RNA–Protein interactions for RNA: ENST00000557249.1

PTPN21-209, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 2

Gene PTPN21, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-209ENST00000557249 FOXD4L5Q5VV16 416 aaPredicted RBP5.05□□□□□ -1.6
PTPN21-209ENST00000557249 TRIM22Q8IYM9 498 aa5.05□□□□□ -1.6
PTPN21-209ENST00000557249 IGF1RP08069 1367 aa5.04□□□□□ -1.6
PTPN21-209ENST00000557249 CNTNAP5Q8WYK1 1306 aa5.04□□□□□ -1.6
PTPN21-209ENST00000557249 GPR25O00155 361 aa5.04□□□□□ -1.6
PTPN21-209ENST00000557249 MEN1O00255 615 aa5.04□□□□□ -1.6
PTPN21-209ENST00000557249 ADD1P35611 737 aaKnown RBP5.04□□□□□ -1.6
PTPN21-209ENST00000557249 GAS6Q14393 721 aa5.04□□□□□ -1.6
PTPN21-209ENST00000557249 PLA2G4EQ3MJ16 856 aa5.04□□□□□ -1.6
PTPN21-209ENST00000557249 DCAF5Q96JK2 942 aa5.04□□□□□ -1.6
PTPN21-209ENST00000557249 CYLDQ9NQC7 956 aa5.04□□□□□ -1.6
PTPN21-209ENST00000557249 CUEDC1Q9NWM3 386 aaPredicted RBP5.04□□□□□ -1.6
PTPN21-209ENST00000557249 ATP5J2-PTCD1G3V325 749 aa5.03□□□□□ -1.6
PTPN21-209ENST00000557249 LILRA1O75019 489 aa5.03□□□□□ -1.6
PTPN21-209ENST00000557249 RNF144AP50876 292 aaPredicted RBP5.03□□□□□ -1.6
PTPN21-209ENST00000557249 SKIV2LQ15477 1246 aaKnown RBP5.03□□□□□ -1.6
PTPN21-209ENST00000557249 SLC27A3Q5K4L6 730 aa5.03□□□□□ -1.6
PTPN21-209ENST00000557249 PPP2R2DQ66LE6 453 aa5.03□□□□□ -1.6
PTPN21-209ENST00000557249 SEPT12Q8IYM1 358 aa5.03□□□□□ -1.6
PTPN21-209ENST00000557249 ZNF837Q96EG3 531 aaPredicted RBP5.03□□□□□ -1.6
PTPN21-209ENST00000557249 GAS2L1Q99501 681 aaPredicted RBP5.03□□□□□ -1.6
PTPN21-209ENST00000557249 SPOCK3Q9BQ16 436 aa5.03□□□□□ -1.6
PTPN21-209ENST00000557249 SLC24A3Q9HC58 644 aa5.03□□□□□ -1.6
PTPN21-209ENST00000557249 ADAM23O75077 832 aa5.02□□□□□ -1.61
PTPN21-209ENST00000557249 MX2P20592 715 aa5.02□□□□□ -1.61
PTPN21-209ENST00000557249 GTPBP3Q969Y2 492 aaKnown RBP5.02□□□□□ -1.61
PTPN21-209ENST00000557249 NLRP3Q96P20 1036 aa5.02□□□□□ -1.61
PTPN21-209ENST00000557249 ESF1Q9H501 851 aaKnown RBP5.02□□□□□ -1.61
PTPN21-209ENST00000557249 GPC1P35052 558 aa5.01□□□□□ -1.61
PTPN21-209ENST00000557249 DBN1Q16643 649 aa5.01□□□□□ -1.61
PTPN21-209ENST00000557249 OCSTAMPQ9BR26 566 aa5.01□□□□□ -1.61
PTPN21-209ENST00000557249 DYRK1BQ9Y463 629 aa5.01□□□□□ -1.61
PTPN21-209ENST00000557249 ESPNB1AK53 854 aa5□□□□□ -1.61
PTPN21-209ENST00000557249 SH3D19Q5HYK7 790 aa5□□□□□ -1.61
PTPN21-209ENST00000557249 XP32Q5T750 250 aa5□□□□□ -1.61
PTPN21-209ENST00000557249 CCDC125Q86Z20 511 aa5□□□□□ -1.61
PTPN21-209ENST00000557249 KDF1Q8NAX2 398 aaPredicted RBP5□□□□□ -1.61
PTPN21-209ENST00000557249 LRRC4BQ9NT99 713 aa5□□□□□ -1.61
PTPN21-209ENST00000557249 K7ELQ4 463 aaPredicted RBP4.99□□□□□ -1.61
PTPN21-209ENST00000557249 POU4F2Q12837 409 aa4.99□□□□□ -1.61
PTPN21-209ENST00000557249 PROCA1Q8NCQ7 364 aaPredicted RBP4.99□□□□□ -1.61
PTPN21-209ENST00000557249 ACDQ96AP0 544 aa4.99□□□□□ -1.61
PTPN21-209ENST00000557249 DDRGK1Q96HY6 314 aa4.99□□□□□ -1.61
PTPN21-209ENST00000557249 PCDHB9Q9Y5E1 797 aa4.99□□□□□ -1.61
PTPN21-209ENST00000557249 A0A1W2PRU2 124 aa4.98□□□□□ -1.61
PTPN21-209ENST00000557249 USP17L8P0C7I0 530 aa4.98□□□□□ -1.61
PTPN21-209ENST00000557249 MAP2K3P46734 347 aa4.98□□□□□ -1.61
PTPN21-209ENST00000557249 RNF20Q5VTR2 975 aa4.98□□□□□ -1.61
PTPN21-209ENST00000557249 EPS8L1Q8TE68 723 aa4.98□□□□□ -1.61
PTPN21-209ENST00000557249 NUCKS1Q9H1E3 243 aaKnown RBP4.98□□□□□ -1.61
PTPN21-209ENST00000557249 RRAGCQ9HB90 399 aa4.98□□□□□ -1.61
PTPN21-209ENST00000557249 TIMMDC1Q9NPL8 285 aa4.98□□□□□ -1.61
PTPN21-209ENST00000557249 MKL2Q9ULH7 1088 aa4.98□□□□□ -1.61
PTPN21-209ENST00000557249 PHF24Q9UPV7 400 aa4.98□□□□□ -1.61
PTPN21-209ENST00000557249 OIP5O43482 229 aa4.97□□□□□ -1.61
PTPN21-209ENST00000557249 GTF2E1P29083 439 aaPredicted RBP4.97□□□□□ -1.61
PTPN21-209ENST00000557249 CC2D2BQ6DHV5 1058 aa4.97□□□□□ -1.61
PTPN21-209ENST00000557249 NBPF10Q6P3W6 841 aaKnown RBP4.97□□□□□ -1.61
PTPN21-209ENST00000557249 CYP2U1Q7Z449 544 aa4.97□□□□□ -1.61
PTPN21-209ENST00000557249 ALYREFQ86V81 257 aaKnown RBP4.97□□□□□ -1.61
PTPN21-209ENST00000557249 NBPF15Q8N660 670 aa4.97□□□□□ -1.61
PTPN21-209ENST00000557249 ZNF592Q92610 1267 aa4.97□□□□□ -1.61
PTPN21-209ENST00000557249 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.97□□□□□ -1.61
PTPN21-209ENST00000557249 OXCT2Q9BYC2 517 aaPredicted RBP4.97□□□□□ -1.61
PTPN21-209ENST00000557249 ZBBXA8MT70 800 aa4.96□□□□□ -1.62
PTPN21-209ENST00000557249 PIK3R2O00459 728 aa4.96□□□□□ -1.62
PTPN21-209ENST00000557249 GIGYF1O75420 1035 aaPredicted RBP4.96□□□□□ -1.62
PTPN21-209ENST00000557249 F11P03951 625 aa4.96□□□□□ -1.62
PTPN21-209ENST00000557249 PROCP04070 461 aa4.96□□□□□ -1.62
PTPN21-209ENST00000557249 WDR44Q5JSH3 913 aa4.96□□□□□ -1.62
PTPN21-209ENST00000557249 TAS1R3Q7RTX0 852 aa4.96□□□□□ -1.62
PTPN21-209ENST00000557249 HMX1Q9NP08 348 aaPredicted RBP4.96□□□□□ -1.62
PTPN21-209ENST00000557249 WASLO00401 505 aaPredicted RBP4.95□□□□□ -1.62
PTPN21-209ENST00000557249 AMPD1P23109 780 aa4.95□□□□□ -1.62
PTPN21-209ENST00000557249 BAG6P46379 1132 aa4.95□□□□□ -1.62
PTPN21-209ENST00000557249 CLN3Q13286 438 aa4.95□□□□□ -1.62
PTPN21-209ENST00000557249 CFHR5Q9BXR6 569 aa4.95□□□□□ -1.62
PTPN21-209ENST00000557249 GRIP2Q9C0E4 1043 aa4.95□□□□□ -1.62
PTPN21-209ENST00000557249 GDF2Q9UK05 429 aaPredicted RBP4.95□□□□□ -1.62
PTPN21-209ENST00000557249 ITGB2P05107 769 aa4.94□□□□□ -1.62
PTPN21-209ENST00000557249 CSB-PGBD3P0DP91 1061 aa4.94□□□□□ -1.62
PTPN21-209ENST00000557249 MCCD1P59942 119 aaPredicted RBP4.94□□□□□ -1.62
PTPN21-209ENST00000557249 ERVK-9P63128 1117 aa4.94□□□□□ -1.62
PTPN21-209ENST00000557249 FBXO31Q5XUX0 539 aaPredicted RBP4.94□□□□□ -1.62
PTPN21-209ENST00000557249 PGBD3Q8N328 593 aa4.94□□□□□ -1.62
PTPN21-209ENST00000557249 GPAMQ9HCL2 828 aa4.94□□□□□ -1.62
PTPN21-209ENST00000557249 ZNF330Q9Y3S2 320 aaPredicted RBP4.94□□□□□ -1.62
PTPN21-209ENST00000557249 SPATA31C2B4DYI2 1134 aa4.93□□□□□ -1.62
PTPN21-209ENST00000557249 RFC5P40937 340 aa4.93□□□□□ -1.62
PTPN21-209ENST00000557249 SNRPNP63162 240 aaKnown RBP4.93□□□□□ -1.62
PTPN21-209ENST00000557249 GRIN2CQ14957 1233 aa4.93□□□□□ -1.62
PTPN21-209ENST00000557249 EDARADDQ8WWZ3 215 aa4.93□□□□□ -1.62
PTPN21-209ENST00000557249 FAM117AQ9C073 453 aa4.93□□□□□ -1.62
PTPN21-209ENST00000557249 KDM4CQ9H3R0 1056 aa4.93□□□□□ -1.62
PTPN21-209ENST00000557249 ARHGEF10LQ9HCE6 1279 aa4.93□□□□□ -1.62
PTPN21-209ENST00000557249 PCDHB11Q9Y5F2 797 aa4.93□□□□□ -1.62
PTPN21-209ENST00000557249 KRBA1A5PL33 1030 aa4.92□□□□□ -1.62
PTPN21-209ENST00000557249 FURINP09958 794 aa4.92□□□□□ -1.62
PTPN21-209ENST00000557249 BMP4P12644 408 aa4.92□□□□□ -1.62
PTPN21-209ENST00000557249 TMEM259Q4ZIN3 620 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms