RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 WIPF1O43516 503 aa8.87□□□□□ -0.99
ATXN3-246ENST00000557030 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.87□□□□□ -0.99
ATXN3-246ENST00000557030 ALG2Q9H553 416 aa8.87□□□□□ -0.99
ATXN3-246ENST00000557030 ATP5J2-PTCD1G3V325 749 aa8.86□□□□□ -0.99
ATXN3-246ENST00000557030 VSIG8P0DPA2 414 aa8.85□□□□□ -0.99
ATXN3-246ENST00000557030 RNF144AP50876 292 aaPredicted RBP8.85□□□□□ -0.99
ATXN3-246ENST00000557030 FIGNL2A6NMB9 653 aa8.84□□□□□ -0.99
ATXN3-246ENST00000557030 UBTFP17480 764 aaKnown RBP8.84□□□□□ -0.99
ATXN3-246ENST00000557030 FNBP4Q8N3X1 1017 aaPredicted RBP8.84□□□□□ -0.99
ATXN3-246ENST00000557030 ERBB4Q15303 1308 aa8.83□□□□□ -1
ATXN3-246ENST00000557030 A0A1W2PRU2 124 aa8.83□□□□□ -1
ATXN3-246ENST00000557030 SLC35F4A4IF30 521 aa8.83□□□□□ -1
ATXN3-246ENST00000557030 PPFIA3O75145 1194 aa8.83□□□□□ -1
ATXN3-246ENST00000557030 GPC1P35052 558 aa8.83□□□□□ -1
ATXN3-246ENST00000557030 VEGFBP49765 207 aa8.83□□□□□ -1
ATXN3-246ENST00000557030 PTSQ03393 145 aa8.83□□□□□ -1
ATXN3-246ENST00000557030 CYP2U1Q7Z449 544 aa8.83□□□□□ -1
ATXN3-246ENST00000557030 SENP3-EIF4A1A0A087X0R7 540 aa8.82□□□□□ -1
ATXN3-246ENST00000557030 SEMA3FQ13275 785 aa8.82□□□□□ -1
ATXN3-246ENST00000557030 CLN3Q13286 438 aa8.82□□□□□ -1
ATXN3-246ENST00000557030 SLFNL1Q499Z3 407 aa8.82□□□□□ -1
ATXN3-246ENST00000557030 RNF135Q8IUD6 432 aa8.82□□□□□ -1
ATXN3-246ENST00000557030 ADAMTS19Q8TE59 1207 aa8.82□□□□□ -1
ATXN3-246ENST00000557030 SLC16A10Q8TF71 515 aa8.82□□□□□ -1
ATXN3-246ENST00000557030 POLMQ9NP87 494 aaPredicted RBP8.82□□□□□ -1
ATXN3-246ENST00000557030 HRH3Q9Y5N1 445 aa8.82□□□□□ -1
ATXN3-246ENST00000557030 RAD21O60216 631 aa8.81□□□□□ -1
ATXN3-246ENST00000557030 POM121CA8CG34 1229 aa8.8□□□□□ -1
ATXN3-246ENST00000557030 GNRH1P01148 92 aa8.8□□□□□ -1
ATXN3-246ENST00000557030 MAP7D1Q3KQU3 841 aa8.8□□□□□ -1
ATXN3-246ENST00000557030 IRF7Q92985 503 aa8.8□□□□□ -1
ATXN3-246ENST00000557030 GRIP2Q9C0E4 1043 aa8.8□□□□□ -1
ATXN3-246ENST00000557030 DOLKQ9UPQ8 538 aa8.8□□□□□ -1
ATXN3-246ENST00000557030 PIK3CDO00329 1044 aa8.79□□□□□ -1
ATXN3-246ENST00000557030 USP4Q13107 963 aa8.79□□□□□ -1
ATXN3-246ENST00000557030 PLPP7Q8NBV4 271 aa8.79□□□□□ -1
ATXN3-246ENST00000557030 CLUAP1Q96AJ1 413 aa8.79□□□□□ -1
ATXN3-246ENST00000557030 ARHGEF10LQ9HCE6 1279 aa8.79□□□□□ -1
ATXN3-246ENST00000557030 IL2RAP01589 272 aa8.78□□□□□ -1
ATXN3-246ENST00000557030 LYSMD3Q7Z3D4 306 aa8.78□□□□□ -1
ATXN3-246ENST00000557030 CCDC155Q8N6L0 562 aa8.78□□□□□ -1
ATXN3-246ENST00000557030 NFATC2IPQ8NCF5 419 aa8.78□□□□□ -1
ATXN3-246ENST00000557030 NANOS1Q8WY41 292 aaKnown RBP8.78□□□□□ -1
ATXN3-246ENST00000557030 XAGE2Q96GT9 111 aa8.78□□□□□ -1
ATXN3-246ENST00000557030 MYCP01106 439 aaPredicted RBP8.77□□□□□ -1.01
ATXN3-246ENST00000557030 LORP23490 312 aaPredicted RBP8.77□□□□□ -1.01
ATXN3-246ENST00000557030 GMPRP36959 345 aa8.77□□□□□ -1.01
ATXN3-246ENST00000557030 WWC1Q8IX03 1113 aa8.77□□□□□ -1.01
ATXN3-246ENST00000557030 ESYT1Q9BSJ8 1104 aa8.77□□□□□ -1.01
ATXN3-246ENST00000557030 A6NJR5 290 aa8.76□□□□□ -1.01
ATXN3-246ENST00000557030 SPATA31C2B4DYI2 1134 aa8.76□□□□□ -1.01
ATXN3-246ENST00000557030 MEN1O00255 615 aa8.76□□□□□ -1.01
ATXN3-246ENST00000557030 FHDC1Q9C0D6 1143 aaPredicted RBP8.76□□□□□ -1.01
ATXN3-246ENST00000557030 CNKSR1Q969H4 720 aa8.75□□□□□ -1.01
ATXN3-246ENST00000557030 SIRT1Q96EB6 747 aa8.75□□□□□ -1.01
ATXN3-246ENST00000557030 UCN2Q96RP3 112 aa8.75□□□□□ -1.01
ATXN3-246ENST00000557030 RAB6BQ9NRW1 208 aa8.75□□□□□ -1.01
ATXN3-246ENST00000557030 ITGA6P23229 1130 aa8.74□□□□□ -1.01
ATXN3-246ENST00000557030 SCNN1DP51172 638 aa8.74□□□□□ -1.01
ATXN3-246ENST00000557030 OXLD1Q5BKU9 147 aa8.74□□□□□ -1.01
ATXN3-246ENST00000557030 WDR44Q5JSH3 913 aa8.74□□□□□ -1.01
ATXN3-246ENST00000557030 PRICKLE2Q7Z3G6 844 aa8.74□□□□□ -1.01
ATXN3-246ENST00000557030 PROSER2Q86WR7 435 aaPredicted RBP8.74□□□□□ -1.01
ATXN3-246ENST00000557030 GPR161Q8N6U8 529 aaKnown RBP8.74□□□□□ -1.01
ATXN3-246ENST00000557030 ETNK1Q9HBU6 452 aa8.74□□□□□ -1.01
ATXN3-246ENST00000557030 WASLO00401 505 aaPredicted RBP8.73□□□□□ -1.01
ATXN3-246ENST00000557030 LZTS3O60299 673 aaPredicted RBP8.73□□□□□ -1.01
ATXN3-246ENST00000557030 STAU1O95793 577 aaKnown RBP8.73□□□□□ -1.01
ATXN3-246ENST00000557030 CENPCQ03188 943 aa8.73□□□□□ -1.01
ATXN3-246ENST00000557030 NLRP3Q96P20 1036 aa8.73□□□□□ -1.01
ATXN3-246ENST00000557030 PCDHGA11Q9Y5H2 935 aa8.73□□□□□ -1.01
ATXN3-246ENST00000557030 HDGFL1Q5TGJ6 251 aa8.72□□□□□ -1.01
ATXN3-246ENST00000557030 ESF1Q9H501 851 aaKnown RBP8.72□□□□□ -1.01
ATXN3-246ENST00000557030 RHOQP17081 205 aa8.71□□□□□ -1.02
ATXN3-246ENST00000557030 NBPF10Q6P3W6 841 aaKnown RBP8.71□□□□□ -1.02
ATXN3-246ENST00000557030 NBPF15Q8N660 670 aa8.71□□□□□ -1.02
ATXN3-246ENST00000557030 TMEM229AB2RXF0 380 aa8.7□□□□□ -1.02
ATXN3-246ENST00000557030 INHAP05111 366 aa8.7□□□□□ -1.02
ATXN3-246ENST00000557030 SKIP12755 728 aa8.7□□□□□ -1.02
ATXN3-246ENST00000557030 KRT76Q01546 638 aa8.7□□□□□ -1.02
ATXN3-246ENST00000557030 POU4F2Q12837 409 aa8.7□□□□□ -1.02
ATXN3-246ENST00000557030 ESCO1Q5FWF5 840 aa8.7□□□□□ -1.02
ATXN3-246ENST00000557030 CUEDC1Q9NWM3 386 aaPredicted RBP8.7□□□□□ -1.02
ATXN3-246ENST00000557030 DYRK1BQ9Y463 629 aa8.7□□□□□ -1.02
ATXN3-246ENST00000557030 NCOA4Q13772 614 aa8.69□□□□□ -1.02
ATXN3-246ENST00000557030 SLC27A3Q5K4L6 730 aa8.69□□□□□ -1.02
ATXN3-246ENST00000557030 PLEKHM2Q8IWE5 1019 aa8.69□□□□□ -1.02
ATXN3-246ENST00000557030 USP17L5A8MUK1 530 aa8.68□□□□□ -1.02
ATXN3-246ENST00000557030 GDF10P55107 478 aa8.68□□□□□ -1.02
ATXN3-246ENST00000557030 INSM1Q01101 510 aaPredicted RBP8.68□□□□□ -1.02
ATXN3-246ENST00000557030 EML3Q32P44 896 aa8.68□□□□□ -1.02
ATXN3-246ENST00000557030 TBC1D9Q6ZT07 1266 aa8.68□□□□□ -1.02
ATXN3-246ENST00000557030 ZNF295-AS1Q8N0V1 137 aa8.68□□□□□ -1.02
ATXN3-246ENST00000557030 SLC4A9Q96Q91 983 aa8.68□□□□□ -1.02
ATXN3-246ENST00000557030 ATP9BO43861 1147 aa8.67□□□□□ -1.02
ATXN3-246ENST00000557030 MTFR1Q15390 333 aa8.67□□□□□ -1.02
ATXN3-246ENST00000557030 TAS1R3Q7RTX0 852 aa8.67□□□□□ -1.02
ATXN3-246ENST00000557030 PPARGC1BQ86YN6 1023 aaKnown RBP8.67□□□□□ -1.02
ATXN3-246ENST00000557030 GLMNQ92990 594 aa8.67□□□□□ -1.02
ATXN3-246ENST00000557030 ZSCAN10Q96SZ4 725 aaPredicted RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms