RNA–Protein interactions for RNA: ENST00000557517.1

PSMC6-215, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-215ENST00000557517 NLRP2Q9NX02 1062 aa14.79□□□□□ -0.04
PSMC6-215ENST00000557517 CASZ1Q86V15 1759 aa14.78□□□□□ -0.04
PSMC6-215ENST00000557517 OVOS2A0A0G2JMS6 1433 aa14.78□□□□□ -0.04
PSMC6-215ENST00000557517 PEAK1Q9H792 1746 aa14.78□□□□□ -0.04
PSMC6-215ENST00000557517 IL2RBP14784 551 aa14.77□□□□□ -0.05
PSMC6-215ENST00000557517 FBLN1P23142 703 aa14.77□□□□□ -0.05
PSMC6-215ENST00000557517 PTF1AQ7RTS3 328 aa14.77□□□□□ -0.05
PSMC6-215ENST00000557517 CARD14Q9BXL6 1004 aa14.77□□□□□ -0.05
PSMC6-215ENST00000557517 PPP1R1BQ9UD71 204 aaPredicted RBP14.77□□□□□ -0.05
PSMC6-215ENST00000557517 MON2Q7Z3U7 1717 aa14.77□□□□□ -0.05
PSMC6-215ENST00000557517 SBF2Q86WG5 1849 aa14.76□□□□□ -0.05
PSMC6-215ENST00000557517 MAP3K19Q56UN5 1328 aa14.76□□□□□ -0.05
PSMC6-215ENST00000557517 PROM2Q8N271 834 aa14.76□□□□□ -0.05
PSMC6-215ENST00000557517 HOXC9P31274 260 aa14.75□□□□□ -0.05
PSMC6-215ENST00000557517 GGNBP2Q9H3C7 697 aa14.75□□□□□ -0.05
PSMC6-215ENST00000557517 USP54Q70EL1 1684 aa14.74□□□□□ -0.05
PSMC6-215ENST00000557517 AMPHP49418 695 aa14.73□□□□□ -0.05
PSMC6-215ENST00000557517 CCER1Q8TC90 406 aaPredicted RBP14.73□□□□□ -0.05
PSMC6-215ENST00000557517 MYOM1P52179 1685 aa14.71□□□□□ -0.05
PSMC6-215ENST00000557517 LRRC37A3O60309 1634 aa14.71□□□□□ -0.05
PSMC6-215ENST00000557517 EVX2Q03828 476 aa14.71□□□□□ -0.05
PSMC6-215ENST00000557517 RRS1Q15050 365 aaKnown RBP14.71□□□□□ -0.05
PSMC6-215ENST00000557517 LTV1Q96GA3 475 aaPredicted RBP14.71□□□□□ -0.05
PSMC6-215ENST00000557517 ANO8Q9HCE9 1232 aaPredicted RBP14.71□□□□□ -0.05
PSMC6-215ENST00000557517 CHD4Q14839 1912 aa14.7□□□□□ -0.06
PSMC6-215ENST00000557517 EIF4G2P78344 907 aaKnown RBP eCLIP14.7□□□□□ -0.06
PSMC6-215ENST00000557517 ZNF784Q8NCA9 323 aaPredicted RBP14.7□□□□□ -0.06
PSMC6-215ENST00000557517 TNS2Q63HR2 1409 aa14.69□□□□□ -0.06
PSMC6-215ENST00000557517 TXNRD1Q16881 649 aa14.69□□□□□ -0.06
PSMC6-215ENST00000557517 NBPF6Q5VWK0 638 aa14.69□□□□□ -0.06
PSMC6-215ENST00000557517 NBPF4Q96M43 638 aa14.69□□□□□ -0.06
PSMC6-215ENST00000557517 HSP90AB2PQ58FF8 381 aa14.68□□□□□ -0.06
PSMC6-215ENST00000557517 KIF24Q5T7B8 1368 aa14.68□□□□□ -0.06
PSMC6-215ENST00000557517 WNK3Q9BYP7 1800 aa14.68□□□□□ -0.06
PSMC6-215ENST00000557517 UTRNP46939 3433 aa14.67□□□□□ -0.06
PSMC6-215ENST00000557517 PTGER2P43116 358 aa14.67□□□□□ -0.06
PSMC6-215ENST00000557517 RTL1A6NKG5 1358 aa14.67□□□□□ -0.06
PSMC6-215ENST00000557517 INSRP06213 1382 aa14.66□□□□□ -0.06
PSMC6-215ENST00000557517 HSPA5P11021 654 aaKnown RBP14.66□□□□□ -0.06
PSMC6-215ENST00000557517 ZCRB1Q8TBF4 217 aaKnown RBP14.66□□□□□ -0.06
PSMC6-215ENST00000557517 DDX54Q8TDD1 881 aaKnown RBP14.66□□□□□ -0.06
PSMC6-215ENST00000557517 ACSBG1Q96GR2 724 aa14.66□□□□□ -0.06
PSMC6-215ENST00000557517 PDGFDQ9GZP0 370 aaPredicted RBP14.66□□□□□ -0.06
PSMC6-215ENST00000557517 CGNL1Q0VF96 1302 aa14.65□□□□□ -0.06
PSMC6-215ENST00000557517 RGPD5Q99666 1765 aa14.63□□□□□ -0.07
PSMC6-215ENST00000557517 ZBTB7AO95365 584 aa14.63□□□□□ -0.07
PSMC6-215ENST00000557517 SLC15A2Q16348 729 aa14.63□□□□□ -0.07
PSMC6-215ENST00000557517 NSD3Q9BZ95 1437 aa14.63□□□□□ -0.07
PSMC6-215ENST00000557517 WASHC2AQ641Q2 1341 aa14.63□□□□□ -0.07
PSMC6-215ENST00000557517 FLT4P35916 1363 aa14.62□□□□□ -0.07
PSMC6-215ENST00000557517 PRR29P0C7W0 189 aa14.62□□□□□ -0.07
PSMC6-215ENST00000557517 SGIP1Q9BQI5 828 aa14.62□□□□□ -0.07
PSMC6-215ENST00000557517 SYT17Q9BSW7 474 aa14.62□□□□□ -0.07
PSMC6-215ENST00000557517 EMILIN1Q9Y6C2 1016 aa14.62□□□□□ -0.07
PSMC6-215ENST00000557517 SENP3-EIF4A1A0A087X0R7 540 aa14.61□□□□□ -0.07
PSMC6-215ENST00000557517 PRIM1P49642 420 aaKnown RBP14.61□□□□□ -0.07
PSMC6-215ENST00000557517 C1QTNF8P60827 252 aa14.61□□□□□ -0.07
PSMC6-215ENST00000557517 RAPGEF4Q8WZA2 1011 aa14.61□□□□□ -0.07
PSMC6-215ENST00000557517 PANK3Q9H999 370 aa14.61□□□□□ -0.07
PSMC6-215ENST00000557517 POLKQ9UBT6 870 aa14.61□□□□□ -0.07
PSMC6-215ENST00000557517 FHDC1Q9C0D6 1143 aaPredicted RBP14.6□□□□□ -0.07
PSMC6-215ENST00000557517 LRRC4BQ9NT99 713 aa14.6□□□□□ -0.07
PSMC6-215ENST00000557517 STK32BQ9NY57 414 aa14.6□□□□□ -0.07
PSMC6-215ENST00000557517 MAP3K5Q99683 1374 aa14.6□□□□□ -0.07
PSMC6-215ENST00000557517 TATP17735 454 aaPredicted RBP14.59□□□□□ -0.07
PSMC6-215ENST00000557517 USHBP1Q8N6Y0 703 aa14.59□□□□□ -0.07
PSMC6-215ENST00000557517 LTN1O94822 1766 aa14.59□□□□□ -0.07
PSMC6-215ENST00000557517 SMG6Q86US8 1419 aaKnown RBP14.58□□□□□ -0.07
PSMC6-215ENST00000557517 MEGF6O75095 1541 aa14.58□□□□□ -0.08
PSMC6-215ENST00000557517 C19orf67A6NJJ6 358 aa14.58□□□□□ -0.08
PSMC6-215ENST00000557517 PPM1GO15355 546 aaPredicted RBP14.58□□□□□ -0.08
PSMC6-215ENST00000557517 SLC27A3Q5K4L6 730 aa14.58□□□□□ -0.08
PSMC6-215ENST00000557517 CHADLQ6NUI6 762 aa14.58□□□□□ -0.08
PSMC6-215ENST00000557517 POLR3GLQ9BT43 218 aa14.58□□□□□ -0.08
PSMC6-215ENST00000557517 MTFR1LQ9H019 292 aa14.58□□□□□ -0.08
PSMC6-215ENST00000557517 PAPPAQ13219 1627 aa14.57□□□□□ -0.08
PSMC6-215ENST00000557517 IFFO2Q5TF58 517 aa14.56□□□□□ -0.08
PSMC6-215ENST00000557517 SYTL4Q96C24 671 aaPredicted RBP14.56□□□□□ -0.08
PSMC6-215ENST00000557517 EYA1Q99502 592 aa14.56□□□□□ -0.08
PSMC6-215ENST00000557517 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.56□□□□□ -0.089e-9■■□□□ 13.4
PSMC6-215ENST00000557517 NHSQ6T4R5 1651 aa14.55□□□□□ -0.08
PSMC6-215ENST00000557517 CYP27B1O15528 508 aa14.55□□□□□ -0.08
PSMC6-215ENST00000557517 NKX1-1Q15270 411 aaPredicted RBP14.55□□□□□ -0.08
PSMC6-215ENST00000557517 NSD2O96028 1365 aa14.55□□□□□ -0.08
PSMC6-215ENST00000557517 PCDH11XQ9BZA7 1347 aa14.54□□□□□ -0.08
PSMC6-215ENST00000557517 PCDH11YQ9BZA8 1340 aa14.54□□□□□ -0.08
PSMC6-215ENST00000557517 NCAPD2Q15021 1401 aa14.54□□□□□ -0.08
PSMC6-215ENST00000557517 FAM208AQ9UK61 1670 aaKnown RBP14.53□□□□□ -0.08
PSMC6-215ENST00000557517 ZNF827Q17R98 1081 aa14.53□□□□□ -0.08
PSMC6-215ENST00000557517 COL24A1Q17RW2 1714 aa14.52□□□□□ -0.08
PSMC6-215ENST00000557517 TNNT2P45379 298 aaPredicted RBP14.52□□□□□ -0.09
PSMC6-215ENST00000557517 EIF4A2Q14240 407 aaKnown RBP14.52□□□□□ -0.09
PSMC6-215ENST00000557517 ARXQ96QS3 562 aa14.52□□□□□ -0.09
PSMC6-215ENST00000557517 SPG7Q9UQ90 795 aa14.52□□□□□ -0.09
PSMC6-215ENST00000557517 PER1O15534 1290 aaPredicted RBP14.51□□□□□ -0.09
PSMC6-215ENST00000557517 SLC16A10Q8TF71 515 aa14.51□□□□□ -0.09
PSMC6-215ENST00000557517 KNSTRNQ9Y448 316 aa14.51□□□□□ -0.09
PSMC6-215ENST00000557517 QSER1Q2KHR3 1735 aa14.5□□□□□ -0.09
PSMC6-215ENST00000557517 KIF7Q2M1P5 1343 aa14.5□□□□□ -0.09
PSMC6-215ENST00000557517 CEP350Q5VT06 3117 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms