RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 FMNL2Q96PY5 1086 aa10.28□□□□□ -0.76
SYNE3-205ENST00000557275 TNIP1Q15025 636 aa10.28□□□□□ -0.76
SYNE3-205ENST00000557275 PPFIA2O75334 1257 aa10.28□□□□□ -0.76
SYNE3-205ENST00000557275 RNF168Q8IYW5 571 aaPredicted RBP10.28□□□□□ -0.76
SYNE3-205ENST00000557275 IRX3P78415 501 aaPredicted RBP10.28□□□□□ -0.76
SYNE3-205ENST00000557275 GOLIM4O00461 696 aa10.28□□□□□ -0.76
SYNE3-205ENST00000557275 DYNC1I1O14576 645 aa10.28□□□□□ -0.76
SYNE3-205ENST00000557275 OPA1O60313 960 aa10.28□□□□□ -0.76
SYNE3-205ENST00000557275 ACTN2P35609 894 aa10.28□□□□□ -0.76
SYNE3-205ENST00000557275 FBXW7Q969H0 707 aa10.28□□□□□ -0.76
SYNE3-205ENST00000557275 PAXBP1Q9Y5B6 917 aa10.28□□□□□ -0.76
SYNE3-205ENST00000557275 CKAP4Q07065 602 aaKnown RBP10.27□□□□□ -0.76
SYNE3-205ENST00000557275 PRPHP41219 470 aa10.27□□□□□ -0.76
SYNE3-205ENST00000557275 GRPEL1Q9HAV7 217 aa10.27□□□□□ -0.76
SYNE3-205ENST00000557275 CYP46A1Q9Y6A2 500 aa10.27□□□□□ -0.76
SYNE3-205ENST00000557275 MYO15BQ96JP2 1530 aa10.27□□□□□ -0.76
SYNE3-205ENST00000557275 PKD2Q13563 968 aa10.27□□□□□ -0.76
SYNE3-205ENST00000557275 CCDC14Q49A88 953 aa10.27□□□□□ -0.76
SYNE3-205ENST00000557275 MSL1Q68DK7 614 aa10.27□□□□□ -0.77
SYNE3-205ENST00000557275 KIAA1524Q8TCG1 905 aa10.27□□□□□ -0.77
SYNE3-205ENST00000557275 A0A1B0GUA9 196 aa10.27□□□□□ -0.77
SYNE3-205ENST00000557275 SIN3AQ96ST3 1273 aa10.27□□□□□ -0.77
SYNE3-205ENST00000557275 PRPF40AO75400 957 aaKnown RBP10.27□□□□□ -0.77
SYNE3-205ENST00000557275 SEPT10Q9P0V9 454 aa10.27□□□□□ -0.77
SYNE3-205ENST00000557275 PPP6R1Q9UPN7 881 aa10.27□□□□□ -0.77
SYNE3-205ENST00000557275 TSG101Q99816 390 aa10.26□□□□□ -0.77
SYNE3-205ENST00000557275 CCDC113Q9H0I3 377 aa10.26□□□□□ -0.77
SYNE3-205ENST00000557275 MIPOL1Q8TD10 442 aa10.26□□□□□ -0.77
SYNE3-205ENST00000557275 IQCGQ9H095 443 aaKnown RBP10.26□□□□□ -0.77
SYNE3-205ENST00000557275 LARP1Q6PKG0 1096 aaKnown RBP10.26□□□□□ -0.77
SYNE3-205ENST00000557275 GPATCH11Q8N954 259 aa10.26□□□□□ -0.77
SYNE3-205ENST00000557275 FKBP5Q13451 457 aaPredicted RBP10.26□□□□□ -0.77
SYNE3-205ENST00000557275 CCDC155Q8N6L0 562 aa10.26□□□□□ -0.77
SYNE3-205ENST00000557275 PRIMPOLQ96LW4 560 aa10.26□□□□□ -0.77
SYNE3-205ENST00000557275 SAFB2Q14151 953 aaKnown RBP eCLIP10.26□□□□□ -0.77
SYNE3-205ENST00000557275 TCHPQ9BT92 498 aa10.26□□□□□ -0.77
SYNE3-205ENST00000557275 RNF214Q8ND24 703 aa10.26□□□□□ -0.77
SYNE3-205ENST00000557275 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.26□□□□□ -0.77
SYNE3-205ENST00000557275 UBE4AQ14139 1066 aa10.26□□□□□ -0.77
SYNE3-205ENST00000557275 MAP7D1Q3KQU3 841 aa10.26□□□□□ -0.77
SYNE3-205ENST00000557275 CEP128Q6ZU80 1094 aa10.26□□□□□ -0.77
SYNE3-205ENST00000557275 KIF5BP33176 963 aa10.25□□□□□ -0.77
SYNE3-205ENST00000557275 SPC24Q8NBT2 197 aa10.25□□□□□ -0.77
SYNE3-205ENST00000557275 ZSCAN31Q96LW9 406 aaPredicted RBP10.25□□□□□ -0.77
SYNE3-205ENST00000557275 VCX3BQ9H321 246 aa10.25□□□□□ -0.77
SYNE3-205ENST00000557275 JAKMIP2Q96AA8 810 aa10.25□□□□□ -0.77
SYNE3-205ENST00000557275 NUP62CLQ9H1M0 184 aa10.25□□□□□ -0.77
SYNE3-205ENST00000557275 STK26Q9P289 416 aa10.25□□□□□ -0.77
SYNE3-205ENST00000557275 RASAL2Q9UJF2 1139 aa10.25□□□□□ -0.77
SYNE3-205ENST00000557275 LUC7L2Q9Y383 392 aaKnown RBP10.25□□□□□ -0.77
SYNE3-205ENST00000557275 COMMD10Q9Y6G5 202 aa10.25□□□□□ -0.77
SYNE3-205ENST00000557275 WASHC4Q2M389 1173 aa10.25□□□□□ -0.77
SYNE3-205ENST00000557275 SMG6Q86US8 1419 aaKnown RBP10.25□□□□□ -0.77
SYNE3-205ENST00000557275 UBTFL1P0CB47 393 aaPredicted RBP10.25□□□□□ -0.77
SYNE3-205ENST00000557275 PPP1R14CQ8TAE6 165 aa10.25□□□□□ -0.77
SYNE3-205ENST00000557275 VIMP08670 466 aaKnown RBP10.25□□□□□ -0.77
SYNE3-205ENST00000557275 RNF187Q5TA31 235 aaPredicted RBP10.25□□□□□ -0.77
SYNE3-205ENST00000557275 CCDC50Q8IVM0 306 aa10.25□□□□□ -0.77
SYNE3-205ENST00000557275 GCC1Q96CN9 775 aa10.25□□□□□ -0.77
SYNE3-205ENST00000557275 ALDH3A1P30838 453 aa10.25□□□□□ -0.77
SYNE3-205ENST00000557275 GMNNO75496 209 aa10.25□□□□□ -0.77
SYNE3-205ENST00000557275 KIF5AQ12840 1032 aa10.25□□□□□ -0.77
SYNE3-205ENST00000557275 CCDC174Q6PII3 467 aa10.25□□□□□ -0.77
SYNE3-205ENST00000557275 PPFIBP2Q8ND30 876 aa10.25□□□□□ -0.77
SYNE3-205ENST00000557275 PDS5BQ9NTI5 1447 aa10.25□□□□□ -0.77
SYNE3-205ENST00000557275 MAP3K11Q16584 847 aa10.25□□□□□ -0.77
SYNE3-205ENST00000557275 FMNL3Q8IVF7 1028 aa10.25□□□□□ -0.77
SYNE3-205ENST00000557275 CTNNA3Q9UI47 895 aa10.25□□□□□ -0.77
SYNE3-205ENST00000557275 CTNNA2P26232 953 aa10.24□□□□□ -0.77
SYNE3-205ENST00000557275 CLIP2Q9UDT6 1046 aa10.24□□□□□ -0.77
SYNE3-205ENST00000557275 CNTLNQ9NXG0 1405 aa10.24□□□□□ -0.77
SYNE3-205ENST00000557275 C10orf67Q8IYJ2 551 aa10.24□□□□□ -0.77
SYNE3-205ENST00000557275 ARID4AP29374 1257 aaPredicted RBP10.24□□□□□ -0.77
SYNE3-205ENST00000557275 TTC21AQ8NDW8 1320 aa10.24□□□□□ -0.77
SYNE3-205ENST00000557275 IPO4Q8TEX9 1081 aaKnown RBP10.24□□□□□ -0.77
SYNE3-205ENST00000557275 FSD1Q9BTV5 496 aa10.24□□□□□ -0.77
SYNE3-205ENST00000557275 FEZ2Q9UHY8 353 aaPredicted RBP10.24□□□□□ -0.77
SYNE3-205ENST00000557275 ATP2A1O14983 1001 aa10.24□□□□□ -0.77
SYNE3-205ENST00000557275 PPP1R9BQ96SB3 815 aa10.24□□□□□ -0.77
SYNE3-205ENST00000557275 SCAND2PQ9GZW5 306 aaPredicted RBP10.24□□□□□ -0.77
SYNE3-205ENST00000557275 GGT6Q6P531 493 aa10.24□□□□□ -0.77
SYNE3-205ENST00000557275 SPATA32Q96LK8 384 aa10.24□□□□□ -0.77
SYNE3-205ENST00000557275 CCDC196A0A1B0GTZ2 297 aa10.23□□□□□ -0.77
SYNE3-205ENST00000557275 FIBPO43427 364 aa10.23□□□□□ -0.77
SYNE3-205ENST00000557275 EVA1CP58658 441 aa10.23□□□□□ -0.77
SYNE3-205ENST00000557275 CFAP100Q494V2 611 aa10.23□□□□□ -0.77
SYNE3-205ENST00000557275 NCAPGQ9BPX3 1015 aa10.23□□□□□ -0.77
SYNE3-205ENST00000557275 SRRTQ9BXP5 876 aaKnown RBP10.23□□□□□ -0.77
SYNE3-205ENST00000557275 CCDC69A6NI79 296 aa10.23□□□□□ -0.77
SYNE3-205ENST00000557275 LIG1P18858 919 aa10.23□□□□□ -0.77
SYNE3-205ENST00000557275 SEPT14Q6ZU15 432 aa10.23□□□□□ -0.77
SYNE3-205ENST00000557275 CCDC171Q6TFL3 1326 aa10.23□□□□□ -0.77
SYNE3-205ENST00000557275 CCDC160A6NGH7 325 aa10.23□□□□□ -0.77
SYNE3-205ENST00000557275 CASTP20810 708 aaKnown RBP10.23□□□□□ -0.77
SYNE3-205ENST00000557275 HSF2BPO75031 334 aa10.23□□□□□ -0.77
SYNE3-205ENST00000557275 NBPF1Q3BBV0 1214 aa10.23□□□□□ -0.77
SYNE3-205ENST00000557275 VCXQ9H320 206 aa10.23□□□□□ -0.77
SYNE3-205ENST00000557275 ANO10Q9NW15 660 aa10.23□□□□□ -0.77
SYNE3-205ENST00000557275 CWC25Q9NXE8 425 aaPredicted RBP10.23□□□□□ -0.77
SYNE3-205ENST00000557275 USP37Q86T82 979 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms