RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 MEGF6O75095 1541 aa17.33■□□□□ 0.37
SNX6-207ENST00000556303 SPON1Q9HCB6 807 aa17.33■□□□□ 0.36
SNX6-207ENST00000556303 STK32BQ9NY57 414 aa17.33■□□□□ 0.36
SNX6-207ENST00000556303 HMGB2P26583 209 aaKnown RBP17.32■□□□□ 0.36
SNX6-207ENST00000556303 SLC15A2Q16348 729 aa17.32■□□□□ 0.36
SNX6-207ENST00000556303 SLC27A3Q5K4L6 730 aa17.32■□□□□ 0.36
SNX6-207ENST00000556303 ANO8Q9HCE9 1232 aaPredicted RBP17.32■□□□□ 0.36
SNX6-207ENST00000556303 POLKQ9UBT6 870 aa17.32■□□□□ 0.36
SNX6-207ENST00000556303 RGPD2P0DJD1 1756 aa17.31■□□□□ 0.36
SNX6-207ENST00000556303 MAP2P11137 1827 aaKnown RBP17.31■□□□□ 0.36
SNX6-207ENST00000556303 NCAPD2Q15021 1401 aa17.3■□□□□ 0.36
SNX6-207ENST00000556303 PCDH11XQ9BZA7 1347 aa17.3■□□□□ 0.36
SNX6-207ENST00000556303 PCDH11YQ9BZA8 1340 aa17.3■□□□□ 0.36
SNX6-207ENST00000556303 PPM1GO15355 546 aaPredicted RBP17.3■□□□□ 0.36
SNX6-207ENST00000556303 USHBP1Q8N6Y0 703 aa17.3■□□□□ 0.36
SNX6-207ENST00000556303 ANKRD26Q9UPS8 1709 aa17.3■□□□□ 0.36
SNX6-207ENST00000556303 PLEKHG2Q9H7P9 1386 aa17.29■□□□□ 0.36
SNX6-207ENST00000556303 BTAF1O14981 1849 aa17.29■□□□□ 0.36
SNX6-207ENST00000556303 PRIM1P49642 420 aaKnown RBP17.29■□□□□ 0.36
SNX6-207ENST00000556303 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.29■□□□□ 0.367e-15■□□□□ 9.4
SNX6-207ENST00000556303 KNSTRNQ9Y448 316 aa17.28■□□□□ 0.36
SNX6-207ENST00000556303 SYTL4Q96C24 671 aaPredicted RBP17.27■□□□□ 0.36
SNX6-207ENST00000556303 EYA1Q99502 592 aa17.26■□□□□ 0.35
SNX6-207ENST00000556303 SPG7Q9UQ90 795 aa17.26■□□□□ 0.35
SNX6-207ENST00000556303 SHANK3Q9BYB0 1731 aa17.26■□□□□ 0.35
SNX6-207ENST00000556303 NKX1-1Q15270 411 aaPredicted RBP17.25■□□□□ 0.35
SNX6-207ENST00000556303 MORC1Q86VD1 984 aa17.25■□□□□ 0.35
SNX6-207ENST00000556303 KIF7Q2M1P5 1343 aa17.24■□□□□ 0.35
SNX6-207ENST00000556303 TNNT2P45379 298 aaPredicted RBP17.24■□□□□ 0.35
SNX6-207ENST00000556303 LRRC4BQ9NT99 713 aa17.24■□□□□ 0.35
SNX6-207ENST00000556303 PPP1R1BQ9UD71 204 aaPredicted RBP17.24■□□□□ 0.35
SNX6-207ENST00000556303 CASZ1Q86V15 1759 aa17.23■□□□□ 0.35
SNX6-207ENST00000556303 CYP27B1O15528 508 aa17.23■□□□□ 0.35
SNX6-207ENST00000556303 EIF4A2Q14240 407 aaKnown RBP17.23■□□□□ 0.35
SNX6-207ENST00000556303 MTFR1LQ9H019 292 aa17.23■□□□□ 0.35
SNX6-207ENST00000556303 PAPPAQ13219 1627 aa17.22■□□□□ 0.35
SNX6-207ENST00000556303 AMER1Q5JTC6 1135 aaPredicted RBP17.22■□□□□ 0.35
SNX6-207ENST00000556303 AKT1S1Q96B36 256 aa17.22■□□□□ 0.35
SNX6-207ENST00000556303 SLC16A10Q8TF71 515 aa17.21■□□□□ 0.35
SNX6-207ENST00000556303 DOT1LQ8TEK3 1739 aa17.21■□□□□ 0.35
SNX6-207ENST00000556303 IGSF1Q8N6C5 1336 aa17.21■□□□□ 0.34
SNX6-207ENST00000556303 IFNL2Q8IZJ0 200 aa17.2■□□□□ 0.34
SNX6-207ENST00000556303 SMARCC1Q92922 1105 aaPredicted RBP17.2■□□□□ 0.34
SNX6-207ENST00000556303 PDGFDQ9GZP0 370 aaPredicted RBP17.2■□□□□ 0.34
SNX6-207ENST00000556303 PKD1L3Q7Z443 1732 aa17.2■□□□□ 0.34
SNX6-207ENST00000556303 PER1O15534 1290 aaPredicted RBP17.19■□□□□ 0.34
SNX6-207ENST00000556303 ZBTB7AO95365 584 aa17.19■□□□□ 0.34
SNX6-207ENST00000556303 ZNF827Q17R98 1081 aa17.19■□□□□ 0.34
SNX6-207ENST00000556303 CCNL1Q9UK58 526 aaPredicted RBP17.19■□□□□ 0.34
SNX6-207ENST00000556303 LY75O60449 1722 aa17.18■□□□□ 0.34
SNX6-207ENST00000556303 PTGER2P43116 358 aa17.18■□□□□ 0.34
SNX6-207ENST00000556303 AMOTQ4VCS5 1084 aa17.17■□□□□ 0.34
SNX6-207ENST00000556303 MPRIPQ6WCQ1 1025 aa17.17■□□□□ 0.34
SNX6-207ENST00000556303 TFCP2L1Q9NZI6 479 aa17.17■□□□□ 0.34
SNX6-207ENST00000556303 HSP90AB1P08238 724 aaKnown RBP17.16■□□□□ 0.34
SNX6-207ENST00000556303 PHKG2P15735 406 aa17.16■□□□□ 0.34
SNX6-207ENST00000556303 SGIP1Q9BQI5 828 aa17.16■□□□□ 0.34
SNX6-207ENST00000556303 ATF5Q9Y2D1 282 aaPredicted RBP17.16■□□□□ 0.34
SNX6-207ENST00000556303 QSER1Q2KHR3 1735 aa17.16■□□□□ 0.34
SNX6-207ENST00000556303 NPC1L1Q9UHC9 1359 aa17.15■□□□□ 0.34
SNX6-207ENST00000556303 DCAF8L1A6NGE4 600 aa17.15■□□□□ 0.34
SNX6-207ENST00000556303 MSH5O43196 834 aa17.15■□□□□ 0.34
SNX6-207ENST00000556303 PLEKHO1Q53GL0 409 aaPredicted RBP17.15■□□□□ 0.34
SNX6-207ENST00000556303 PIGBQ92521 554 aa17.14■□□□□ 0.33
SNX6-207ENST00000556303 PALLDQ8WX93 1383 aa17.14■□□□□ 0.33
SNX6-207ENST00000556303 ERVV-2B6SEH9 535 aa17.13■□□□□ 0.33
SNX6-207ENST00000556303 IL13P35225 146 aa17.13■□□□□ 0.33
SNX6-207ENST00000556303 PIAS4Q8N2W9 510 aaPredicted RBP17.13■□□□□ 0.33
SNX6-207ENST00000556303 FLAD1Q8NFF5 587 aa17.13■□□□□ 0.33
SNX6-207ENST00000556303 PNPLA7Q6ZV29 1317 aa17.13■□□□□ 0.33
SNX6-207ENST00000556303 UTRNP46939 3433 aa17.13■□□□□ 0.33
SNX6-207ENST00000556303 ADRA2BP18089 450 aa17.12■□□□□ 0.33
SNX6-207ENST00000556303 DCAF5Q96JK2 942 aa17.12■□□□□ 0.33
SNX6-207ENST00000556303 TMOD3Q9NYL9 352 aa17.12■□□□□ 0.33
SNX6-207ENST00000556303 KDRP35968 1356 aa17.12■□□□□ 0.33
SNX6-207ENST00000556303 POLD1P28340 1107 aa17.11■□□□□ 0.33
SNX6-207ENST00000556303 KCNQ4P56696 695 aa17.11■□□□□ 0.33
SNX6-207ENST00000556303 ARXQ96QS3 562 aa17.11■□□□□ 0.33
SNX6-207ENST00000556303 ITGB4P16144 1822 aa17.11■□□□□ 0.33
SNX6-207ENST00000556303 MTHFSP49914 203 aa17.1■□□□□ 0.33
SNX6-207ENST00000556303 MAP3K5Q99683 1374 aa17.1■□□□□ 0.33
SNX6-207ENST00000556303 SULT6B1Q6IMI4 303 aa17.09■□□□□ 0.33
SNX6-207ENST00000556303 SYT17Q9BSW7 474 aa17.09■□□□□ 0.33
SNX6-207ENST00000556303 TOGARAM1Q9Y4F4 1720 aa17.09■□□□□ 0.33
SNX6-207ENST00000556303 LOC102724428A0A0B4J2F2 783 aa17.08■□□□□ 0.32
SNX6-207ENST00000556303 SIK1P57059 783 aa17.08■□□□□ 0.32
SNX6-207ENST00000556303 C1orf141Q5JVX7 400 aa17.07■□□□□ 0.32
SNX6-207ENST00000556303 ZNF530Q6P9A1 599 aaPredicted RBP17.07■□□□□ 0.32
SNX6-207ENST00000556303 FHDC1Q9C0D6 1143 aaPredicted RBP17.07■□□□□ 0.32
SNX6-207ENST00000556303 CC2D1BQ5T0F9 858 aaKnown RBP17.06■□□□□ 0.32
SNX6-207ENST00000556303 COL23A1Q86Y22 540 aaPredicted RBP17.06■□□□□ 0.32
SNX6-207ENST00000556303 AEBP1Q8IUX7 1158 aa17.06■□□□□ 0.32
SNX6-207ENST00000556303 ASAP1Q9ULH1 1129 aa17.06■□□□□ 0.32
SNX6-207ENST00000556303 COL24A1Q17RW2 1714 aa17.06■□□□□ 0.32
SNX6-207ENST00000556303 C5P01031 1676 aa17.05■□□□□ 0.32
SNX6-207ENST00000556303 DIAPH1O60610 1272 aaKnown RBP17.05■□□□□ 0.32
SNX6-207ENST00000556303 AK7Q96M32 723 aa17.05■□□□□ 0.32
SNX6-207ENST00000556303 ATG3Q9NT62 314 aa17.05■□□□□ 0.32
SNX6-207ENST00000556303 TAF1LQ8IZX4 1826 aa17.05■□□□□ 0.32
SNX6-207ENST00000556303 GOLGB1Q14789 3259 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms