RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 HMOX1P09601 288 aa10.15□□□□□ -0.78
TDP1-214ENST00000556063 C1QBPQ07021 282 aaKnown RBP10.15□□□□□ -0.78
TDP1-214ENST00000556063 PDE3BQ13370 1112 aa10.15□□□□□ -0.78
TDP1-214ENST00000556063 DDB1Q16531 1140 aa10.15□□□□□ -0.78
TDP1-214ENST00000556063 AMOTQ4VCS5 1084 aa10.15□□□□□ -0.78
TDP1-214ENST00000556063 PLEKHO1Q53GL0 409 aaPredicted RBP10.15□□□□□ -0.78
TDP1-214ENST00000556063 SEPT12Q8IYM1 358 aa10.15□□□□□ -0.78
TDP1-214ENST00000556063 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.15□□□□□ -0.781e-6■■■■□ 25.6
TDP1-214ENST00000556063 SPG7Q9UQ90 795 aa10.15□□□□□ -0.78
TDP1-214ENST00000556063 NCAPD2Q15021 1401 aa10.15□□□□□ -0.79
TDP1-214ENST00000556063 KDRP35968 1356 aa10.14□□□□□ -0.79
TDP1-214ENST00000556063 RGPD1P0DJD0 1748 aa10.14□□□□□ -0.79
TDP1-214ENST00000556063 HOXD11P31277 338 aaPredicted RBP10.14□□□□□ -0.79
TDP1-214ENST00000556063 ZCRB1Q8TBF4 217 aaKnown RBP10.14□□□□□ -0.79
TDP1-214ENST00000556063 PARP4Q9UKK3 1724 aaKnown RBP10.13□□□□□ -0.79
TDP1-214ENST00000556063 KAT6BQ8WYB5 2073 aa10.13□□□□□ -0.79
TDP1-214ENST00000556063 PRKAR2BP31323 418 aa10.13□□□□□ -0.79
TDP1-214ENST00000556063 AEBP1Q8IUX7 1158 aa10.13□□□□□ -0.79
TDP1-214ENST00000556063 MIER1Q8N108 512 aa10.13□□□□□ -0.79
TDP1-214ENST00000556063 DISP2A7MBM2 1401 aa10.13□□□□□ -0.79
TDP1-214ENST00000556063 WNK3Q9BYP7 1800 aa10.12□□□□□ -0.79
TDP1-214ENST00000556063 MAPK8IP3Q9UPT6 1336 aa10.12□□□□□ -0.79
TDP1-214ENST00000556063 KRT27Q7Z3Y8 459 aa10.12□□□□□ -0.79
TDP1-214ENST00000556063 PNISRQ8TF01 805 aaKnown RBP10.12□□□□□ -0.79
TDP1-214ENST00000556063 RSPH6AQ9H0K4 717 aa10.12□□□□□ -0.79
TDP1-214ENST00000556063 OVOS2A0A0G2JMS6 1433 aa10.12□□□□□ -0.79
TDP1-214ENST00000556063 PCDH11XQ9BZA7 1347 aa10.11□□□□□ -0.79
TDP1-214ENST00000556063 PCDH11YQ9BZA8 1340 aa10.11□□□□□ -0.79
TDP1-214ENST00000556063 TNS2Q63HR2 1409 aa10.11□□□□□ -0.79
TDP1-214ENST00000556063 HSP90AB1P08238 724 aaKnown RBP10.11□□□□□ -0.79
TDP1-214ENST00000556063 CCDC184Q52MB2 194 aa10.11□□□□□ -0.79
TDP1-214ENST00000556063 C1orf141Q5JVX7 400 aa10.11□□□□□ -0.79
TDP1-214ENST00000556063 GAS2L2Q8NHY3 880 aa10.11□□□□□ -0.79
TDP1-214ENST00000556063 ADAMTS8Q9UP79 889 aa10.11□□□□□ -0.79
TDP1-214ENST00000556063 THSD7AQ9UPZ6 1657 aa10.11□□□□□ -0.79
TDP1-214ENST00000556063 MEGF6O75095 1541 aa10.11□□□□□ -0.79
TDP1-214ENST00000556063 RGS12O14924 1447 aa10.1□□□□□ -0.79
TDP1-214ENST00000556063 ZNF530Q6P9A1 599 aaPredicted RBP10.1□□□□□ -0.79
TDP1-214ENST00000556063 IFNL2Q8IZJ0 200 aa10.1□□□□□ -0.79
TDP1-214ENST00000556063 DDX54Q8TDD1 881 aaKnown RBP10.1□□□□□ -0.79
TDP1-214ENST00000556063 RUNDC1Q96C34 613 aa10.1□□□□□ -0.79
TDP1-214ENST00000556063 FAM196AQ6ZSG2 479 aa10.09□□□□□ -0.79
TDP1-214ENST00000556063 FAM9BQ8IZU0 186 aa10.09□□□□□ -0.79
TDP1-214ENST00000556063 LRRC37A3O60309 1634 aa10.08□□□□□ -0.8
TDP1-214ENST00000556063 PKD1L3Q7Z443 1732 aa10.07□□□□□ -0.8
TDP1-214ENST00000556063 BRWD3Q6RI45 1802 aa10.07□□□□□ -0.8
TDP1-214ENST00000556063 PHKG2P15735 406 aa10.07□□□□□ -0.8
TDP1-214ENST00000556063 LMOD3Q0VAK6 560 aa10.07□□□□□ -0.8
TDP1-214ENST00000556063 MTHFSDQ2M296 383 aaKnown RBP10.07□□□□□ -0.8
TDP1-214ENST00000556063 AKAP4Q5JQC9 854 aa10.07□□□□□ -0.8
TDP1-214ENST00000556063 MARCH10Q8NA82 808 aaPredicted RBP10.07□□□□□ -0.8
TDP1-214ENST00000556063 RTF1Q92541 710 aaKnown RBP10.07□□□□□ -0.8
TDP1-214ENST00000556063 PHACTR3Q96KR7 559 aa10.07□□□□□ -0.8
TDP1-214ENST00000556063 PLEKHF1Q96S99 279 aa10.07□□□□□ -0.8
TDP1-214ENST00000556063 GNAT3A8MTJ3 354 aa10.06□□□□□ -0.8
TDP1-214ENST00000556063 CYP27B1O15528 508 aa10.06□□□□□ -0.8
TDP1-214ENST00000556063 HTATSF1O43719 755 aaKnown RBP10.06□□□□□ -0.8
TDP1-214ENST00000556063 NFE2L2Q16236 605 aa10.06□□□□□ -0.8
TDP1-214ENST00000556063 CCDC146Q8IYE0 955 aa10.06□□□□□ -0.8
TDP1-214ENST00000556063 DCAF5Q96JK2 942 aa10.06□□□□□ -0.8
TDP1-214ENST00000556063 MAP3K5Q99683 1374 aa10.05□□□□□ -0.8
TDP1-214ENST00000556063 NKX1-1Q15270 411 aaPredicted RBP10.05□□□□□ -0.8
TDP1-214ENST00000556063 NGEFQ8N5V2 710 aa10.05□□□□□ -0.8
TDP1-214ENST00000556063 BCL9O00512 1426 aa10.05□□□□□ -0.8
TDP1-214ENST00000556063 ERVV-2B6SEH9 535 aa10.04□□□□□ -0.8
TDP1-214ENST00000556063 APAF1O14727 1248 aa10.04□□□□□ -0.8
TDP1-214ENST00000556063 TMPOP42166 694 aaKnown RBP10.04□□□□□ -0.8
TDP1-214ENST00000556063 RIPK4P57078 832 aa10.04□□□□□ -0.8
TDP1-214ENST00000556063 CABP4P57796 275 aa10.03□□□□□ -0.8
TDP1-214ENST00000556063 SF3B2Q13435 895 aaKnown RBP10.03□□□□□ -0.8
TDP1-214ENST00000556063 NEUROD2Q15784 382 aa10.03□□□□□ -0.8
TDP1-214ENST00000556063 FAM182BQ5T319 152 aa10.03□□□□□ -0.8
TDP1-214ENST00000556063 MPRIPQ6WCQ1 1025 aa10.03□□□□□ -0.8
TDP1-214ENST00000556063 CCDC125Q86Z20 511 aa10.03□□□□□ -0.8
TDP1-214ENST00000556063 SYTL4Q96C24 671 aaPredicted RBP10.03□□□□□ -0.8
TDP1-214ENST00000556063 SHANK3Q9BYB0 1731 aa10.03□□□□□ -0.8
TDP1-214ENST00000556063 RNMTO43148 476 aaKnown RBP10.02□□□□□ -0.81
TDP1-214ENST00000556063 PRIM1P49642 420 aaKnown RBP10.02□□□□□ -0.81
TDP1-214ENST00000556063 CALD1Q05682 793 aaKnown RBP10.02□□□□□ -0.81
TDP1-214ENST00000556063 TEFQ10587 303 aa10.02□□□□□ -0.81
TDP1-214ENST00000556063 NCBP3Q53F19 620 aaKnown RBP10.02□□□□□ -0.81
TDP1-214ENST00000556063 BCL11BQ9C0K0 894 aaPredicted RBP10.02□□□□□ -0.81
TDP1-214ENST00000556063 TMOD3Q9NYL9 352 aa10.02□□□□□ -0.81
TDP1-214ENST00000556063 TRIM37O94972 964 aa10.01□□□□□ -0.81
TDP1-214ENST00000556063 ACSBG1Q96GR2 724 aa10.01□□□□□ -0.81
TDP1-214ENST00000556063 RRP7AQ9Y3A4 280 aaKnown RBP10.01□□□□□ -0.81
TDP1-214ENST00000556063 DLG5Q8TDM6 1919 aa10□□□□□ -0.81
TDP1-214ENST00000556063 HMGB2P26583 209 aaKnown RBP10□□□□□ -0.81
TDP1-214ENST00000556063 ILDR2Q71H61 639 aa10□□□□□ -0.81
TDP1-214ENST00000556063 IL17REQ8NFR9 667 aa10□□□□□ -0.81
TDP1-214ENST00000556063 SCN11AQ9UI33 1791 aa10□□□□□ -0.81
TDP1-214ENST00000556063 KDM6AO15550 1401 aaPredicted RBP9.99□□□□□ -0.81
TDP1-214ENST00000556063 SBF2Q86WG5 1849 aa9.99□□□□□ -0.81
TDP1-214ENST00000556063 CCDC27Q2M243 656 aa9.99□□□□□ -0.81
TDP1-214ENST00000556063 MCM10Q7L590 875 aa9.99□□□□□ -0.81
TDP1-214ENST00000556063 SMARCC1Q92922 1105 aaPredicted RBP9.99□□□□□ -0.81
TDP1-214ENST00000556063 SLC52A2Q9HAB3 445 aa9.99□□□□□ -0.81
TDP1-214ENST00000556063 LGR6Q9HBX8 967 aa9.99□□□□□ -0.81
TDP1-214ENST00000556063 DOT1LQ8TEK3 1739 aa9.99□□□□□ -0.81
TDP1-214ENST00000556063 VIRMAQ69YN4 1812 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms