000557624 NFATC2IPQ8NCF5 419 aa18.49■□□□□ 0.55
RIPK3-206ENST00000557624 LAS1LQ9Y4W2 734 aaKnown RBP18.49■□□□□ 0.55
RIPK3-206ENST00000557624 MRC1P22897 1456 aa18.48■□□□□ 0.55
RIPK3-206ENST00000557624 CALD1Q05682 793 aaKnown RBP18.48■□□□□ 0.55
RIPK3-206ENST00000557624 TMOD3Q9NYL9 352 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms