RNA–Protein interactions for RNA: ENST00000556674.1

TGFB3-206, Transcript of transforming growth factor beta 3, humanhuman

TSL 3

Gene TGFB3, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-206ENST00000556674 NLRP2Q9NX02 1062 aa22.15■■□□□ 1.14
TGFB3-206ENST00000556674 CHD4Q14839 1912 aa22.15■■□□□ 1.14
TGFB3-206ENST00000556674 SMG6Q86US8 1419 aaKnown RBP22.14■■□□□ 1.14
TGFB3-206ENST00000556674 FLT4P35916 1363 aa22.13■■□□□ 1.13
TGFB3-206ENST00000556674 KNSTRNQ9Y448 316 aa22.13■■□□□ 1.13
TGFB3-206ENST00000556674 RRS1Q15050 365 aaKnown RBP22.12■■□□□ 1.13
TGFB3-206ENST00000556674 INSRP06213 1382 aa22.11■■□□□ 1.13
TGFB3-206ENST00000556674 EXOC5O00471 708 aa22.09■■□□□ 1.13
TGFB3-206ENST00000556674 FBLN1P23142 703 aa22.09■■□□□ 1.13
TGFB3-206ENST00000556674 ARXQ96QS3 562 aa22.09■■□□□ 1.13
TGFB3-206ENST00000556674 IL2RBP14784 551 aa22.08■■□□□ 1.13
TGFB3-206ENST00000556674 IFFO2Q5TF58 517 aa22.08■■□□□ 1.13
TGFB3-206ENST00000556674 TNS2Q63HR2 1409 aa22.07■■□□□ 1.12
TGFB3-206ENST00000556674 LTV1Q96GA3 475 aaPredicted RBP22.07■■□□□ 1.12
TGFB3-206ENST00000556674 MAP3K5Q99683 1374 aa22.05■■□□□ 1.12
TGFB3-206ENST00000556674 WASHC2AQ641Q2 1341 aa22.05■■□□□ 1.12
TGFB3-206ENST00000556674 MAP2P11137 1827 aaKnown RBP22.04■■□□□ 1.12
TGFB3-206ENST00000556674 PAPPAQ13219 1627 aa22.03■■□□□ 1.12
TGFB3-206ENST00000556674 HSP90AB2PQ58FF8 381 aa22.03■■□□□ 1.12
TGFB3-206ENST00000556674 MORC1Q86VD1 984 aa22.03■■□□□ 1.12
TGFB3-206ENST00000556674 EMILIN1Q9Y6C2 1016 aa22.03■■□□□ 1.12
TGFB3-206ENST00000556674 NHSQ6T4R5 1651 aa22.02■■□□□ 1.12
TGFB3-206ENST00000556674 GPR162Q16538 588 aa22.02■■□□□ 1.12
TGFB3-206ENST00000556674 POLKQ9UBT6 870 aa22.02■■□□□ 1.12
TGFB3-206ENST00000556674 PPM1GO15355 546 aaPredicted RBP22.01■■□□□ 1.11
TGFB3-206ENST00000556674 GIGYF1O75420 1035 aaPredicted RBP22.01■■□□□ 1.11
TGFB3-206ENST00000556674 AMER1Q5JTC6 1135 aaPredicted RBP22.01■■□□□ 1.11
TGFB3-206ENST00000556674 PER1O15534 1290 aaPredicted RBP22■■□□□ 1.11
TGFB3-206ENST00000556674 ACSBG1Q96GR2 724 aa22■■□□□ 1.11
TGFB3-206ENST00000556674 NPC1L1Q9UHC9 1359 aa21.99■■□□□ 1.11
TGFB3-206ENST00000556674 TNNT2P45379 298 aaPredicted RBP21.98■■□□□ 1.11
TGFB3-206ENST00000556674 ZNF827Q17R98 1081 aa21.98■■□□□ 1.11
TGFB3-206ENST00000556674 NBPF6Q5VWK0 638 aa21.98■■□□□ 1.11
TGFB3-206ENST00000556674 NBPF4Q96M43 638 aa21.98■■□□□ 1.11
TGFB3-206ENST00000556674 RAPGEF4Q8WZA2 1011 aa21.97■■□□□ 1.11
TGFB3-206ENST00000556674 RGPD2P0DJD1 1756 aa21.97■■□□□ 1.11
TGFB3-206ENST00000556674 KLHL34Q8N239 644 aa21.96■■□□□ 1.11
TGFB3-206ENST00000556674 NCAPD2Q15021 1401 aa21.95■■□□□ 1.1
TGFB3-206ENST00000556674 TATP17735 454 aaPredicted RBP21.94■■□□□ 1.1
TGFB3-206ENST00000556674 ZEB1P37275 1124 aaPredicted RBP21.94■■□□□ 1.1
TGFB3-206ENST00000556674 PELP1Q8IZL8 1130 aaKnown RBP21.94■■□□□ 1.1
TGFB3-206ENST00000556674 LRRC4BQ9NT99 713 aa21.94■■□□□ 1.1
TGFB3-206ENST00000556674 PLEKHG2Q9H7P9 1386 aa21.94■■□□□ 1.1
TGFB3-206ENST00000556674 BTAF1O14981 1849 aa21.94■■□□□ 1.1
TGFB3-206ENST00000556674 ZCRB1Q8TBF4 217 aaKnown RBP21.93■■□□□ 1.1
TGFB3-206ENST00000556674 SHANK3Q9BYB0 1731 aa21.93■■□□□ 1.1
TGFB3-206ENST00000556674 MEGF6O75095 1541 aa21.92■■□□□ 1.1
TGFB3-206ENST00000556674 USHBP1Q8N6Y0 703 aa21.9■■□□□ 1.1
TGFB3-206ENST00000556674 AKT1S1Q96B36 256 aa21.9■■□□□ 1.1
TGFB3-206ENST00000556674 POLD1P28340 1107 aa21.89■■□□□ 1.09
TGFB3-206ENST00000556674 EIF4A2Q14240 407 aaKnown RBP21.89■■□□□ 1.09
TGFB3-206ENST00000556674 SLC16A10Q8TF71 515 aa21.89■■□□□ 1.09
TGFB3-206ENST00000556674 EYA1Q99502 592 aa21.89■■□□□ 1.09
TGFB3-206ENST00000556674 COL24A1Q17RW2 1714 aa21.89■■□□□ 1.09
TGFB3-206ENST00000556674 PCDH11XQ9BZA7 1347 aa21.88■■□□□ 1.09
TGFB3-206ENST00000556674 PCDH11YQ9BZA8 1340 aa21.88■■□□□ 1.09
TGFB3-206ENST00000556674 CC2D1BQ5T0F9 858 aaKnown RBP21.88■■□□□ 1.09
TGFB3-206ENST00000556674 NLGN2Q8NFZ4 835 aa21.88■■□□□ 1.09
TGFB3-206ENST00000556674 DDX54Q8TDD1 881 aaKnown RBP21.88■■□□□ 1.09
TGFB3-206ENST00000556674 QSER1Q2KHR3 1735 aa21.87■■□□□ 1.09
TGFB3-206ENST00000556674 PNPLA7Q6ZV29 1317 aa21.86■■□□□ 1.09
TGFB3-206ENST00000556674 IGSF1Q8N6C5 1336 aa21.86■■□□□ 1.09
TGFB3-206ENST00000556674 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.86■■□□□ 1.09
TGFB3-206ENST00000556674 SPG7Q9UQ90 795 aa21.85■■□□□ 1.09
TGFB3-206ENST00000556674 GOLGB1Q14789 3259 aaKnown RBP21.84■■□□□ 1.09
TGFB3-206ENST00000556674 CEP350Q5VT06 3117 aa21.84■■□□□ 1.09
TGFB3-206ENST00000556674 PKD1L3Q7Z443 1732 aa21.84■■□□□ 1.09
TGFB3-206ENST00000556674 MTHFSP49914 203 aa21.83■■□□□ 1.09
TGFB3-206ENST00000556674 YBX3P16989 372 aaKnown RBP eCLIP21.82■■□□□ 1.08
TGFB3-206ENST00000556674 SLC27A3Q5K4L6 730 aa21.82■■□□□ 1.08
TGFB3-206ENST00000556674 TFCP2L1Q9NZI6 479 aa21.82■■□□□ 1.08
TGFB3-206ENST00000556674 TUBGCP6Q96RT7 1819 aa21.82■■□□□ 1.08
TGFB3-206ENST00000556674 KCNQ4P56696 695 aa21.81■■□□□ 1.08
TGFB3-206ENST00000556674 KAT6BQ8WYB5 2073 aa21.81■■□□□ 1.08
TGFB3-206ENST00000556674 GRIN3BO60391 1043 aa21.79■■□□□ 1.08
TGFB3-206ENST00000556674 IL13P35225 146 aa21.79■■□□□ 1.08
TGFB3-206ENST00000556674 DOT1LQ8TEK3 1739 aa21.78■■□□□ 1.08
TGFB3-206ENST00000556674 ATP10DQ9P241 1426 aa21.78■■□□□ 1.08
TGFB3-206ENST00000556674 KDRP35968 1356 aa21.77■■□□□ 1.08
TGFB3-206ENST00000556674 AMOTQ4VCS5 1084 aa21.77■■□□□ 1.08
TGFB3-206ENST00000556674 DIAPH1O60610 1272 aaKnown RBP21.76■■□□□ 1.07
TGFB3-206ENST00000556674 CYP27B1O15528 508 aa21.75■■□□□ 1.07
TGFB3-206ENST00000556674 PRIM1P49642 420 aaKnown RBP21.75■■□□□ 1.07
TGFB3-206ENST00000556674 NKX1-1Q15270 411 aaPredicted RBP21.75■■□□□ 1.07
TGFB3-206ENST00000556674 IFNL2Q8IZJ0 200 aa21.75■■□□□ 1.07
TGFB3-206ENST00000556674 SYTL4Q96C24 671 aaPredicted RBP21.75■■□□□ 1.07
TGFB3-206ENST00000556674 CFAP53Q96M91 514 aa21.75■■□□□ 1.07
TGFB3-206ENST00000556674 HMGB2P26583 209 aaKnown RBP21.74■■□□□ 1.07
TGFB3-206ENST00000556674 PLEKHO1Q53GL0 409 aaPredicted RBP21.74■■□□□ 1.07
TGFB3-206ENST00000556674 CNGB1Q14028 1251 aaPredicted RBP21.73■■□□□ 1.07
TGFB3-206ENST00000556674 SULT6B1Q6IMI4 303 aa21.73■■□□□ 1.07
TGFB3-206ENST00000556674 LY75O60449 1722 aa21.72■■□□□ 1.07
TGFB3-206ENST00000556674 MSH5O43196 834 aa21.72■■□□□ 1.07
TGFB3-206ENST00000556674 HSP90AB1P08238 724 aaKnown RBP21.72■■□□□ 1.07
TGFB3-206ENST00000556674 GPBP1L1Q9HC44 474 aaPredicted RBP21.72■■□□□ 1.07
TGFB3-206ENST00000556674 PHKG2P15735 406 aa21.71■■□□□ 1.07
TGFB3-206ENST00000556674 COL23A1Q86Y22 540 aaPredicted RBP21.71■■□□□ 1.07
TGFB3-206ENST00000556674 HSPA6P17066 643 aa21.7■■□□□ 1.06
TGFB3-206ENST00000556674 COL3A1P02461 1466 aaPredicted RBP21.7■■□□□ 1.06
TGFB3-206ENST00000556674 CCNL1Q9UK58 526 aaPredicted RBP21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms