RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 RRS1Q15050 365 aaKnown RBP18.64■□□□□ 0.57
TGFB3-204ENST00000556285 DDX54Q8TDD1 881 aaKnown RBP18.64■□□□□ 0.57
TGFB3-204ENST00000556285 MTFR1LQ9H019 292 aa18.64■□□□□ 0.57
TGFB3-204ENST00000556285 AMPHP49418 695 aa18.63■□□□□ 0.57
TGFB3-204ENST00000556285 TOGARAM1Q9Y4F4 1720 aa18.63■□□□□ 0.57
TGFB3-204ENST00000556285 SLC24A1O60721 1099 aa18.62■□□□□ 0.57
TGFB3-204ENST00000556285 AKT1S1Q96B36 256 aa18.62■□□□□ 0.57
TGFB3-204ENST00000556285 TAF1LQ8IZX4 1826 aa18.61■□□□□ 0.57
TGFB3-204ENST00000556285 ITGB4P16144 1822 aa18.6■□□□□ 0.57
TGFB3-204ENST00000556285 PNPLA7Q6ZV29 1317 aa18.59■□□□□ 0.57
TGFB3-204ENST00000556285 NBPF6Q5VWK0 638 aa18.59■□□□□ 0.57
TGFB3-204ENST00000556285 USHBP1Q8N6Y0 703 aa18.59■□□□□ 0.57
TGFB3-204ENST00000556285 NBPF4Q96M43 638 aa18.59■□□□□ 0.57
TGFB3-204ENST00000556285 C5P01031 1676 aa18.58■□□□□ 0.57
TGFB3-204ENST00000556285 PRIM1P49642 420 aaKnown RBP18.58■□□□□ 0.56
TGFB3-204ENST00000556285 ARXQ96QS3 562 aa18.58■□□□□ 0.56
TGFB3-204ENST00000556285 CARD14Q9BXL6 1004 aa18.58■□□□□ 0.56
TGFB3-204ENST00000556285 RTL1A6NKG5 1358 aa18.56■□□□□ 0.56
TGFB3-204ENST00000556285 GOLGB1Q14789 3259 aaKnown RBP18.56■□□□□ 0.56
TGFB3-204ENST00000556285 ZNF784Q8NCA9 323 aaPredicted RBP18.56■□□□□ 0.56
TGFB3-204ENST00000556285 ZCRB1Q8TBF4 217 aaKnown RBP18.56■□□□□ 0.56
TGFB3-204ENST00000556285 HSP90AB2PQ58FF8 381 aa18.55■□□□□ 0.56
TGFB3-204ENST00000556285 SYTL4Q96C24 671 aaPredicted RBP18.55■□□□□ 0.56
TGFB3-204ENST00000556285 MAP3K5Q99683 1374 aa18.55■□□□□ 0.56
TGFB3-204ENST00000556285 PKD1L3Q7Z443 1732 aa18.54■□□□□ 0.56
TGFB3-204ENST00000556285 DCAF8L1A6NGE4 600 aa18.54■□□□□ 0.56
TGFB3-204ENST00000556285 PCGF6Q9BYE7 350 aa18.54■□□□□ 0.56
TGFB3-204ENST00000556285 ANKRD26Q9UPS8 1709 aa18.54■□□□□ 0.56
TGFB3-204ENST00000556285 NSD3Q9BZ95 1437 aa18.53■□□□□ 0.56
TGFB3-204ENST00000556285 MAP2P11137 1827 aaKnown RBP18.53■□□□□ 0.56
TGFB3-204ENST00000556285 CDCA8Q53HL2 280 aa18.52■□□□□ 0.56
TGFB3-204ENST00000556285 SLC27A3Q5K4L6 730 aa18.51■□□□□ 0.55
TGFB3-204ENST00000556285 NLGN2Q8NFZ4 835 aa18.51■□□□□ 0.55
TGFB3-204ENST00000556285 EMILIN1Q9Y6C2 1016 aa18.51■□□□□ 0.55
TGFB3-204ENST00000556285 INSRP06213 1382 aa18.51■□□□□ 0.55
TGFB3-204ENST00000556285 UBR3Q6ZT12 1888 aa18.5■□□□□ 0.55
TGFB3-204ENST00000556285 KLHL34Q8N239 644 aa18.49■□□□□ 0.55
TGFB3-204ENST00000556285 RAPGEF4Q8WZA2 1011 aa18.49■□□□□ 0.55
TGFB3-204ENST00000556285 FLT4P35916 1363 aa18.49■□□□□ 0.55
TGFB3-204ENST00000556285 SMG6Q86US8 1419 aaKnown RBP18.49■□□□□ 0.55
TGFB3-204ENST00000556285 TFCP2L1Q9NZI6 479 aa18.48■□□□□ 0.55
TGFB3-204ENST00000556285 TIMELESSQ9UNS1 1208 aa18.48■□□□□ 0.55
TGFB3-204ENST00000556285 C4BP0C0L5 1744 aa18.47■□□□□ 0.55
TGFB3-204ENST00000556285 TATP17735 454 aaPredicted RBP18.47■□□□□ 0.55
TGFB3-204ENST00000556285 COL23A1Q86Y22 540 aaPredicted RBP18.47■□□□□ 0.55
TGFB3-204ENST00000556285 CCNL1Q9UK58 526 aaPredicted RBP18.47■□□□□ 0.55
TGFB3-204ENST00000556285 AMIGO3Q86WK7 504 aa18.46■□□□□ 0.55
TGFB3-204ENST00000556285 SLC16A10Q8TF71 515 aa18.46■□□□□ 0.55
TGFB3-204ENST00000556285 CGNL1Q0VF96 1302 aa18.46■□□□□ 0.55
TGFB3-204ENST00000556285 KIF24Q5T7B8 1368 aa18.45■□□□□ 0.54
TGFB3-204ENST00000556285 PPM1GO15355 546 aaPredicted RBP18.45■□□□□ 0.54
TGFB3-204ENST00000556285 CYP27B1O15528 508 aa18.45■□□□□ 0.54
TGFB3-204ENST00000556285 SMIM5Q71RC9 77 aa18.45■□□□□ 0.54
TGFB3-204ENST00000556285 POLR3GLQ9BT43 218 aa18.45■□□□□ 0.54
TGFB3-204ENST00000556285 NCAPD2Q15021 1401 aa18.44■□□□□ 0.54
TGFB3-204ENST00000556285 MSL1Q68DK7 614 aa18.44■□□□□ 0.54
TGFB3-204ENST00000556285 GPR162Q16538 588 aa18.43■□□□□ 0.54
TGFB3-204ENST00000556285 PCDH11XQ9BZA7 1347 aa18.43■□□□□ 0.54
TGFB3-204ENST00000556285 PCDH11YQ9BZA8 1340 aa18.43■□□□□ 0.54
TGFB3-204ENST00000556285 CLSPNQ9HAW4 1339 aa18.43■□□□□ 0.54
TGFB3-204ENST00000556285 YBX3P16989 372 aaKnown RBP eCLIP18.42■□□□□ 0.54
TGFB3-204ENST00000556285 POLD1P28340 1107 aa18.41■□□□□ 0.54
TGFB3-204ENST00000556285 PELP1Q8IZL8 1130 aaKnown RBP18.41■□□□□ 0.54
TGFB3-204ENST00000556285 PALLDQ8WX93 1383 aa18.41■□□□□ 0.54
TGFB3-204ENST00000556285 MPRIPQ6WCQ1 1025 aa18.4■□□□□ 0.54
TGFB3-204ENST00000556285 EYA1Q99502 592 aa18.4■□□□□ 0.54
TGFB3-204ENST00000556285 POLKQ9UBT6 870 aa18.4■□□□□ 0.54
TGFB3-204ENST00000556285 WASHC2AQ641Q2 1341 aa18.4■□□□□ 0.54
TGFB3-204ENST00000556285 MSH5O43196 834 aa18.39■□□□□ 0.53
TGFB3-204ENST00000556285 HSPA5P11021 654 aaKnown RBP18.39■□□□□ 0.53
TGFB3-204ENST00000556285 TNNT2P45379 298 aaPredicted RBP18.39■□□□□ 0.53
TGFB3-204ENST00000556285 ADRA2BP18089 450 aa18.37■□□□□ 0.53
TGFB3-204ENST00000556285 KIAA1551Q9HCM1 1747 aa18.36■□□□□ 0.53
TGFB3-204ENST00000556285 C1QTNF8P60827 252 aa18.35■□□□□ 0.53
TGFB3-204ENST00000556285 EIF4G2P78344 907 aaKnown RBP eCLIP18.35■□□□□ 0.53
TGFB3-204ENST00000556285 PIGBQ92521 554 aa18.35■□□□□ 0.53
TGFB3-204ENST00000556285 EIF4A2Q14240 407 aaKnown RBP18.34■□□□□ 0.53
TGFB3-204ENST00000556285 NKX1-1Q15270 411 aaPredicted RBP18.34■□□□□ 0.53
TGFB3-204ENST00000556285 PANK3Q9H999 370 aa18.34■□□□□ 0.53
TGFB3-204ENST00000556285 SPG7Q9UQ90 795 aa18.34■□□□□ 0.53
TGFB3-204ENST00000556285 COL5A3P25940 1745 aaPredicted RBP18.33■□□□□ 0.52
TGFB3-204ENST00000556285 SENP3-EIF4A1A0A087X0R7 540 aa18.32■□□□□ 0.52
TGFB3-204ENST00000556285 LINC00116Q8NCU8 138 aa18.32■□□□□ 0.52
TGFB3-204ENST00000556285 CCER1Q8TC90 406 aaPredicted RBP18.32■□□□□ 0.52
TGFB3-204ENST00000556285 N4BP2Q86UW6 1770 aaPredicted RBP18.32■□□□□ 0.52
TGFB3-204ENST00000556285 WWC3Q9ULE0 1092 aa18.31■□□□□ 0.52
TGFB3-204ENST00000556285 KIF13BQ9NQT8 1826 aa18.3■□□□□ 0.52
TGFB3-204ENST00000556285 MYH14Q7Z406 1995 aaKnown RBP18.3■□□□□ 0.52
TGFB3-204ENST00000556285 PHF14O94880 888 aa18.3■□□□□ 0.52
TGFB3-204ENST00000556285 PHKG2P15735 406 aa18.3■□□□□ 0.52
TGFB3-204ENST00000556285 ITPK1Q13572 414 aa18.3■□□□□ 0.52
TGFB3-204ENST00000556285 SMARCC1Q92922 1105 aaPredicted RBP18.3■□□□□ 0.52
TGFB3-204ENST00000556285 ASAP1Q9ULH1 1129 aa18.3■□□□□ 0.52
TGFB3-204ENST00000556285 C4AP0C0L4 1744 aa18.29■□□□□ 0.52
TGFB3-204ENST00000556285 VIRMAQ69YN4 1812 aaKnown RBP18.29■□□□□ 0.52
TGFB3-204ENST00000556285 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.29■□□□□ 0.52
TGFB3-204ENST00000556285 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.27■□□□□ 0.52
TGFB3-204ENST00000556285 LOC102724428A0A0B4J2F2 783 aa18.27■□□□□ 0.52
TGFB3-204ENST00000556285 SIK1P57059 783 aa18.27■□□□□ 0.52
TGFB3-204ENST00000556285 IFNL2Q8IZJ0 200 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms