RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 COL22A1Q8NFW1 1626 aaPredicted RBP14.06□□□□□ -0.16
LINC01550-206ENST00000556462 PHLPP1O60346 1717 aa14.06□□□□□ -0.16
LINC01550-206ENST00000556462 RTF1Q92541 710 aaKnown RBP14.06□□□□□ -0.16
LINC01550-206ENST00000556462 WDR17Q8IZU2 1322 aa14.05□□□□□ -0.16
LINC01550-206ENST00000556462 COL5A2P05997 1499 aaPredicted RBP14.05□□□□□ -0.16
LINC01550-206ENST00000556462 AMOTQ4VCS5 1084 aa14.05□□□□□ -0.16
LINC01550-206ENST00000556462 PLEKHO1Q53GL0 409 aaPredicted RBP14.05□□□□□ -0.16
LINC01550-206ENST00000556462 IL17REQ8NFR9 667 aa14.05□□□□□ -0.16
LINC01550-206ENST00000556462 MBIPQ9NS73 344 aa14.05□□□□□ -0.16
LINC01550-206ENST00000556462 CRB1P82279 1406 aa14.05□□□□□ -0.16
LINC01550-206ENST00000556462 BCAR3O75815 825 aa14.05□□□□□ -0.16
LINC01550-206ENST00000556462 MAP3K5Q99683 1374 aa14.04□□□□□ -0.16
LINC01550-206ENST00000556462 CHL1O00533 1208 aa14.04□□□□□ -0.16
LINC01550-206ENST00000556462 PLIN1O60240 522 aa14.04□□□□□ -0.16
LINC01550-206ENST00000556462 CT47B1P0C2W7 299 aaPredicted RBP14.04□□□□□ -0.16
LINC01550-206ENST00000556462 RARSP54136 660 aaKnown RBP14.04□□□□□ -0.16
LINC01550-206ENST00000556462 FAM208AQ9UK61 1670 aaKnown RBP14.04□□□□□ -0.16
LINC01550-206ENST00000556462 RAPGEF4Q8WZA2 1011 aa14.03□□□□□ -0.16
LINC01550-206ENST00000556462 ERICH6BQ5W0A0 696 aa14.03□□□□□ -0.16
LINC01550-206ENST00000556462 AKAP4Q5JQC9 854 aa14.02□□□□□ -0.16
LINC01550-206ENST00000556462 ZNF530Q6P9A1 599 aaPredicted RBP14.02□□□□□ -0.16
LINC01550-206ENST00000556462 TOM1L2Q6ZVM7 507 aa14.02□□□□□ -0.16
LINC01550-206ENST00000556462 BTG4Q9NY30 223 aa14.02□□□□□ -0.16
LINC01550-206ENST00000556462 LARP1Q6PKG0 1096 aaKnown RBP14.02□□□□□ -0.17
LINC01550-206ENST00000556462 CARD10Q9BWT7 1032 aa14.02□□□□□ -0.17
LINC01550-206ENST00000556462 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.02□□□□□ -0.17
LINC01550-206ENST00000556462 CEMIPQ8WUJ3 1361 aa14.01□□□□□ -0.17
LINC01550-206ENST00000556462 TATP17735 454 aaPredicted RBP14.01□□□□□ -0.17
LINC01550-206ENST00000556462 EVA1CP58658 441 aa14.01□□□□□ -0.17
LINC01550-206ENST00000556462 STRN4Q9NRL3 753 aa14.01□□□□□ -0.17
LINC01550-206ENST00000556462 MEGF6O75095 1541 aa14.01□□□□□ -0.17
LINC01550-206ENST00000556462 PLEKHG2Q9H7P9 1386 aa14□□□□□ -0.17
LINC01550-206ENST00000556462 TSPYL6Q8N831 410 aa14□□□□□ -0.17
LINC01550-206ENST00000556462 LGR6Q9HBX8 967 aa14□□□□□ -0.17
LINC01550-206ENST00000556462 MIS18AQ9NYP9 233 aa14□□□□□ -0.17
LINC01550-206ENST00000556462 VAMP4O75379 141 aa13.99□□□□□ -0.17
LINC01550-206ENST00000556462 C8orf58Q8NAV2 365 aa13.99□□□□□ -0.17
LINC01550-206ENST00000556462 ADAMTS2O95450 1211 aa13.99□□□□□ -0.17
LINC01550-206ENST00000556462 C1orf141Q5JVX7 400 aa13.99□□□□□ -0.17
LINC01550-206ENST00000556462 C20orf194Q5TEA3 1177 aa13.99□□□□□ -0.17
LINC01550-206ENST00000556462 MPRIPQ6WCQ1 1025 aa13.99□□□□□ -0.17
LINC01550-206ENST00000556462 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.99□□□□□ -0.17
LINC01550-206ENST00000556462 TAF7Q15545 349 aaPredicted RBP13.98□□□□□ -0.17
LINC01550-206ENST00000556462 SSH1Q8WYL5 1049 aa13.98□□□□□ -0.17
LINC01550-206ENST00000556462 BCL2L13Q9BXK5 485 aa13.98□□□□□ -0.17
LINC01550-206ENST00000556462 SPG7Q9UQ90 795 aa13.98□□□□□ -0.17
LINC01550-206ENST00000556462 COL14A1Q05707 1796 aaKnown RBP13.98□□□□□ -0.17
LINC01550-206ENST00000556462 LRRC37A3O60309 1634 aa13.98□□□□□ -0.17
LINC01550-206ENST00000556462 NUTM2BA6NNL0 878 aaPredicted RBP13.97□□□□□ -0.17
LINC01550-206ENST00000556462 NUTM2EB1AL46 878 aaPredicted RBP13.97□□□□□ -0.17
LINC01550-206ENST00000556462 ELL2O00472 640 aaPredicted RBP13.97□□□□□ -0.17
LINC01550-206ENST00000556462 RNMTO43148 476 aaKnown RBP13.97□□□□□ -0.17
LINC01550-206ENST00000556462 NUTM2AQ8IVF1 878 aaPredicted RBP13.97□□□□□ -0.17
LINC01550-206ENST00000556462 ZNF428Q96B54 188 aa13.97□□□□□ -0.17
LINC01550-206ENST00000556462 TSPYL4Q9UJ04 414 aa13.97□□□□□ -0.17
LINC01550-206ENST00000556462 PHKG2P15735 406 aa13.97□□□□□ -0.17
LINC01550-206ENST00000556462 KRT24Q2M2I5 525 aa13.97□□□□□ -0.17
LINC01550-206ENST00000556462 TWISTNBQ3B726 338 aaPredicted RBP13.97□□□□□ -0.17
LINC01550-206ENST00000556462 BABAM1Q9NWV8 329 aa13.97□□□□□ -0.17
LINC01550-206ENST00000556462 OVOS2A0A0G2JMS6 1433 aa13.96□□□□□ -0.17
LINC01550-206ENST00000556462 CYP27B1O15528 508 aa13.96□□□□□ -0.17
LINC01550-206ENST00000556462 JCADQ9P266 1359 aa13.96□□□□□ -0.17
LINC01550-206ENST00000556462 IL2RBP14784 551 aa13.95□□□□□ -0.18
LINC01550-206ENST00000556462 ALDH1L2Q3SY69 923 aa13.95□□□□□ -0.18
LINC01550-206ENST00000556462 EXOC6Q8TAG9 804 aa13.95□□□□□ -0.18
LINC01550-206ENST00000556462 IFNL2Q8IZJ0 200 aa13.95□□□□□ -0.18
LINC01550-206ENST00000556462 SMC4Q9NTJ3 1288 aa13.95□□□□□ -0.18
LINC01550-206ENST00000556462 PPP4R2Q9NY27 417 aa13.95□□□□□ -0.18
LINC01550-206ENST00000556462 BRPF1P55201 1214 aaPredicted RBP13.94□□□□□ -0.18
LINC01550-206ENST00000556462 FRAT1Q92837 279 aaPredicted RBP13.94□□□□□ -0.18
LINC01550-206ENST00000556462 USP35Q9P2H5 1018 aa13.94□□□□□ -0.18
LINC01550-206ENST00000556462 ZCRB1Q8TBF4 217 aaKnown RBP13.94□□□□□ -0.18
LINC01550-206ENST00000556462 TEFQ10587 303 aa13.93□□□□□ -0.18
LINC01550-206ENST00000556462 PDE3AQ14432 1141 aa13.93□□□□□ -0.18
LINC01550-206ENST00000556462 CRBNQ96SW2 442 aa13.93□□□□□ -0.18
LINC01550-206ENST00000556462 PKD1L3Q7Z443 1732 aa13.93□□□□□ -0.18
LINC01550-206ENST00000556462 ADAMTS7Q9UKP4 1686 aa13.92□□□□□ -0.18
LINC01550-206ENST00000556462 HSPA1LP34931 641 aa13.92□□□□□ -0.18
LINC01550-206ENST00000556462 KDM6AO15550 1401 aaPredicted RBP13.92□□□□□ -0.18
LINC01550-206ENST00000556462 SLIT2O94813 1529 aa13.91□□□□□ -0.18
LINC01550-206ENST00000556462 POTEDQ86YR6 584 aa13.91□□□□□ -0.18
LINC01550-206ENST00000556462 MRPL50Q8N5N7 158 aaKnown RBP13.91□□□□□ -0.18
LINC01550-206ENST00000556462 DCAF5Q96JK2 942 aa13.91□□□□□ -0.18
LINC01550-206ENST00000556462 TNNQ9UQP3 1299 aa13.91□□□□□ -0.18
LINC01550-206ENST00000556462 SPATA31A6Q5VVP1 1343 aa13.91□□□□□ -0.18
LINC01550-206ENST00000556462 BTBD11A6QL63 1104 aa13.91□□□□□ -0.18
LINC01550-206ENST00000556462 CANXP27824 592 aaKnown RBP13.91□□□□□ -0.18
LINC01550-206ENST00000556462 NOB1Q9ULX3 412 aaKnown RBP13.91□□□□□ -0.18
LINC01550-206ENST00000556462 PARP4Q9UKK3 1724 aaKnown RBP13.9□□□□□ -0.18
LINC01550-206ENST00000556462 PCDH11XQ9BZA7 1347 aa13.9□□□□□ -0.18
LINC01550-206ENST00000556462 PCDH11YQ9BZA8 1340 aa13.9□□□□□ -0.18
LINC01550-206ENST00000556462 TCERG1O14776 1098 aaKnown RBP13.9□□□□□ -0.18
LINC01550-206ENST00000556462 KCNQ3O43525 872 aa13.9□□□□□ -0.18
LINC01550-206ENST00000556462 HSP90AB1P08238 724 aaKnown RBP13.9□□□□□ -0.18
LINC01550-206ENST00000556462 ZKSCAN2Q63HK3 967 aa13.9□□□□□ -0.18
LINC01550-206ENST00000556462 PANK1Q8TE04 598 aa13.9□□□□□ -0.18
LINC01550-206ENST00000556462 SLC52A2Q9HAB3 445 aa13.9□□□□□ -0.18
LINC01550-206ENST00000556462 DISP2A7MBM2 1401 aa13.9□□□□□ -0.18
LINC01550-206ENST00000556462 PLCH1Q4KWH8 1693 aa13.9□□□□□ -0.18
LINC01550-206ENST00000556462 RLBP1P12271 317 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms