RNA–Protein interactions for RNA: ENST00000556230.1

RPS29-205, Transcript of ribosomal protein S29, humanhuman

TSL 1 (best)

Gene RPS29, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS29-205ENST00000556230 NPC1L1Q9UHC9 1359 aa10.59□□□□□ -0.71
RPS29-205ENST00000556230 NCAPD2Q15021 1401 aa10.58□□□□□ -0.72
RPS29-205ENST00000556230 DOT1LQ8TEK3 1739 aa10.58□□□□□ -0.72
RPS29-205ENST00000556230 TRIM37O94972 964 aa10.58□□□□□ -0.72
RPS29-205ENST00000556230 ZEB1P37275 1124 aaPredicted RBP10.58□□□□□ -0.72
RPS29-205ENST00000556230 PARD3Q8TEW0 1356 aa10.57□□□□□ -0.72
RPS29-205ENST00000556230 BTAF1O14981 1849 aa10.57□□□□□ -0.72
RPS29-205ENST00000556230 PER1O15534 1290 aaPredicted RBP10.57□□□□□ -0.72
RPS29-205ENST00000556230 NBPF6Q5VWK0 638 aa10.57□□□□□ -0.72
RPS29-205ENST00000556230 DEFB132Q7Z7B7 95 aa10.57□□□□□ -0.72
RPS29-205ENST00000556230 MARCH10Q8NA82 808 aaPredicted RBP10.57□□□□□ -0.72
RPS29-205ENST00000556230 RAPGEF4Q8WZA2 1011 aa10.57□□□□□ -0.72
RPS29-205ENST00000556230 NBPF4Q96M43 638 aa10.57□□□□□ -0.72
RPS29-205ENST00000556230 NUP188Q5SRE5 1749 aa10.57□□□□□ -0.72
RPS29-205ENST00000556230 TATP17735 454 aaPredicted RBP10.56□□□□□ -0.72
RPS29-205ENST00000556230 USHBP1Q8N6Y0 703 aa10.56□□□□□ -0.72
RPS29-205ENST00000556230 APBA3O96018 575 aa10.55□□□□□ -0.72
RPS29-205ENST00000556230 CC2D1BQ5T0F9 858 aaKnown RBP10.55□□□□□ -0.72
RPS29-205ENST00000556230 PLEKHG2Q9H7P9 1386 aa10.54□□□□□ -0.72
RPS29-205ENST00000556230 EIF4A2Q14240 407 aaKnown RBP10.54□□□□□ -0.72
RPS29-205ENST00000556230 ZCRB1Q8TBF4 217 aaKnown RBP10.54□□□□□ -0.72
RPS29-205ENST00000556230 EN1Q05925 392 aaPredicted RBP10.53□□□□□ -0.72
RPS29-205ENST00000556230 DDX54Q8TDD1 881 aaKnown RBP10.53□□□□□ -0.72
RPS29-205ENST00000556230 EYA1Q99502 592 aa10.53□□□□□ -0.72
RPS29-205ENST00000556230 BCL11BQ9C0K0 894 aaPredicted RBP10.53□□□□□ -0.72
RPS29-205ENST00000556230 ITGB4P16144 1822 aa10.53□□□□□ -0.72
RPS29-205ENST00000556230 IGSF1Q8N6C5 1336 aa10.53□□□□□ -0.72
RPS29-205ENST00000556230 PCDH11XQ9BZA7 1347 aa10.53□□□□□ -0.72
RPS29-205ENST00000556230 PCDH11YQ9BZA8 1340 aa10.53□□□□□ -0.72
RPS29-205ENST00000556230 TOGARAM1Q9Y4F4 1720 aa10.52□□□□□ -0.73
RPS29-205ENST00000556230 MTHFSP49914 203 aa10.51□□□□□ -0.73
RPS29-205ENST00000556230 CNGB1Q14028 1251 aaPredicted RBP10.51□□□□□ -0.73
RPS29-205ENST00000556230 CAMKK2Q96RR4 588 aa10.51□□□□□ -0.73
RPS29-205ENST00000556230 COL3A1P02461 1466 aaPredicted RBP10.5□□□□□ -0.73
RPS29-205ENST00000556230 VIRMAQ69YN4 1812 aaKnown RBP10.5□□□□□ -0.73
RPS29-205ENST00000556230 EZH2Q15910 746 aaKnown RBP10.5□□□□□ -0.73
RPS29-205ENST00000556230 ACSBG1Q96GR2 724 aa10.5□□□□□ -0.73
RPS29-205ENST00000556230 SPG7Q9UQ90 795 aa10.5□□□□□ -0.73
RPS29-205ENST00000556230 LY75O60449 1722 aa10.5□□□□□ -0.73
RPS29-205ENST00000556230 PLSCR1O15162 318 aa10.49□□□□□ -0.73
RPS29-205ENST00000556230 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.49□□□□□ -0.73
RPS29-205ENST00000556230 KDRP35968 1356 aa10.49□□□□□ -0.73
RPS29-205ENST00000556230 KCNQ2O43526 872 aa10.48□□□□□ -0.73
RPS29-205ENST00000556230 DIAPH1O60610 1272 aaKnown RBP10.48□□□□□ -0.73
RPS29-205ENST00000556230 IL13P35225 146 aa10.48□□□□□ -0.73
RPS29-205ENST00000556230 PTF1AQ7RTS3 328 aa10.48□□□□□ -0.73
RPS29-205ENST00000556230 CYP27B1O15528 508 aa10.47□□□□□ -0.73
RPS29-205ENST00000556230 SYTL4Q96C24 671 aaPredicted RBP10.47□□□□□ -0.73
RPS29-205ENST00000556230 CFAP53Q96M91 514 aa10.47□□□□□ -0.73
RPS29-205ENST00000556230 PAPPAQ13219 1627 aa10.47□□□□□ -0.73
RPS29-205ENST00000556230 SCN11AQ9UI33 1791 aa10.47□□□□□ -0.73
RPS29-205ENST00000556230 DSG3P32926 999 aa10.46□□□□□ -0.73
RPS29-205ENST00000556230 AMOTQ4VCS5 1084 aa10.46□□□□□ -0.73
RPS29-205ENST00000556230 PLEKHO1Q53GL0 409 aaPredicted RBP10.46□□□□□ -0.73
RPS29-205ENST00000556230 NBPF14Q5TI25 921 aa10.46□□□□□ -0.73
RPS29-205ENST00000556230 SULT6B1Q6IMI4 303 aa10.46□□□□□ -0.73
RPS29-205ENST00000556230 AEBP1Q8IUX7 1158 aa10.46□□□□□ -0.73
RPS29-205ENST00000556230 LRP5O75197 1615 aa10.46□□□□□ -0.74
RPS29-205ENST00000556230 PPP2R1AP30153 589 aa10.45□□□□□ -0.74
RPS29-205ENST00000556230 PRIM1P49642 420 aaKnown RBP10.45□□□□□ -0.74
RPS29-205ENST00000556230 IFNL2Q8IZJ0 200 aa10.45□□□□□ -0.74
RPS29-205ENST00000556230 TAF1LQ8IZX4 1826 aa10.44□□□□□ -0.74
RPS29-205ENST00000556230 QSER1Q2KHR3 1735 aa10.44□□□□□ -0.74
RPS29-205ENST00000556230 C5P01031 1676 aa10.44□□□□□ -0.74
RPS29-205ENST00000556230 PSDA5PKW4 1024 aaPredicted RBP10.44□□□□□ -0.74
RPS29-205ENST00000556230 PHKG2P15735 406 aa10.44□□□□□ -0.74
RPS29-205ENST00000556230 DDX10Q13206 875 aaKnown RBP10.44□□□□□ -0.74
RPS29-205ENST00000556230 NKX1-1Q15270 411 aaPredicted RBP10.44□□□□□ -0.74
RPS29-205ENST00000556230 TXNRD1Q16881 649 aa10.44□□□□□ -0.74
RPS29-205ENST00000556230 ZNF530Q6P9A1 599 aaPredicted RBP10.44□□□□□ -0.74
RPS29-205ENST00000556230 TUBGCP6Q96RT7 1819 aa10.43□□□□□ -0.74
RPS29-205ENST00000556230 U2SURPO15042 1029 aaKnown RBP10.43□□□□□ -0.74
RPS29-205ENST00000556230 HSP90AB1P08238 724 aaKnown RBP10.43□□□□□ -0.74
RPS29-205ENST00000556230 HMOX1P09601 288 aa10.43□□□□□ -0.74
RPS29-205ENST00000556230 R3HDM1Q15032 1099 aaKnown RBP10.43□□□□□ -0.74
RPS29-205ENST00000556230 C1orf141Q5JVX7 400 aa10.43□□□□□ -0.74
RPS29-205ENST00000556230 CASZ1Q86V15 1759 aa10.43□□□□□ -0.74
RPS29-205ENST00000556230 ADAMTS7Q9UKP4 1686 aa10.42□□□□□ -0.74
RPS29-205ENST00000556230 NUDCQ9Y266 331 aa10.42□□□□□ -0.74
RPS29-205ENST00000556230 KDM6AO15550 1401 aaPredicted RBP10.41□□□□□ -0.74
RPS29-205ENST00000556230 RALBP1Q15311 655 aa10.41□□□□□ -0.74
RPS29-205ENST00000556230 SLC27A3Q5K4L6 730 aa10.41□□□□□ -0.74
RPS29-205ENST00000556230 MPRIPQ6WCQ1 1025 aa10.41□□□□□ -0.74
RPS29-205ENST00000556230 PROM2Q8N271 834 aa10.41□□□□□ -0.74
RPS29-205ENST00000556230 DCAF5Q96JK2 942 aa10.41□□□□□ -0.74
RPS29-205ENST00000556230 ANO8Q9HCE9 1232 aaPredicted RBP10.41□□□□□ -0.74
RPS29-205ENST00000556230 STK32BQ9NY57 414 aa10.41□□□□□ -0.74
RPS29-205ENST00000556230 TMOD3Q9NYL9 352 aa10.41□□□□□ -0.74
RPS29-205ENST00000556230 ZNF831Q5JPB2 1677 aa10.41□□□□□ -0.74
RPS29-205ENST00000556230 PALLDQ8WX93 1383 aa10.4□□□□□ -0.74
RPS29-205ENST00000556230 SMARCC1Q92922 1105 aaPredicted RBP10.4□□□□□ -0.74
RPS29-205ENST00000556230 MRC1P22897 1456 aa10.39□□□□□ -0.75
RPS29-205ENST00000556230 ERVV-2B6SEH9 535 aa10.39□□□□□ -0.75
RPS29-205ENST00000556230 HMGB2P26583 209 aaKnown RBP10.39□□□□□ -0.75
RPS29-205ENST00000556230 CCNL1Q9UK58 526 aaPredicted RBP10.39□□□□□ -0.75
RPS29-205ENST00000556230 SIPA1L3O60292 1781 aaPredicted RBP10.39□□□□□ -0.75
RPS29-205ENST00000556230 C4BP0C0L5 1744 aa10.38□□□□□ -0.75
RPS29-205ENST00000556230 CICQ96RK0 1608 aaPredicted RBP10.38□□□□□ -0.75
RPS29-205ENST00000556230 U2AF1L5P0DN76 240 aaPredicted RBP10.38□□□□□ -0.75
RPS29-205ENST00000556230 U2AF1Q01081 240 aaKnown RBP eCLIP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms