RNA–Protein interactions for RNA: ENST00000557261.1

FOXN3-215, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-215ENST00000557261 FAM69CQ0P6D2 419 aa8.87□□□□□ -0.99
FOXN3-215ENST00000557261 NR1H3Q13133 447 aa8.87□□□□□ -0.99
FOXN3-215ENST00000557261 CCER1Q8TC90 406 aaPredicted RBP8.87□□□□□ -0.99
FOXN3-215ENST00000557261 MRRFQ96E11 262 aaKnown RBP8.87□□□□□ -0.99
FOXN3-215ENST00000557261 HPS5Q9UPZ3 1129 aa8.87□□□□□ -0.99
FOXN3-215ENST00000557261 PREX2Q70Z35 1606 aa8.87□□□□□ -0.99
FOXN3-215ENST00000557261 USP17L5A8MUK1 530 aa8.86□□□□□ -0.99
FOXN3-215ENST00000557261 NYAP1Q6ZVC0 841 aa8.86□□□□□ -0.99
FOXN3-215ENST00000557261 ARAP3Q8WWN8 1544 aa8.85□□□□□ -0.99
FOXN3-215ENST00000557261 ABCC10Q5T3U5 1492 aa8.85□□□□□ -0.99
FOXN3-215ENST00000557261 ITGBL1O95965 494 aaPredicted RBP8.85□□□□□ -0.99
FOXN3-215ENST00000557261 CFHP08603 1231 aa8.85□□□□□ -0.99
FOXN3-215ENST00000557261 ZNF16P17020 682 aaPredicted RBP8.85□□□□□ -0.99
FOXN3-215ENST00000557261 RSPH4AQ5TD94 716 aa8.85□□□□□ -0.99
FOXN3-215ENST00000557261 TSR3Q9UJK0 312 aaKnown RBP8.85□□□□□ -0.99
FOXN3-215ENST00000557261 AKNAQ7Z591 1439 aa8.85□□□□□ -0.99
FOXN3-215ENST00000557261 CROCC2H7BZ55 1655 aa8.85□□□□□ -0.99
FOXN3-215ENST00000557261 DNMT1P26358 1616 aaKnown RBP8.84□□□□□ -0.99
FOXN3-215ENST00000557261 SOWAHDA6NJG2 315 aa8.84□□□□□ -0.99
FOXN3-215ENST00000557261 USP17L15C9J2P7 530 aa8.84□□□□□ -0.99
FOXN3-215ENST00000557261 USP17L10C9JJH3 530 aa8.84□□□□□ -0.99
FOXN3-215ENST00000557261 USP17L13C9JLJ4 530 aa8.84□□□□□ -0.99
FOXN3-215ENST00000557261 USP17L12C9JPN9 530 aa8.84□□□□□ -0.99
FOXN3-215ENST00000557261 USP17L11C9JVI0 530 aa8.84□□□□□ -0.99
FOXN3-215ENST00000557261 USP17L21D6R901 530 aa8.84□□□□□ -0.99
FOXN3-215ENST00000557261 USP17L18D6R9N7 530 aa8.84□□□□□ -0.99
FOXN3-215ENST00000557261 USP17L22D6RA61 530 aa8.84□□□□□ -0.99
FOXN3-215ENST00000557261 USP17L17D6RBQ6 530 aa8.84□□□□□ -0.99
FOXN3-215ENST00000557261 USP17L19D6RCP7 530 aa8.84□□□□□ -0.99
FOXN3-215ENST00000557261 USP17L20D6RJB6 530 aa8.84□□□□□ -0.99
FOXN3-215ENST00000557261 USP17L24Q0WX57 530 aa8.84□□□□□ -0.99
FOXN3-215ENST00000557261 MYO5CQ9NQX4 1742 aa8.84□□□□□ -0.99
FOXN3-215ENST00000557261 GCC2Q8IWJ2 1684 aa8.84□□□□□ -0.99
FOXN3-215ENST00000557261 PUS10Q3MIT2 529 aaKnown RBP8.83□□□□□ -1
FOXN3-215ENST00000557261 B4GALNT3Q6L9W6 998 aa8.83□□□□□ -1
FOXN3-215ENST00000557261 PPARGC1BQ86YN6 1023 aaKnown RBP8.83□□□□□ -1
FOXN3-215ENST00000557261 MKRN1Q9UHC7 482 aaKnown RBP8.83□□□□□ -1
FOXN3-215ENST00000557261 ADGBQ8N7X0 1667 aa8.82□□□□□ -1
FOXN3-215ENST00000557261 KCNH2Q12809 1159 aa8.82□□□□□ -1
FOXN3-215ENST00000557261 SAMD7Q7Z3H4 446 aa8.82□□□□□ -1
FOXN3-215ENST00000557261 CDC42BPBQ9Y5S2 1711 aa8.82□□□□□ -1
FOXN3-215ENST00000557261 GPATCH8Q9UKJ3 1502 aaKnown RBP8.81□□□□□ -1
FOXN3-215ENST00000557261 ARID4AP29374 1257 aaPredicted RBP8.81□□□□□ -1
FOXN3-215ENST00000557261 TAGLNQ01995 201 aaKnown RBP8.81□□□□□ -1
FOXN3-215ENST00000557261 PTK7Q13308 1070 aa8.81□□□□□ -1
FOXN3-215ENST00000557261 PNMA1Q8ND90 353 aa8.81□□□□□ -1
FOXN3-215ENST00000557261 ARHGEF5Q12774 1597 aa8.81□□□□□ -1
FOXN3-215ENST00000557261 ABCA9Q8IUA7 1624 aa8.8□□□□□ -1
FOXN3-215ENST00000557261 ZBBXA8MT70 800 aa8.8□□□□□ -1
FOXN3-215ENST00000557261 ATP6V1AP38606 617 aa8.8□□□□□ -1
FOXN3-215ENST00000557261 LYPD8Q6UX82 237 aa8.8□□□□□ -1
FOXN3-215ENST00000557261 PLEKHM2Q8IWE5 1019 aa8.8□□□□□ -1
FOXN3-215ENST00000557261 NFATC2IPQ8NCF5 419 aa8.8□□□□□ -1
FOXN3-215ENST00000557261 GIPC2Q8TF65 315 aa8.8□□□□□ -1
FOXN3-215ENST00000557261 BCL2L13Q9BXK5 485 aa8.8□□□□□ -1
FOXN3-215ENST00000557261 MAP10Q9P2G4 905 aa8.8□□□□□ -1
FOXN3-215ENST00000557261 SLC27A5Q9Y2P5 690 aa8.8□□□□□ -1
FOXN3-215ENST00000557261 SHANK2Q9UPX8 1470 aa8.8□□□□□ -1
FOXN3-215ENST00000557261 WDR7Q9Y4E6 1490 aa8.8□□□□□ -1
FOXN3-215ENST00000557261 TTC37Q6PGP7 1564 aa8.8□□□□□ -1
FOXN3-215ENST00000557261 MAPKBP1O60336 1514 aa8.8□□□□□ -1
FOXN3-215ENST00000557261 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.8□□□□□ -1
FOXN3-215ENST00000557261 FAM196BA6NMK8 535 aa8.79□□□□□ -1
FOXN3-215ENST00000557261 RGS20O76081 388 aa8.79□□□□□ -1
FOXN3-215ENST00000557261 RASA1P20936 1047 aa8.79□□□□□ -1
FOXN3-215ENST00000557261 PPP4CP60510 307 aa8.79□□□□□ -1
FOXN3-215ENST00000557261 KCNC4Q03721 635 aa8.79□□□□□ -1
FOXN3-215ENST00000557261 NCOA4Q13772 614 aa8.79□□□□□ -1
FOXN3-215ENST00000557261 TSGA10IPQ3SY00 556 aa8.79□□□□□ -1
FOXN3-215ENST00000557261 RETREG3Q86VR2 466 aa8.79□□□□□ -1
FOXN3-215ENST00000557261 CAMSAP2Q08AD1 1489 aa8.78□□□□□ -1
FOXN3-215ENST00000557261 PLEKHD1A6NEE1 506 aa8.78□□□□□ -1
FOXN3-215ENST00000557261 RNF40O75150 1001 aa8.78□□□□□ -1
FOXN3-215ENST00000557261 ATP2B4P23634 1241 aa8.78□□□□□ -1
FOXN3-215ENST00000557261 MARSP56192 900 aaKnown RBP8.78□□□□□ -1
FOXN3-215ENST00000557261 MORN1Q5T089 497 aa8.78□□□□□ -1
FOXN3-215ENST00000557261 RNF19BQ6ZMZ0 732 aa8.78□□□□□ -1
FOXN3-215ENST00000557261 CLP1Q92989 425 aaKnown RBP8.78□□□□□ -1
FOXN3-215ENST00000557261 FKBPLQ9UIM3 349 aa8.78□□□□□ -1
FOXN3-215ENST00000557261 HFM1A2PYH4 1435 aa8.78□□□□□ -1
FOXN3-215ENST00000557261 CFAP74Q9C0B2 1584 aa8.78□□□□□ -1
FOXN3-215ENST00000557261 KIF13AQ9H1H9 1805 aa8.77□□□□□ -1
FOXN3-215ENST00000557261 PLEKHH2Q8IVE3 1493 aa8.77□□□□□ -1
FOXN3-215ENST00000557261 LGR5O75473 907 aa8.77□□□□□ -1.01
FOXN3-215ENST00000557261 GRIPAP1Q4V328 841 aa8.77□□□□□ -1.01
FOXN3-215ENST00000557261 BLOC1S3Q6QNY0 202 aa8.77□□□□□ -1.01
FOXN3-215ENST00000557261 NPAS4Q8IUM7 802 aa8.77□□□□□ -1.01
FOXN3-215ENST00000557261 FAM200AQ8TCP9 573 aa8.77□□□□□ -1.01
FOXN3-215ENST00000557261 OCSTAMPQ9BR26 566 aa8.77□□□□□ -1.01
FOXN3-215ENST00000557261 BIN2Q9UBW5 565 aaPredicted RBP8.77□□□□□ -1.01
FOXN3-215ENST00000557261 MAST1Q9Y2H9 1570 aa8.77□□□□□ -1.01
FOXN3-215ENST00000557261 TTBK1Q5TCY1 1321 aaPredicted RBP8.77□□□□□ -1.01
FOXN3-215ENST00000557261 ADGRL2O95490 1459 aa8.77□□□□□ -1.01
FOXN3-215ENST00000557261 ROCK1Q13464 1354 aa8.76□□□□□ -1.01
FOXN3-215ENST00000557261 ANKRD33BA6NCL7 494 aa8.76□□□□□ -1.01
FOXN3-215ENST00000557261 DPYDQ12882 1025 aa8.76□□□□□ -1.01
FOXN3-215ENST00000557261 LARP1Q6PKG0 1096 aaKnown RBP8.76□□□□□ -1.01
FOXN3-215ENST00000557261 ANKMY2Q8IV38 441 aa8.76□□□□□ -1.01
FOXN3-215ENST00000557261 ZNF594Q96JF6 807 aaPredicted RBP8.76□□□□□ -1.01
FOXN3-215ENST00000557261 ANO2Q9NQ90 1003 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms