RNA–Protein interactions for RNA: ENST00000556342.1

SYNE2-221, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5

Gene SYNE2, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-221ENST00000556342 CSB-PGBD3P0DP91 1061 aa15.38■□□□□ 0.05
SYNE2-221ENST00000556342 SGIP1Q9BQI5 828 aa15.38■□□□□ 0.05
SYNE2-221ENST00000556342 TRPM1Q7Z4N2 1603 aa15.38■□□□□ 0.05
SYNE2-221ENST00000556342 TTC21AQ8NDW8 1320 aa15.38■□□□□ 0.05
SYNE2-221ENST00000556342 PDGFDQ9GZP0 370 aaPredicted RBP15.37■□□□□ 0.05
SYNE2-221ENST00000556342 WNK3Q9BYP7 1800 aa15.37■□□□□ 0.05
SYNE2-221ENST00000556342 CASZ1Q86V15 1759 aa15.36■□□□□ 0.05
SYNE2-221ENST00000556342 ROCK2O75116 1388 aaKnown RBP15.36■□□□□ 0.05
SYNE2-221ENST00000556342 NFAT5O94916 1531 aa15.35■□□□□ 0.05
SYNE2-221ENST00000556342 EXOC5O00471 708 aa15.35■□□□□ 0.05
SYNE2-221ENST00000556342 ZBTB7AO95365 584 aa15.35■□□□□ 0.05
SYNE2-221ENST00000556342 TXNRD1Q16881 649 aa15.35■□□□□ 0.05
SYNE2-221ENST00000556342 CCDC7Q96M83 1385 aa15.35■□□□□ 0.05
SYNE2-221ENST00000556342 PTGER2P43116 358 aa15.34■□□□□ 0.05
SYNE2-221ENST00000556342 STK32BQ9NY57 414 aa15.34■□□□□ 0.05
SYNE2-221ENST00000556342 TNS2Q63HR2 1409 aa15.34■□□□□ 0.05
SYNE2-221ENST00000556342 AKAP12Q02952 1782 aa15.33■□□□□ 0.04
SYNE2-221ENST00000556342 KTN1Q86UP2 1357 aaKnown RBP15.33■□□□□ 0.04
SYNE2-221ENST00000556342 ABCC6O95255 1503 aa15.33■□□□□ 0.04
SYNE2-221ENST00000556342 SLC15A2Q16348 729 aa15.32■□□□□ 0.04
SYNE2-221ENST00000556342 SIN3AQ96ST3 1273 aa15.31■□□□□ 0.04
SYNE2-221ENST00000556342 PCDHB13Q9Y5F0 798 aa15.31■□□□□ 0.04
SYNE2-221ENST00000556342 RGPD5Q99666 1765 aa15.31■□□□□ 0.04
SYNE2-221ENST00000556342 PYGBP11216 843 aa15.3■□□□□ 0.04
SYNE2-221ENST00000556342 ERBB3P21860 1342 aa15.3■□□□□ 0.04
SYNE2-221ENST00000556342 MYOM1P52179 1685 aa15.3■□□□□ 0.04
SYNE2-221ENST00000556342 USP31Q70CQ4 1352 aa15.3■□□□□ 0.04
SYNE2-221ENST00000556342 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.29■□□□□ 0.04
SYNE2-221ENST00000556342 SBNO2Q9Y2G9 1366 aa15.28■□□□□ 0.04
SYNE2-221ENST00000556342 NME9Q86XW9 330 aa15.28■□□□□ 0.04
SYNE2-221ENST00000556342 ACSBG1Q96GR2 724 aa15.28■□□□□ 0.04
SYNE2-221ENST00000556342 FHDC1Q9C0D6 1143 aaPredicted RBP15.28■□□□□ 0.04
SYNE2-221ENST00000556342 MTFR1LQ9H019 292 aa15.28■□□□□ 0.04
SYNE2-221ENST00000556342 NLRP2Q9NX02 1062 aa15.28■□□□□ 0.04
SYNE2-221ENST00000556342 MON2Q7Z3U7 1717 aa15.27■□□□□ 0.04
SYNE2-221ENST00000556342 UTRNP46939 3433 aa15.27■□□□□ 0.04
SYNE2-221ENST00000556342 CHRM1P11229 460 aaPredicted RBP15.27■□□□□ 0.04
SYNE2-221ENST00000556342 NEUROD1Q13562 356 aa15.27■□□□□ 0.04
SYNE2-221ENST00000556342 SYT17Q9BSW7 474 aa15.27■□□□□ 0.04
SYNE2-221ENST00000556342 NHSQ6T4R5 1651 aa15.27■□□□□ 0.03
SYNE2-221ENST00000556342 CD163L1Q9NR16 1453 aa15.27■□□□□ 0.03
SYNE2-221ENST00000556342 IL2RBP14784 551 aa15.26■□□□□ 0.03
SYNE2-221ENST00000556342 CIZ1Q9ULV3 898 aaPredicted RBP15.26■□□□□ 0.03
SYNE2-221ENST00000556342 ASTLQ6HA08 431 aaPredicted RBP15.25■□□□□ 0.03
SYNE2-221ENST00000556342 USP54Q70EL1 1684 aa15.25■□□□□ 0.03
SYNE2-221ENST00000556342 IFNL1Q8IU54 200 aa15.24■□□□□ 0.03
SYNE2-221ENST00000556342 ANKRD24Q8TF21 1146 aa15.24■□□□□ 0.03
SYNE2-221ENST00000556342 PAPPAQ13219 1627 aa15.24■□□□□ 0.03
SYNE2-221ENST00000556342 HDGFL2Q7Z4V5 671 aaPredicted RBP15.23■□□□□ 0.03
SYNE2-221ENST00000556342 ZNF784Q8NCA9 323 aaPredicted RBP15.23■□□□□ 0.03
SYNE2-221ENST00000556342 TMC1Q8TDI8 760 aa15.23■□□□□ 0.03
SYNE2-221ENST00000556342 TIE1P35590 1138 aa15.22■□□□□ 0.03
SYNE2-221ENST00000556342 ZNF827Q17R98 1081 aa15.22■□□□□ 0.03
SYNE2-221ENST00000556342 ARXQ96QS3 562 aa15.22■□□□□ 0.03
SYNE2-221ENST00000556342 CARD11Q9BXL7 1154 aa15.22■□□□□ 0.03
SYNE2-221ENST00000556342 SLC12A5Q9H2X9 1139 aa15.22■□□□□ 0.03
SYNE2-221ENST00000556342 EDC4Q6P2E9 1401 aaKnown RBP15.22■□□□□ 0.03
SYNE2-221ENST00000556342 ATMINO43313 823 aaPredicted RBP15.21■□□□□ 0.03
SYNE2-221ENST00000556342 LRRC4BQ9NT99 713 aa15.21■□□□□ 0.03
SYNE2-221ENST00000556342 TRPC6Q9Y210 931 aa15.21■□□□□ 0.03
SYNE2-221ENST00000556342 MAP3K5Q99683 1374 aa15.21■□□□□ 0.02
SYNE2-221ENST00000556342 A0A1W2PP64 1363 aa15.2■□□□□ 0.02
SYNE2-221ENST00000556342 BTAF1O14981 1849 aa15.2■□□□□ 0.02
SYNE2-221ENST00000556342 LTN1O94822 1766 aa15.19■□□□□ 0.02
SYNE2-221ENST00000556342 TERF2IPQ9NYB0 399 aa15.19■□□□□ 0.02
SYNE2-221ENST00000556342 IP6K1Q92551 441 aa15.18■□□□□ 0.02
SYNE2-221ENST00000556342 BMP2KQ9NSY1 1161 aaPredicted RBP15.18■□□□□ 0.02
SYNE2-221ENST00000556342 SLC27A3Q5K4L6 730 aa15.17■□□□□ 0.02
SYNE2-221ENST00000556342 DDX54Q8TDD1 881 aaKnown RBP15.17■□□□□ 0.02
SYNE2-221ENST00000556342 PUS7Q96PZ0 661 aaKnown RBP15.17■□□□□ 0.02
SYNE2-221ENST00000556342 SLC16A10Q8TF71 515 aa15.16■□□□□ 0.02
SYNE2-221ENST00000556342 LTV1Q96GA3 475 aaPredicted RBP15.16■□□□□ 0.02
SYNE2-221ENST00000556342 ZNF467Q7Z7K2 595 aaPredicted RBP15.15■□□□□ 0.02
SYNE2-221ENST00000556342 PNPLA7Q6ZV29 1317 aa15.15■□□□□ 0.02
SYNE2-221ENST00000556342 MAP3K19Q56UN5 1328 aa15.14■□□□□ 0.01
SYNE2-221ENST00000556342 ANKRD36BQ8N2N9 1353 aa15.13■□□□□ 0.01
SYNE2-221ENST00000556342 POLD1P28340 1107 aa15.13■□□□□ 0.01
SYNE2-221ENST00000556342 PRIM1P49642 420 aaKnown RBP15.13■□□□□ 0.01
SYNE2-221ENST00000556342 ATN1P54259 1190 aaPredicted RBP15.13■□□□□ 0.01
SYNE2-221ENST00000556342 GPR162Q16538 588 aa15.13■□□□□ 0.01
SYNE2-221ENST00000556342 PELP1Q8IZL8 1130 aaKnown RBP15.13■□□□□ 0.01
SYNE2-221ENST00000556342 SYTL4Q96C24 671 aaPredicted RBP15.13■□□□□ 0.01
SYNE2-221ENST00000556342 KAT6BQ8WYB5 2073 aa15.13■□□□□ 0.01
SYNE2-221ENST00000556342 GOLGB1Q14789 3259 aaKnown RBP15.12■□□□□ 0.01
SYNE2-221ENST00000556342 TTLL13PA6NNM8 815 aa15.12■□□□□ 0.01
SYNE2-221ENST00000556342 HOXC9P31274 260 aa15.12■□□□□ 0.01
SYNE2-221ENST00000556342 KCNQ4P56696 695 aa15.12■□□□□ 0.01
SYNE2-221ENST00000556342 COG3Q96JB2 828 aa15.12■□□□□ 0.01
SYNE2-221ENST00000556342 TFCP2L1Q9NZI6 479 aa15.12■□□□□ 0.01
SYNE2-221ENST00000556342 PCDHB8Q9UN66 801 aa15.12■□□□□ 0.01
SYNE2-221ENST00000556342 FAM208AQ9UK61 1670 aaKnown RBP15.12■□□□□ 0.01
SYNE2-221ENST00000556342 NSD2O96028 1365 aa15.11■□□□□ 0.01
SYNE2-221ENST00000556342 AMPHP49418 695 aa15.11■□□□□ 0.01
SYNE2-221ENST00000556342 C1QTNF8P60827 252 aa15.11■□□□□ 0.01
SYNE2-221ENST00000556342 CHD4Q14839 1912 aa15.11■□□□□ 0.01
SYNE2-221ENST00000556342 TONSLQ96HA7 1378 aa15.11■□□□□ 0.01
SYNE2-221ENST00000556342 QSER1Q2KHR3 1735 aa15.1■□□□□ 0.01
SYNE2-221ENST00000556342 SENP3-EIF4A1A0A087X0R7 540 aa15.1■□□□□ 0.01
SYNE2-221ENST00000556342 FBLN1P23142 703 aa15.1■□□□□ 0.01
SYNE2-221ENST00000556342 ZCRB1Q8TBF4 217 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms