RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 PRR7Q8TB68 274 aa8.92□□□□□ -0.98
CPSF2-205ENST00000556622 KDM5BQ9UGL1 1544 aa8.91□□□□□ -0.98
CPSF2-205ENST00000556622 PROCA1Q8NCQ7 364 aaPredicted RBP8.91□□□□□ -0.98
CPSF2-205ENST00000556622 ZFAND3Q9H8U3 227 aa8.91□□□□□ -0.98
CPSF2-205ENST00000556622 FHOD3Q2V2M9 1422 aa8.9□□□□□ -0.98
CPSF2-205ENST00000556622 PLEKHD1A6NEE1 506 aa8.9□□□□□ -0.98
CPSF2-205ENST00000556622 CFAP99D6REC4 459 aa8.9□□□□□ -0.98
CPSF2-205ENST00000556622 DIEXFQ68CQ4 756 aaKnown RBP8.9□□□□□ -0.98
CPSF2-205ENST00000556622 LYPD8Q6UX82 237 aa8.9□□□□□ -0.98
CPSF2-205ENST00000556622 ZNF511Q8NB15 262 aa8.9□□□□□ -0.98
CPSF2-205ENST00000556622 CABLES1Q8TDN4 633 aa8.9□□□□□ -0.98
CPSF2-205ENST00000556622 KIF13AQ9H1H9 1805 aa8.89□□□□□ -0.99
CPSF2-205ENST00000556622 PTPRNQ16849 979 aa8.89□□□□□ -0.99
CPSF2-205ENST00000556622 RTL5Q5HYW3 569 aaPredicted RBP8.89□□□□□ -0.99
CPSF2-205ENST00000556622 GPAT2Q6NUI2 795 aa8.89□□□□□ -0.99
CPSF2-205ENST00000556622 CNTNAP3BQ96NU0 1288 aa8.89□□□□□ -0.99
CPSF2-205ENST00000556622 CNTNAP3Q9BZ76 1288 aa8.89□□□□□ -0.99
CPSF2-205ENST00000556622 ABCA8O94911 1581 aa8.89□□□□□ -0.99
CPSF2-205ENST00000556622 TSPOAP1O95153 1857 aa8.88□□□□□ -0.99
CPSF2-205ENST00000556622 SAMD9Q5K651 1589 aa8.88□□□□□ -0.99
CPSF2-205ENST00000556622 VARSP26640 1264 aaKnown RBP8.88□□□□□ -0.99
CPSF2-205ENST00000556622 FBXO31Q5XUX0 539 aaPredicted RBP8.88□□□□□ -0.99
CPSF2-205ENST00000556622 MPNDQ8N594 471 aa8.88□□□□□ -0.99
CPSF2-205ENST00000556622 EVA1BQ9NVM1 165 aa8.88□□□□□ -0.99
CPSF2-205ENST00000556622 ATP10BO94823 1461 aa8.88□□□□□ -0.99
CPSF2-205ENST00000556622 ZCCHC11Q5TAX3 1644 aaKnown RBP8.87□□□□□ -0.99
CPSF2-205ENST00000556622 ZIC2O95409 532 aaPredicted RBP8.87□□□□□ -0.99
CPSF2-205ENST00000556622 XP32Q5T750 250 aa8.87□□□□□ -0.99
CPSF2-205ENST00000556622 ITPKCQ96DU7 683 aa8.87□□□□□ -0.99
CPSF2-205ENST00000556622 DIP2BQ9P265 1576 aa8.86□□□□□ -0.99
CPSF2-205ENST00000556622 RNF225M0QZC1 329 aaPredicted RBP8.86□□□□□ -0.99
CPSF2-205ENST00000556622 PCMTD1Q96MG8 357 aaPredicted RBP8.86□□□□□ -0.99
CPSF2-205ENST00000556622 DNMT3LQ9UJW3 386 aa8.86□□□□□ -0.99
CPSF2-205ENST00000556622 EFCAB5A4FU69 1503 aa8.85□□□□□ -0.99
CPSF2-205ENST00000556622 EPRSP07814 1512 aaKnown RBP8.85□□□□□ -0.99
CPSF2-205ENST00000556622 NUTM2BA6NNL0 878 aaPredicted RBP8.85□□□□□ -0.99
CPSF2-205ENST00000556622 NUTM2EB1AL46 878 aaPredicted RBP8.85□□□□□ -0.99
CPSF2-205ENST00000556622 NR3C2P08235 984 aa8.85□□□□□ -0.99
CPSF2-205ENST00000556622 KCNH2Q12809 1159 aa8.85□□□□□ -0.99
CPSF2-205ENST00000556622 CSPP1Q1MSJ5 1256 aa8.85□□□□□ -0.99
CPSF2-205ENST00000556622 NUTM2DQ5VT03 806 aaPredicted RBP8.85□□□□□ -0.99
CPSF2-205ENST00000556622 ZNF385CQ66K41 422 aaPredicted RBP8.85□□□□□ -0.99
CPSF2-205ENST00000556622 NUTM2AQ8IVF1 878 aaPredicted RBP8.85□□□□□ -0.99
CPSF2-205ENST00000556622 CDK11AQ9UQ88 783 aaPredicted RBP8.85□□□□□ -0.99
CPSF2-205ENST00000556622 WDR7Q9Y4E6 1490 aa8.84□□□□□ -0.99
CPSF2-205ENST00000556622 RAPGEF6Q8TEU7 1601 aa8.84□□□□□ -0.99
CPSF2-205ENST00000556622 F12P00748 615 aaPredicted RBP8.84□□□□□ -0.99
CPSF2-205ENST00000556622 IRS1P35568 1242 aa8.84□□□□□ -0.99
CPSF2-205ENST00000556622 FMN1Q68DA7 1419 aa8.84□□□□□ -0.99
CPSF2-205ENST00000556622 ARHGAP35Q9NRY4 1499 aa8.83□□□□□ -1
CPSF2-205ENST00000556622 GLI2P10070 1586 aa8.83□□□□□ -1
CPSF2-205ENST00000556622 CD109Q6YHK3 1445 aa8.83□□□□□ -1
CPSF2-205ENST00000556622 WHAMMQ8TF30 809 aa8.83□□□□□ -1
CPSF2-205ENST00000556622 BMP2P12643 396 aa8.82□□□□□ -1
CPSF2-205ENST00000556622 RNFT1Q5M7Z0 435 aa8.82□□□□□ -1
CPSF2-205ENST00000556622 COL25A1Q9BXS0 654 aaPredicted RBP8.82□□□□□ -1
CPSF2-205ENST00000556622 DNMT3AQ9Y6K1 912 aaPredicted RBP8.82□□□□□ -1
CPSF2-205ENST00000556622 NUP153P49790 1475 aaKnown RBP8.82□□□□□ -1
CPSF2-205ENST00000556622 SOS2Q07890 1332 aaPredicted RBP8.81□□□□□ -1
CPSF2-205ENST00000556622 MAP3K1Q13233 1512 aa8.81□□□□□ -1
CPSF2-205ENST00000556622 PER1O15534 1290 aaPredicted RBP8.81□□□□□ -1
CPSF2-205ENST00000556622 ARID5BQ14865 1188 aa8.81□□□□□ -1
CPSF2-205ENST00000556622 LINC00528Q8N1L1 170 aa8.81□□□□□ -1
CPSF2-205ENST00000556622 HELBQ8NG08 1087 aaPredicted RBP8.81□□□□□ -1
CPSF2-205ENST00000556622 FOXJ1Q92949 421 aa8.81□□□□□ -1
CPSF2-205ENST00000556622 ACIN1Q9UKV3 1341 aaKnown RBP8.8□□□□□ -1
CPSF2-205ENST00000556622 RFC5P40937 340 aa8.8□□□□□ -1
CPSF2-205ENST00000556622 SVOPQ8N4V2 548 aa8.8□□□□□ -1
CPSF2-205ENST00000556622 CDK15Q96Q40 435 aa8.8□□□□□ -1
CPSF2-205ENST00000556622 TEX14Q8IWB6 1497 aa8.79□□□□□ -1
CPSF2-205ENST00000556622 CTDSPL2Q05D32 466 aa8.79□□□□□ -1
CPSF2-205ENST00000556622 TMEM259Q4ZIN3 620 aa8.79□□□□□ -1
CPSF2-205ENST00000556622 MEIOBQ8N635 442 aa8.79□□□□□ -1
CPSF2-205ENST00000556622 FAM174AQ8TBP5 190 aa8.79□□□□□ -1
CPSF2-205ENST00000556622 KDM6BO15054 1643 aa8.77□□□□□ -1.01
CPSF2-205ENST00000556622 SOCS7O14512 581 aa8.77□□□□□ -1.01
CPSF2-205ENST00000556622 ARHGEF15O94989 841 aa8.77□□□□□ -1.01
CPSF2-205ENST00000556622 IGHA1P01876 353 aa8.77□□□□□ -1.01
CPSF2-205ENST00000556622 GRM5P41594 1212 aa8.77□□□□□ -1.01
CPSF2-205ENST00000556622 TIMELESSQ9UNS1 1208 aa8.77□□□□□ -1.01
CPSF2-205ENST00000556622 MAP3K4Q9Y6R4 1608 aa8.76□□□□□ -1.01
CPSF2-205ENST00000556622 PTSQ03393 145 aa8.76□□□□□ -1.01
CPSF2-205ENST00000556622 BANK1Q8NDB2 785 aa8.76□□□□□ -1.01
CPSF2-205ENST00000556622 CFAP43Q8NDM7 1665 aa8.75□□□□□ -1.01
CPSF2-205ENST00000556622 CDK13Q14004 1512 aaKnown RBP8.75□□□□□ -1.01
CPSF2-205ENST00000556622 MAGI3Q5TCQ9 1506 aa8.75□□□□□ -1.01
CPSF2-205ENST00000556622 CASKIN1Q8WXD9 1431 aa8.75□□□□□ -1.01
CPSF2-205ENST00000556622 UPP2O95045 317 aa8.75□□□□□ -1.01
CPSF2-205ENST00000556622 C4orf48Q5BLP8 95 aa8.75□□□□□ -1.01
CPSF2-205ENST00000556622 PHLDB1Q86UU1 1377 aa8.74□□□□□ -1.01
CPSF2-205ENST00000556622 RRBP1Q9P2E9 1410 aaKnown RBP8.74□□□□□ -1.01
CPSF2-205ENST00000556622 HECW1Q76N89 1606 aa8.74□□□□□ -1.01
CPSF2-205ENST00000556622 RAPGEF3O95398 923 aa8.74□□□□□ -1.01
CPSF2-205ENST00000556622 NR5A1Q13285 461 aa8.74□□□□□ -1.01
CPSF2-205ENST00000556622 TMEM132AQ24JP5 1023 aa8.74□□□□□ -1.01
CPSF2-205ENST00000556622 EFCAB2Q5VUJ9 269 aa8.74□□□□□ -1.01
CPSF2-205ENST00000556622 COL17A1Q9UMD9 1497 aaPredicted RBP8.74□□□□□ -1.01
CPSF2-205ENST00000556622 PPRC1Q5VV67 1664 aaKnown RBP8.74□□□□□ -1.01
CPSF2-205ENST00000556622 SLURP2P0DP57 97 aa8.73□□□□□ -1.01
CPSF2-205ENST00000556622 CTHP32929 405 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms