RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 EVA1CP58658 441 aa8.59□□□□□ -1.03
VPS33B-207ENST00000557470 NBPF8Q3BBV2 869 aa8.59□□□□□ -1.03
VPS33B-207ENST00000557470 NBPF14Q5TI25 921 aa8.59□□□□□ -1.03
VPS33B-207ENST00000557470 TCP11L2Q8N4U5 519 aa8.59□□□□□ -1.03
VPS33B-207ENST00000557470 DCAF11Q8TEB1 546 aa8.59□□□□□ -1.03
VPS33B-207ENST00000557470 TOPAZ1Q8N9V7 1692 aa8.59□□□□□ -1.03
VPS33B-207ENST00000557470 LMO7Q8WWI1 1683 aa8.59□□□□□ -1.03
VPS33B-207ENST00000557470 POTEMA6NI47 508 aa8.58□□□□□ -1.04
VPS33B-207ENST00000557470 BBXQ8WY36 941 aaPredicted RBP8.58□□□□□ -1.04
VPS33B-207ENST00000557470 L3MBTL3Q96JM7 780 aaPredicted RBP8.58□□□□□ -1.04
VPS33B-207ENST00000557470 CDK19Q9BWU1 502 aa8.58□□□□□ -1.04
VPS33B-207ENST00000557470 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.58□□□□□ -1.04
VPS33B-207ENST00000557470 CPDO75976 1380 aa8.58□□□□□ -1.04
VPS33B-207ENST00000557470 RAB3GAP2Q9H2M9 1393 aa8.58□□□□□ -1.04
VPS33B-207ENST00000557470 USP19O94966 1318 aa8.57□□□□□ -1.04
VPS33B-207ENST00000557470 ACEP12821 1306 aa8.57□□□□□ -1.04
VPS33B-207ENST00000557470 POTEGQ6S5H5 508 aa8.57□□□□□ -1.04
VPS33B-207ENST00000557470 PAXIP1Q6ZW49 1069 aaPredicted RBP8.57□□□□□ -1.04
VPS33B-207ENST00000557470 SPON1Q9HCB6 807 aa8.57□□□□□ -1.04
VPS33B-207ENST00000557470 PPP1R1BQ9UD71 204 aaPredicted RBP8.57□□□□□ -1.04
VPS33B-207ENST00000557470 NINLQ9Y2I6 1382 aa8.57□□□□□ -1.04
VPS33B-207ENST00000557470 COL5A2P05997 1499 aaPredicted RBP8.57□□□□□ -1.04
VPS33B-207ENST00000557470 PLEKHG3A1L390 1219 aa8.56□□□□□ -1.04
VPS33B-207ENST00000557470 KCNQ2O43526 872 aa8.56□□□□□ -1.04
VPS33B-207ENST00000557470 ABTB2Q8N961 1025 aa8.56□□□□□ -1.04
VPS33B-207ENST00000557470 THRAP3Q9Y2W1 955 aaKnown RBP8.56□□□□□ -1.04
VPS33B-207ENST00000557470 PARP4Q9UKK3 1724 aaKnown RBP8.56□□□□□ -1.04
VPS33B-207ENST00000557470 PEAK1Q9H792 1746 aa8.55□□□□□ -1.04
VPS33B-207ENST00000557470 C3orf67Q6ZVT6 689 aa8.55□□□□□ -1.04
VPS33B-207ENST00000557470 STAC3Q96MF2 364 aa8.55□□□□□ -1.04
VPS33B-207ENST00000557470 BCL11BQ9C0K0 894 aaPredicted RBP8.55□□□□□ -1.04
VPS33B-207ENST00000557470 ANO8Q9HCE9 1232 aaPredicted RBP8.55□□□□□ -1.04
VPS33B-207ENST00000557470 OVOS2A0A0G2JMS6 1433 aa8.54□□□□□ -1.04
VPS33B-207ENST00000557470 OVOS2A0A0J9YW53 1432 aa8.54□□□□□ -1.04
VPS33B-207ENST00000557470 CRB1P82279 1406 aa8.54□□□□□ -1.04
VPS33B-207ENST00000557470 OVOS2Q6IE36 1432 aa8.54□□□□□ -1.04
VPS33B-207ENST00000557470 GCP02774 474 aa8.54□□□□□ -1.04
VPS33B-207ENST00000557470 NBR1Q14596 966 aa8.54□□□□□ -1.04
VPS33B-207ENST00000557470 CFAP44Q96MT7 982 aa8.54□□□□□ -1.04
VPS33B-207ENST00000557470 LRRC37A3O60309 1634 aa8.54□□□□□ -1.04
VPS33B-207ENST00000557470 RGPD3A6NKT7 1758 aaPredicted RBP8.53□□□□□ -1.04
VPS33B-207ENST00000557470 RGPD4Q7Z3J3 1758 aa8.53□□□□□ -1.04
VPS33B-207ENST00000557470 C11orf95C9JLR9 678 aaPredicted RBP8.53□□□□□ -1.04
VPS33B-207ENST00000557470 PTF1AQ7RTS3 328 aa8.53□□□□□ -1.04
VPS33B-207ENST00000557470 NLRP13Q86W25 1043 aa8.53□□□□□ -1.04
VPS33B-207ENST00000557470 MS4A4AQ96JQ5 239 aa8.53□□□□□ -1.04
VPS33B-207ENST00000557470 BOLA1Q9Y3E2 137 aa8.53□□□□□ -1.04
VPS33B-207ENST00000557470 STK24Q9Y6E0 443 aa8.53□□□□□ -1.04
VPS33B-207ENST00000557470 PPIP5K1Q6PFW1 1433 aa8.53□□□□□ -1.04
VPS33B-207ENST00000557470 CASZ1Q86V15 1759 aa8.53□□□□□ -1.04
VPS33B-207ENST00000557470 ZBTB7CA1YPR0 619 aa8.52□□□□□ -1.05
VPS33B-207ENST00000557470 PLSCR1O15162 318 aa8.52□□□□□ -1.05
VPS33B-207ENST00000557470 PDGFDQ9GZP0 370 aaPredicted RBP8.52□□□□□ -1.05
VPS33B-207ENST00000557470 AATKQ6ZMQ8 1374 aa8.51□□□□□ -1.05
VPS33B-207ENST00000557470 SLIT3O75094 1523 aa8.51□□□□□ -1.05
VPS33B-207ENST00000557470 STK25O00506 426 aa8.51□□□□□ -1.05
VPS33B-207ENST00000557470 SOX12O15370 315 aa8.51□□□□□ -1.05
VPS33B-207ENST00000557470 ST18O60284 1047 aa8.51□□□□□ -1.05
VPS33B-207ENST00000557470 ZBTB7AO95365 584 aa8.51□□□□□ -1.05
VPS33B-207ENST00000557470 SRPK2P78362 688 aaKnown RBP8.51□□□□□ -1.05
VPS33B-207ENST00000557470 DDB1Q16531 1140 aa8.51□□□□□ -1.05
VPS33B-207ENST00000557470 UTRNP46939 3433 aa8.51□□□□□ -1.05
VPS33B-207ENST00000557470 SBF2Q86WG5 1849 aa8.51□□□□□ -1.05
VPS33B-207ENST00000557470 MYOM1P52179 1685 aa8.5□□□□□ -1.05
VPS33B-207ENST00000557470 USP6P35125 1406 aa8.5□□□□□ -1.05
VPS33B-207ENST00000557470 PTGER2P43116 358 aa8.5□□□□□ -1.05
VPS33B-207ENST00000557470 NBPF1Q3BBV0 1214 aa8.5□□□□□ -1.05
VPS33B-207ENST00000557470 TOM1L2Q6ZVM7 507 aa8.5□□□□□ -1.05
VPS33B-207ENST00000557470 MARCH10Q8NA82 808 aaPredicted RBP8.5□□□□□ -1.05
VPS33B-207ENST00000557470 BRD4O60885 1362 aaPredicted RBP8.49□□□□□ -1.05
VPS33B-207ENST00000557470 KIAA1210Q9ULL0 1709 aa8.49□□□□□ -1.05
VPS33B-207ENST00000557470 BCL9O00512 1426 aa8.49□□□□□ -1.05
VPS33B-207ENST00000557470 COL18A1P39060 1754 aa8.49□□□□□ -1.05
VPS33B-207ENST00000557470 NLRP6P59044 892 aa8.49□□□□□ -1.05
VPS33B-207ENST00000557470 ZNF784Q8NCA9 323 aaPredicted RBP8.49□□□□□ -1.05
VPS33B-207ENST00000557470 TMEM121BQ9BXQ6 578 aaPredicted RBP8.49□□□□□ -1.05
VPS33B-207ENST00000557470 AXIN2Q9Y2T1 843 aa8.49□□□□□ -1.05
VPS33B-207ENST00000557470 WNK3Q9BYP7 1800 aa8.49□□□□□ -1.05
VPS33B-207ENST00000557470 WDR17Q8IZU2 1322 aa8.49□□□□□ -1.05
VPS33B-207ENST00000557470 CENPJQ9HC77 1338 aaPredicted RBP8.49□□□□□ -1.05
VPS33B-207ENST00000557470 CPSF1Q10570 1443 aaKnown RBP8.48□□□□□ -1.05
VPS33B-207ENST00000557470 G3V3G9 751 aa8.48□□□□□ -1.05
VPS33B-207ENST00000557470 CABP1Q9NZU7 370 aa8.48□□□□□ -1.05
VPS33B-207ENST00000557470 PIK3C2AO00443 1686 aa8.48□□□□□ -1.05
VPS33B-207ENST00000557470 TXNRD1Q16881 649 aa8.47□□□□□ -1.05
VPS33B-207ENST00000557470 CDCA7Q9BWT1 371 aaPredicted RBP8.47□□□□□ -1.05
VPS33B-207ENST00000557470 MFRPQ9BY79 579 aa8.47□□□□□ -1.05
VPS33B-207ENST00000557470 FHDC1Q9C0D6 1143 aaPredicted RBP8.47□□□□□ -1.05
VPS33B-207ENST00000557470 STK32BQ9NY57 414 aa8.47□□□□□ -1.05
VPS33B-207ENST00000557470 PODXL2Q9NZ53 605 aa8.47□□□□□ -1.05
VPS33B-207ENST00000557470 AKAP12Q02952 1782 aa8.47□□□□□ -1.05
VPS33B-207ENST00000557470 QRICH2Q9H0J4 1663 aa8.46□□□□□ -1.05
VPS33B-207ENST00000557470 SLC15A2Q16348 729 aa8.46□□□□□ -1.06
VPS33B-207ENST00000557470 ARHGEF25Q86VW2 580 aa8.46□□□□□ -1.06
VPS33B-207ENST00000557470 MICALL2Q8IY33 904 aa8.46□□□□□ -1.06
VPS33B-207ENST00000557470 FBXO22Q8NEZ5 403 aa8.46□□□□□ -1.06
VPS33B-207ENST00000557470 SYT17Q9BSW7 474 aa8.46□□□□□ -1.06
VPS33B-207ENST00000557470 CARD10Q9BWT7 1032 aa8.46□□□□□ -1.06
VPS33B-207ENST00000557470 CSB-PGBD3P0DP91 1061 aa8.45□□□□□ -1.06
VPS33B-207ENST00000557470 MTFR1LQ9H019 292 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms