RNA–Protein interactions for RNA: ENST00000556226.5

HNRNPC-224, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-224ENST00000556226 QSER1Q2KHR3 1735 aa13.66□□□□□ -0.22
HNRNPC-224ENST00000556226 NSD2O96028 1365 aa13.66□□□□□ -0.22
HNRNPC-224ENST00000556226 MEGF6O75095 1541 aa13.65□□□□□ -0.22
HNRNPC-224ENST00000556226 HOXC9P31274 260 aa13.65□□□□□ -0.22
HNRNPC-224ENST00000556226 ANKRD36BQ8N2N9 1353 aa13.65□□□□□ -0.22
HNRNPC-224ENST00000556226 MAP3K5Q99683 1374 aa13.65□□□□□ -0.22
HNRNPC-224ENST00000556226 COL24A1Q17RW2 1714 aa13.64□□□□□ -0.23
HNRNPC-224ENST00000556226 CCER1Q8TC90 406 aaPredicted RBP13.64□□□□□ -0.23
HNRNPC-224ENST00000556226 COG3Q96JB2 828 aa13.64□□□□□ -0.23
HNRNPC-224ENST00000556226 LY75O60449 1722 aa13.64□□□□□ -0.23
HNRNPC-224ENST00000556226 PNPLA7Q6ZV29 1317 aa13.64□□□□□ -0.23
HNRNPC-224ENST00000556226 CHD4Q14839 1912 aa13.63□□□□□ -0.23
HNRNPC-224ENST00000556226 PRIM1P49642 420 aaKnown RBP13.63□□□□□ -0.23
HNRNPC-224ENST00000556226 SLC27A3Q5K4L6 730 aa13.62□□□□□ -0.23
HNRNPC-224ENST00000556226 SYTL4Q96C24 671 aaPredicted RBP13.62□□□□□ -0.23
HNRNPC-224ENST00000556226 FYB1O15117 783 aa13.6□□□□□ -0.23
HNRNPC-224ENST00000556226 AMPHP49418 695 aa13.6□□□□□ -0.23
HNRNPC-224ENST00000556226 RRS1Q15050 365 aaKnown RBP13.6□□□□□ -0.23
HNRNPC-224ENST00000556226 NBPF6Q5VWK0 638 aa13.6□□□□□ -0.23
HNRNPC-224ENST00000556226 USHBP1Q8N6Y0 703 aa13.6□□□□□ -0.23
HNRNPC-224ENST00000556226 NBPF4Q96M43 638 aa13.6□□□□□ -0.23
HNRNPC-224ENST00000556226 RTL1A6NKG5 1358 aa13.59□□□□□ -0.23
HNRNPC-224ENST00000556226 ZCRB1Q8TBF4 217 aaKnown RBP13.59□□□□□ -0.23
HNRNPC-224ENST00000556226 SLC16A10Q8TF71 515 aa13.59□□□□□ -0.23
HNRNPC-224ENST00000556226 GGNBP2Q9H3C7 697 aa13.59□□□□□ -0.23
HNRNPC-224ENST00000556226 TFCP2L1Q9NZI6 479 aa13.59□□□□□ -0.23
HNRNPC-224ENST00000556226 KLHL34Q8N239 644 aa13.58□□□□□ -0.24
HNRNPC-224ENST00000556226 NLGN2Q8NFZ4 835 aa13.58□□□□□ -0.24
HNRNPC-224ENST00000556226 EIF4G2P78344 907 aaKnown RBP eCLIP13.57□□□□□ -0.24
HNRNPC-224ENST00000556226 GPR162Q16538 588 aa13.56□□□□□ -0.24
HNRNPC-224ENST00000556226 CARD14Q9BXL6 1004 aa13.56□□□□□ -0.24
HNRNPC-224ENST00000556226 CCNL1Q9UK58 526 aaPredicted RBP13.56□□□□□ -0.24
HNRNPC-224ENST00000556226 KIF20BQ96Q89 1820 aa13.55□□□□□ -0.24
HNRNPC-224ENST00000556226 POLD1P28340 1107 aa13.55□□□□□ -0.24
HNRNPC-224ENST00000556226 HSP90AB2PQ58FF8 381 aa13.55□□□□□ -0.24
HNRNPC-224ENST00000556226 TOGARAM1Q9Y4F4 1720 aa13.55□□□□□ -0.24
HNRNPC-224ENST00000556226 C5P01031 1676 aa13.54□□□□□ -0.24
HNRNPC-224ENST00000556226 COL23A1Q86Y22 540 aaPredicted RBP13.54□□□□□ -0.24
HNRNPC-224ENST00000556226 MSL1Q68DK7 614 aa13.53□□□□□ -0.24
HNRNPC-224ENST00000556226 PELP1Q8IZL8 1130 aaKnown RBP13.53□□□□□ -0.24
HNRNPC-224ENST00000556226 RAPGEF4Q8WZA2 1011 aa13.53□□□□□ -0.24
HNRNPC-224ENST00000556226 INSRP06213 1382 aa13.53□□□□□ -0.24
HNRNPC-224ENST00000556226 KIF24Q5T7B8 1368 aa13.53□□□□□ -0.24
HNRNPC-224ENST00000556226 SMG6Q86US8 1419 aaKnown RBP13.53□□□□□ -0.24
HNRNPC-224ENST00000556226 TAF1LQ8IZX4 1826 aa13.53□□□□□ -0.24
HNRNPC-224ENST00000556226 CEP350Q5VT06 3117 aa13.52□□□□□ -0.24
HNRNPC-224ENST00000556226 HSPA5P11021 654 aaKnown RBP13.52□□□□□ -0.25
HNRNPC-224ENST00000556226 YBX3P16989 372 aaKnown RBP eCLIP13.52□□□□□ -0.25
HNRNPC-224ENST00000556226 C1QTNF8P60827 252 aa13.52□□□□□ -0.25
HNRNPC-224ENST00000556226 CGNL1Q0VF96 1302 aa13.52□□□□□ -0.25
HNRNPC-224ENST00000556226 FLT4P35916 1363 aa13.52□□□□□ -0.25
HNRNPC-224ENST00000556226 PKD1L3Q7Z443 1732 aa13.51□□□□□ -0.25
HNRNPC-224ENST00000556226 PALLDQ8WX93 1383 aa13.51□□□□□ -0.25
HNRNPC-224ENST00000556226 CYP27B1O15528 508 aa13.51□□□□□ -0.25
HNRNPC-224ENST00000556226 MSH5O43196 834 aa13.51□□□□□ -0.25
HNRNPC-224ENST00000556226 NCAPD2Q15021 1401 aa13.5□□□□□ -0.25
HNRNPC-224ENST00000556226 NSD3Q9BZ95 1437 aa13.5□□□□□ -0.25
HNRNPC-224ENST00000556226 PCDH11XQ9BZA7 1347 aa13.5□□□□□ -0.25
HNRNPC-224ENST00000556226 PCDH11YQ9BZA8 1340 aa13.5□□□□□ -0.25
HNRNPC-224ENST00000556226 TATP17735 454 aaPredicted RBP13.5□□□□□ -0.25
HNRNPC-224ENST00000556226 AMIGO3Q86WK7 504 aa13.5□□□□□ -0.25
HNRNPC-224ENST00000556226 EMILIN1Q9Y6C2 1016 aa13.5□□□□□ -0.25
HNRNPC-224ENST00000556226 ITGB4P16144 1822 aa13.5□□□□□ -0.25
HNRNPC-224ENST00000556226 SENP3-EIF4A1A0A087X0R7 540 aa13.49□□□□□ -0.25
HNRNPC-224ENST00000556226 POLR3GLQ9BT43 218 aa13.49□□□□□ -0.25
HNRNPC-224ENST00000556226 C4BP0C0L5 1744 aa13.49□□□□□ -0.25
HNRNPC-224ENST00000556226 ANKRD26Q9UPS8 1709 aa13.49□□□□□ -0.25
HNRNPC-224ENST00000556226 MPRIPQ6WCQ1 1025 aa13.48□□□□□ -0.25
HNRNPC-224ENST00000556226 SMIM5Q71RC9 77 aa13.48□□□□□ -0.25
HNRNPC-224ENST00000556226 UBR3Q6ZT12 1888 aa13.47□□□□□ -0.25
HNRNPC-224ENST00000556226 MAP2P11137 1827 aaKnown RBP13.46□□□□□ -0.25
HNRNPC-224ENST00000556226 PANK3Q9H999 370 aa13.46□□□□□ -0.25
HNRNPC-224ENST00000556226 WASHC2AQ641Q2 1341 aa13.45□□□□□ -0.26
HNRNPC-224ENST00000556226 GIGYF1O75420 1035 aaPredicted RBP13.45□□□□□ -0.26
HNRNPC-224ENST00000556226 PIGBQ92521 554 aa13.45□□□□□ -0.26
HNRNPC-224ENST00000556226 PPM1GO15355 546 aaPredicted RBP13.43□□□□□ -0.26
HNRNPC-224ENST00000556226 GRIN3BO60391 1043 aa13.43□□□□□ -0.26
HNRNPC-224ENST00000556226 PHF14O94880 888 aa13.43□□□□□ -0.26
HNRNPC-224ENST00000556226 NKX1-1Q15270 411 aaPredicted RBP13.43□□□□□ -0.26
HNRNPC-224ENST00000556226 FLAD1Q8NFF5 587 aa13.43□□□□□ -0.26
HNRNPC-224ENST00000556226 ATP10DQ9P241 1426 aa13.43□□□□□ -0.26
HNRNPC-224ENST00000556226 POLKQ9UBT6 870 aa13.43□□□□□ -0.26
HNRNPC-224ENST00000556226 CD2APQ9Y5K6 639 aa13.43□□□□□ -0.26
HNRNPC-224ENST00000556226 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.42□□□□□ -0.26
HNRNPC-224ENST00000556226 LINC00116Q8NCU8 138 aa13.42□□□□□ -0.26
HNRNPC-224ENST00000556226 SMARCC1Q92922 1105 aaPredicted RBP13.42□□□□□ -0.26
HNRNPC-224ENST00000556226 AK7Q96M32 723 aa13.42□□□□□ -0.26
HNRNPC-224ENST00000556226 EYA1Q99502 592 aa13.42□□□□□ -0.26
HNRNPC-224ENST00000556226 ITPK1Q13572 414 aa13.41□□□□□ -0.26
HNRNPC-224ENST00000556226 WWC3Q9ULE0 1092 aa13.41□□□□□ -0.26
HNRNPC-224ENST00000556226 ASAP1Q9ULH1 1129 aa13.41□□□□□ -0.26
HNRNPC-224ENST00000556226 LOC102724428A0A0B4J2F2 783 aa13.4□□□□□ -0.26
HNRNPC-224ENST00000556226 SIK1P57059 783 aa13.4□□□□□ -0.26
HNRNPC-224ENST00000556226 SPG7Q9UQ90 795 aa13.4□□□□□ -0.26
HNRNPC-224ENST00000556226 ADCY9O60503 1353 aa13.4□□□□□ -0.26
HNRNPC-224ENST00000556226 KNSTRNQ9Y448 316 aa13.39□□□□□ -0.27
HNRNPC-224ENST00000556226 IGSF1Q8N6C5 1336 aa13.39□□□□□ -0.27
HNRNPC-224ENST00000556226 PHKG2P15735 406 aa13.38□□□□□ -0.27
HNRNPC-224ENST00000556226 HMGB2P26583 209 aaKnown RBP13.38□□□□□ -0.27
HNRNPC-224ENST00000556226 SSFA2P28290 1259 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms