RNA–Protein interactions for RNA: ENST00000556284.1

MTHFD1-213, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-213ENST00000556284 FAM212AQ96EL1 285 aa13.37□□□□□ -0.27
MTHFD1-213ENST00000556284 EYA1Q99502 592 aa13.37□□□□□ -0.27
MTHFD1-213ENST00000556284 PNNQ9H307 717 aaKnown RBP13.37□□□□□ -0.27
MTHFD1-213ENST00000556284 ADAMTS8Q9UP79 889 aa13.37□□□□□ -0.27
MTHFD1-213ENST00000556284 LMO7Q8WWI1 1683 aa13.37□□□□□ -0.27
MTHFD1-213ENST00000556284 IGSF1Q8N6C5 1336 aa13.37□□□□□ -0.27
MTHFD1-213ENST00000556284 COL5A2P05997 1499 aaPredicted RBP13.36□□□□□ -0.27
MTHFD1-213ENST00000556284 SLIT2O94813 1529 aa13.36□□□□□ -0.27
MTHFD1-213ENST00000556284 FCHSD2O94868 740 aa13.36□□□□□ -0.27
MTHFD1-213ENST00000556284 DCAF8Q5TAQ9 597 aa13.36□□□□□ -0.27
MTHFD1-213ENST00000556284 NBPF6Q5VWK0 638 aa13.36□□□□□ -0.27
MTHFD1-213ENST00000556284 UNC5CLQ8IV45 518 aa13.36□□□□□ -0.27
MTHFD1-213ENST00000556284 FAM9BQ8IZU0 186 aa13.36□□□□□ -0.27
MTHFD1-213ENST00000556284 NBPF4Q96M43 638 aa13.36□□□□□ -0.27
MTHFD1-213ENST00000556284 STRN4Q9NRL3 753 aa13.36□□□□□ -0.27
MTHFD1-213ENST00000556284 NLRP2Q9NX02 1062 aa13.36□□□□□ -0.27
MTHFD1-213ENST00000556284 ECM2O94769 699 aaPredicted RBP13.35□□□□□ -0.27
MTHFD1-213ENST00000556284 SULT6B1Q6IMI4 303 aa13.35□□□□□ -0.27
MTHFD1-213ENST00000556284 LARP1Q6PKG0 1096 aaKnown RBP13.35□□□□□ -0.27
MTHFD1-213ENST00000556284 TOM1L2Q6ZVM7 507 aa13.35□□□□□ -0.27
MTHFD1-213ENST00000556284 RASEFQ8IZ41 740 aa13.35□□□□□ -0.27
MTHFD1-213ENST00000556284 CARD10Q9BWT7 1032 aa13.35□□□□□ -0.27
MTHFD1-213ENST00000556284 ILDR1Q86SU0 546 aaPredicted RBP13.34□□□□□ -0.27
MTHFD1-213ENST00000556284 USP21Q9UK80 565 aa13.34□□□□□ -0.27
MTHFD1-213ENST00000556284 HMOX1P09601 288 aa13.33□□□□□ -0.28
MTHFD1-213ENST00000556284 RSPH6AQ9H0K4 717 aa13.33□□□□□ -0.28
MTHFD1-213ENST00000556284 BCL9LQ86UU0 1499 aa13.33□□□□□ -0.28
MTHFD1-213ENST00000556284 AFF2P51816 1311 aa13.33□□□□□ -0.28
MTHFD1-213ENST00000556284 KDRP35968 1356 aa13.32□□□□□ -0.28
MTHFD1-213ENST00000556284 CRB1P82279 1406 aa13.32□□□□□ -0.28
MTHFD1-213ENST00000556284 VPS72Q15906 364 aa13.32□□□□□ -0.28
MTHFD1-213ENST00000556284 NCAPD2Q15021 1401 aa13.31□□□□□ -0.28
MTHFD1-213ENST00000556284 NWD2Q9ULI1 1742 aa13.31□□□□□ -0.28
MTHFD1-213ENST00000556284 NEFMP07197 916 aa13.31□□□□□ -0.28
MTHFD1-213ENST00000556284 AEBP1Q8IUX7 1158 aa13.31□□□□□ -0.28
MTHFD1-213ENST00000556284 USHBP1Q8N6Y0 703 aa13.31□□□□□ -0.28
MTHFD1-213ENST00000556284 RUNDC1Q96C34 613 aa13.31□□□□□ -0.28
MTHFD1-213ENST00000556284 THRAP3Q9Y2W1 955 aaKnown RBP13.31□□□□□ -0.28
MTHFD1-213ENST00000556284 RGPD5Q99666 1765 aa13.3□□□□□ -0.28
MTHFD1-213ENST00000556284 PRKAR2BP31323 418 aa13.3□□□□□ -0.28
MTHFD1-213ENST00000556284 PLEKHF1Q96S99 279 aa13.3□□□□□ -0.28
MTHFD1-213ENST00000556284 TRPC5Q9UL62 973 aaPredicted RBP13.3□□□□□ -0.28
MTHFD1-213ENST00000556284 SPATA31A5Q5VU36 1347 aa13.3□□□□□ -0.28
MTHFD1-213ENST00000556284 SPATA31A7Q8IWB4 1347 aa13.3□□□□□ -0.28
MTHFD1-213ENST00000556284 RGPD1P0DJD0 1748 aa13.3□□□□□ -0.28
MTHFD1-213ENST00000556284 PLCH1Q4KWH8 1693 aa13.29□□□□□ -0.28
MTHFD1-213ENST00000556284 ZNF772Q68DY9 489 aaPredicted RBP13.29□□□□□ -0.28
MTHFD1-213ENST00000556284 TCP11L2Q8N4U5 519 aa13.29□□□□□ -0.28
MTHFD1-213ENST00000556284 RAPGEF4Q8WZA2 1011 aa13.29□□□□□ -0.28
MTHFD1-213ENST00000556284 CCDC9Q9Y3X0 531 aaKnown RBP13.29□□□□□ -0.28
MTHFD1-213ENST00000556284 SPATA31A1Q5TZJ5 1347 aa13.29□□□□□ -0.28
MTHFD1-213ENST00000556284 PLEKHG2Q9H7P9 1386 aa13.29□□□□□ -0.28
MTHFD1-213ENST00000556284 FAM208AQ9UK61 1670 aaKnown RBP13.28□□□□□ -0.28
MTHFD1-213ENST00000556284 IL2RBP14784 551 aa13.28□□□□□ -0.28
MTHFD1-213ENST00000556284 TATP17735 454 aaPredicted RBP13.28□□□□□ -0.28
MTHFD1-213ENST00000556284 CCDC146Q8IYE0 955 aa13.28□□□□□ -0.28
MTHFD1-213ENST00000556284 CDCA7Q9BWT1 371 aaPredicted RBP13.28□□□□□ -0.28
MTHFD1-213ENST00000556284 USP35Q9P2H5 1018 aa13.28□□□□□ -0.28
MTHFD1-213ENST00000556284 MAPK8IP3Q9UPT6 1336 aa13.28□□□□□ -0.28
MTHFD1-213ENST00000556284 AMOTQ4VCS5 1084 aa13.27□□□□□ -0.29
MTHFD1-213ENST00000556284 PLEKHO1Q53GL0 409 aaPredicted RBP13.27□□□□□ -0.29
MTHFD1-213ENST00000556284 BARGINQ6ZT62 677 aa13.27□□□□□ -0.29
MTHFD1-213ENST00000556284 PHACTR3Q96KR7 559 aa13.27□□□□□ -0.29
MTHFD1-213ENST00000556284 QTRT2Q9H974 415 aaKnown RBP13.27□□□□□ -0.29
MTHFD1-213ENST00000556284 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.27□□□□□ -0.29
MTHFD1-213ENST00000556284 NRAPQ86VF7 1730 aa13.27□□□□□ -0.29
MTHFD1-213ENST00000556284 ATRNO75882 1429 aa13.26□□□□□ -0.29
MTHFD1-213ENST00000556284 NGEFQ8N5V2 710 aa13.26□□□□□ -0.29
MTHFD1-213ENST00000556284 GJD4Q96KN9 370 aaPredicted RBP13.26□□□□□ -0.29
MTHFD1-213ENST00000556284 APAF1O14727 1248 aa13.25□□□□□ -0.29
MTHFD1-213ENST00000556284 GAS2L2Q8NHY3 880 aa13.25□□□□□ -0.29
MTHFD1-213ENST00000556284 SPG7Q9UQ90 795 aa13.25□□□□□ -0.29
MTHFD1-213ENST00000556284 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.25□□□□□ -0.29
MTHFD1-213ENST00000556284 TMPOP42166 694 aaKnown RBP13.24□□□□□ -0.29
MTHFD1-213ENST00000556284 NFE2L2Q16236 605 aa13.24□□□□□ -0.29
MTHFD1-213ENST00000556284 OVOS2A0A0G2JMS6 1433 aa13.23□□□□□ -0.29
MTHFD1-213ENST00000556284 RGPD2P0DJD1 1756 aa13.23□□□□□ -0.29
MTHFD1-213ENST00000556284 ONECUT3O60422 494 aaPredicted RBP13.23□□□□□ -0.29
MTHFD1-213ENST00000556284 MTHFSDQ2M296 383 aaKnown RBP13.23□□□□□ -0.29
MTHFD1-213ENST00000556284 ZCRB1Q8TBF4 217 aaKnown RBP13.23□□□□□ -0.29
MTHFD1-213ENST00000556284 TSPYL2Q9H2G4 693 aaPredicted RBP13.23□□□□□ -0.29
MTHFD1-213ENST00000556284 DISP2A7MBM2 1401 aa13.22□□□□□ -0.29
MTHFD1-213ENST00000556284 EXOC5O00471 708 aa13.22□□□□□ -0.29
MTHFD1-213ENST00000556284 MEGF6O75095 1541 aa13.22□□□□□ -0.29
MTHFD1-213ENST00000556284 RIPK4P57078 832 aa13.21□□□□□ -0.29
MTHFD1-213ENST00000556284 RBM6P78332 1123 aaKnown RBP13.21□□□□□ -0.29
MTHFD1-213ENST00000556284 HNRNPUQ00839 825 aaKnown RBP eCLIP13.21□□□□□ -0.29
MTHFD1-213ENST00000556284 LMOD3Q0VAK6 560 aa13.21□□□□□ -0.29
MTHFD1-213ENST00000556284 FAM98CQ17RN3 349 aaKnown RBP13.21□□□□□ -0.29
MTHFD1-213ENST00000556284 CCDC27Q2M243 656 aa13.21□□□□□ -0.29
MTHFD1-213ENST00000556284 ZNF530Q6P9A1 599 aaPredicted RBP13.21□□□□□ -0.29
MTHFD1-213ENST00000556284 RGS17Q9UGC6 210 aaPredicted RBP13.21□□□□□ -0.29
MTHFD1-213ENST00000556284 HTATSF1O43719 755 aaKnown RBP13.2□□□□□ -0.3
MTHFD1-213ENST00000556284 AKAP4Q5JQC9 854 aa13.2□□□□□ -0.3
MTHFD1-213ENST00000556284 C1orf141Q5JVX7 400 aa13.2□□□□□ -0.3
MTHFD1-213ENST00000556284 IFNL2Q8IZJ0 200 aa13.2□□□□□ -0.3
MTHFD1-213ENST00000556284 RRP7AQ9Y3A4 280 aaKnown RBP13.2□□□□□ -0.3
MTHFD1-213ENST00000556284 PCDH11XQ9BZA7 1347 aa13.19□□□□□ -0.3
MTHFD1-213ENST00000556284 PCDH11YQ9BZA8 1340 aa13.19□□□□□ -0.3
MTHFD1-213ENST00000556284 HSP90AB1P08238 724 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms