RNA–Protein interactions for RNA: ENST00000557240.5

PSMC6-214, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 5

Gene PSMC6, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-214ENST00000557240 ADH1CP00326 375 aa8.19□□□□□ -1.1
PSMC6-214ENST00000557240 NNTQ13423 1086 aa8.19□□□□□ -1.1
PSMC6-214ENST00000557240 C4orf48Q5BLP8 95 aa8.19□□□□□ -1.1
PSMC6-214ENST00000557240 TBC1D9Q6ZT07 1266 aa8.19□□□□□ -1.1
PSMC6-214ENST00000557240 ATP13A2Q9NQ11 1180 aa8.19□□□□□ -1.1
PSMC6-214ENST00000557240 GMPR2Q9P2T1 348 aaKnown RBP8.19□□□□□ -1.1
PSMC6-214ENST00000557240 FKBPLQ9UIM3 349 aa8.19□□□□□ -1.1
PSMC6-214ENST00000557240 IGSF3O75054 1194 aa8.18□□□□□ -1.1
PSMC6-214ENST00000557240 NR1H3Q13133 447 aa8.18□□□□□ -1.1
PSMC6-214ENST00000557240 CDCA8Q53HL2 280 aa8.18□□□□□ -1.1
PSMC6-214ENST00000557240 KANK4Q5T7N3 995 aaPredicted RBP8.18□□□□□ -1.1
PSMC6-214ENST00000557240 SH3BP5LQ7L8J4 393 aa8.18□□□□□ -1.1
PSMC6-214ENST00000557240 MPNDQ8N594 471 aa8.18□□□□□ -1.1
PSMC6-214ENST00000557240 CEP164Q9UPV0 1460 aa8.18□□□□□ -1.1
PSMC6-214ENST00000557240 C11orf95C9JLR9 678 aaPredicted RBP8.17□□□□□ -1.1
PSMC6-214ENST00000557240 CAPN5O15484 640 aaPredicted RBP8.17□□□□□ -1.1
PSMC6-214ENST00000557240 TXNDC2Q86VQ3 553 aa8.17□□□□□ -1.1
PSMC6-214ENST00000557240 RBM47A0AV96 593 aaKnown RBP8.16□□□□□ -1.1
PSMC6-214ENST00000557240 FSHRP23945 695 aa8.16□□□□□ -1.1
PSMC6-214ENST00000557240 TOP2BQ02880 1626 aa8.16□□□□□ -1.1
PSMC6-214ENST00000557240 SH3RF1Q7Z6J0 888 aa8.16□□□□□ -1.1
PSMC6-214ENST00000557240 ARHGAP9Q9BRR9 750 aa8.16□□□□□ -1.1
PSMC6-214ENST00000557240 ZC3H4Q9UPT8 1303 aaKnown RBP8.16□□□□□ -1.1
PSMC6-214ENST00000557240 LOC105371045A0A1W2PR82 267 aa8.15□□□□□ -1.1
PSMC6-214ENST00000557240 BMP1P13497 986 aa8.15□□□□□ -1.1
PSMC6-214ENST00000557240 WDR4P57081 412 aaKnown RBP8.15□□□□□ -1.1
PSMC6-214ENST00000557240 VASH1Q7L8A9 365 aaPredicted RBP8.15□□□□□ -1.1
PSMC6-214ENST00000557240 PLEKHM2Q8IWE5 1019 aa8.15□□□□□ -1.1
PSMC6-214ENST00000557240 ZNF592Q92610 1267 aa8.15□□□□□ -1.1
PSMC6-214ENST00000557240 SLC10A4Q96EP9 437 aa8.15□□□□□ -1.1
PSMC6-214ENST00000557240 CDK15Q96Q40 435 aa8.15□□□□□ -1.1
PSMC6-214ENST00000557240 C1QTNF2Q9BXJ5 285 aa8.15□□□□□ -1.1
PSMC6-214ENST00000557240 SENP2Q9HC62 589 aa8.15□□□□□ -1.1
PSMC6-214ENST00000557240 SYNJ1O43426 1573 aa8.14□□□□□ -1.11
PSMC6-214ENST00000557240 FAM196BA6NMK8 535 aa8.14□□□□□ -1.11
PSMC6-214ENST00000557240 ARID4AP29374 1257 aaPredicted RBP8.14□□□□□ -1.11
PSMC6-214ENST00000557240 NR5A1Q13285 461 aa8.14□□□□□ -1.11
PSMC6-214ENST00000557240 TMEM164Q5U3C3 297 aa8.14□□□□□ -1.11
PSMC6-214ENST00000557240 PDXDC2PQ6P474 469 aa8.14□□□□□ -1.11
PSMC6-214ENST00000557240 BIVM-ERCC5R4GMW8 1640 aa8.14□□□□□ -1.11
PSMC6-214ENST00000557240 CUX1P39880 1505 aa8.13□□□□□ -1.11
PSMC6-214ENST00000557240 ZBTB33Q86T24 672 aa8.13□□□□□ -1.11
PSMC6-214ENST00000557240 TRMT44Q8IYL2 757 aaKnown RBP8.13□□□□□ -1.11
PSMC6-214ENST00000557240 ZMIZ1Q9ULJ6 1067 aa8.13□□□□□ -1.11
PSMC6-214ENST00000557240 MAP4K5Q9Y4K4 846 aa8.13□□□□□ -1.11
PSMC6-214ENST00000557240 DNMBPQ6XZF7 1577 aa8.13□□□□□ -1.11
PSMC6-214ENST00000557240 ZBBXA8MT70 800 aa8.12□□□□□ -1.11
PSMC6-214ENST00000557240 LZTS3O60299 673 aaPredicted RBP8.12□□□□□ -1.11
PSMC6-214ENST00000557240 TIMP2P16035 220 aa8.12□□□□□ -1.11
PSMC6-214ENST00000557240 PTK2Q05397 1052 aa8.12□□□□□ -1.11
PSMC6-214ENST00000557240 ERFEQ4G0M1 354 aa8.12□□□□□ -1.11
PSMC6-214ENST00000557240 KIFC2Q96AC6 838 aa8.12□□□□□ -1.11
PSMC6-214ENST00000557240 TRIM47Q96LD4 638 aa8.12□□□□□ -1.11
PSMC6-214ENST00000557240 NOVA2Q9UNW9 492 aaKnown RBP8.12□□□□□ -1.11
PSMC6-214ENST00000557240 ERCC6Q03468 1493 aa8.12□□□□□ -1.11
PSMC6-214ENST00000557240 EEA1Q15075 1411 aa8.12□□□□□ -1.11
PSMC6-214ENST00000557240 USP17L3A6NCW0 530 aa8.11□□□□□ -1.11
PSMC6-214ENST00000557240 USP17L4A6NCW7 530 aa8.11□□□□□ -1.11
PSMC6-214ENST00000557240 ZIC2O95409 532 aaPredicted RBP8.11□□□□□ -1.11
PSMC6-214ENST00000557240 NR3C2P08235 984 aa8.11□□□□□ -1.11
PSMC6-214ENST00000557240 USP17L2Q6R6M4 530 aa8.11□□□□□ -1.11
PSMC6-214ENST00000557240 USP17L1Q7RTZ2 530 aa8.11□□□□□ -1.11
PSMC6-214ENST00000557240 ZNF775Q96BV0 537 aaPredicted RBP8.11□□□□□ -1.11
PSMC6-214ENST00000557240 TOPBP1Q92547 1522 aa8.11□□□□□ -1.11
PSMC6-214ENST00000557240 MRC2Q9UBG0 1479 aa8.11□□□□□ -1.11
PSMC6-214ENST00000557240 FBXO45P0C2W1 286 aa8.1□□□□□ -1.11
PSMC6-214ENST00000557240 SSFA2P28290 1259 aa8.1□□□□□ -1.11
PSMC6-214ENST00000557240 MCCD1P59942 119 aaPredicted RBP8.1□□□□□ -1.11
PSMC6-214ENST00000557240 STK32AQ8WU08 396 aa8.1□□□□□ -1.11
PSMC6-214ENST00000557240 GPSM3Q9Y4H4 160 aa8.1□□□□□ -1.11
PSMC6-214ENST00000557240 URB2Q14146 1524 aaKnown RBP8.09□□□□□ -1.11
PSMC6-214ENST00000557240 KIF21AQ7Z4S6 1674 aa8.09□□□□□ -1.11
PSMC6-214ENST00000557240 USP17L5A8MUK1 530 aa8.09□□□□□ -1.11
PSMC6-214ENST00000557240 SNRPBP14678 240 aaKnown RBP8.09□□□□□ -1.11
PSMC6-214ENST00000557240 GRM5P41594 1212 aa8.09□□□□□ -1.11
PSMC6-214ENST00000557240 PHLDB3Q6NSJ2 640 aa8.09□□□□□ -1.11
PSMC6-214ENST00000557240 TRIM46Q7Z4K8 759 aa8.09□□□□□ -1.11
PSMC6-214ENST00000557240 CLP1Q92989 425 aaKnown RBP8.09□□□□□ -1.11
PSMC6-214ENST00000557240 ITPKCQ96DU7 683 aa8.09□□□□□ -1.11
PSMC6-214ENST00000557240 ZFAND3Q9H8U3 227 aa8.09□□□□□ -1.11
PSMC6-214ENST00000557240 CDV3Q9UKY7 258 aaKnown RBP8.09□□□□□ -1.11
PSMC6-214ENST00000557240 ATP5J2-PTCD1G3V325 749 aa8.08□□□□□ -1.12
PSMC6-214ENST00000557240 PIK3CDO00329 1044 aa8.08□□□□□ -1.12
PSMC6-214ENST00000557240 SKIP12755 728 aa8.08□□□□□ -1.12
PSMC6-214ENST00000557240 SCARF1Q14162 830 aa8.08□□□□□ -1.12
PSMC6-214ENST00000557240 MRPL14Q6P1L8 145 aaKnown RBP8.08□□□□□ -1.12
PSMC6-214ENST00000557240 CCDC116Q8IYX3 515 aa8.08□□□□□ -1.12
PSMC6-214ENST00000557240 ADAM32Q8TC27 787 aa8.08□□□□□ -1.12
PSMC6-214ENST00000557240 IGSF5Q9NSI5 407 aa8.08□□□□□ -1.12
PSMC6-214ENST00000557240 FGD5Q6ZNL6 1462 aa8.07□□□□□ -1.12
PSMC6-214ENST00000557240 USP17L15C9J2P7 530 aa8.07□□□□□ -1.12
PSMC6-214ENST00000557240 USP17L10C9JJH3 530 aa8.07□□□□□ -1.12
PSMC6-214ENST00000557240 USP17L13C9JLJ4 530 aa8.07□□□□□ -1.12
PSMC6-214ENST00000557240 USP17L12C9JPN9 530 aa8.07□□□□□ -1.12
PSMC6-214ENST00000557240 USP17L11C9JVI0 530 aa8.07□□□□□ -1.12
PSMC6-214ENST00000557240 USP17L21D6R901 530 aa8.07□□□□□ -1.12
PSMC6-214ENST00000557240 USP17L18D6R9N7 530 aa8.07□□□□□ -1.12
PSMC6-214ENST00000557240 USP17L22D6RA61 530 aa8.07□□□□□ -1.12
PSMC6-214ENST00000557240 USP17L17D6RBQ6 530 aa8.07□□□□□ -1.12
PSMC6-214ENST00000557240 USP17L19D6RCP7 530 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms