RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 LRRC4BQ9NT99 713 aa10.79□□□□□ -0.68
PTCSC3-201ENST00000556013 KAT6BQ8WYB5 2073 aa10.79□□□□□ -0.68
PTCSC3-201ENST00000556013 NHSQ6T4R5 1651 aa10.79□□□□□ -0.68
PTCSC3-201ENST00000556013 ZBTB7AO95365 584 aa10.78□□□□□ -0.68
PTCSC3-201ENST00000556013 PDGFDQ9GZP0 370 aaPredicted RBP10.78□□□□□ -0.68
PTCSC3-201ENST00000556013 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.78□□□□□ -0.68
PTCSC3-201ENST00000556013 ATF5Q9Y2D1 282 aaPredicted RBP10.78□□□□□ -0.68
PTCSC3-201ENST00000556013 WASHC2AQ641Q2 1341 aa10.78□□□□□ -0.68
PTCSC3-201ENST00000556013 NSD2O96028 1365 aa10.77□□□□□ -0.68
PTCSC3-201ENST00000556013 EIF4G2P78344 907 aaKnown RBP eCLIP10.77□□□□□ -0.69
PTCSC3-201ENST00000556013 SYT17Q9BSW7 474 aa10.77□□□□□ -0.69
PTCSC3-201ENST00000556013 PCGF6Q9BYE7 350 aa10.77□□□□□ -0.69
PTCSC3-201ENST00000556013 NKX1-1Q15270 411 aaPredicted RBP10.76□□□□□ -0.69
PTCSC3-201ENST00000556013 SYTL4Q96C24 671 aaPredicted RBP10.76□□□□□ -0.69
PTCSC3-201ENST00000556013 PCDH11XQ9BZA7 1347 aa10.76□□□□□ -0.69
PTCSC3-201ENST00000556013 PCDH11YQ9BZA8 1340 aa10.76□□□□□ -0.69
PTCSC3-201ENST00000556013 MAP3K5Q99683 1374 aa10.76□□□□□ -0.69
PTCSC3-201ENST00000556013 PLEKHG2Q9H7P9 1386 aa10.76□□□□□ -0.69
PTCSC3-201ENST00000556013 CASZ1Q86V15 1759 aa10.75□□□□□ -0.69
PTCSC3-201ENST00000556013 YY1P25490 414 aa10.75□□□□□ -0.69
PTCSC3-201ENST00000556013 ZNF827Q17R98 1081 aa10.75□□□□□ -0.69
PTCSC3-201ENST00000556013 ARXQ96QS3 562 aa10.75□□□□□ -0.69
PTCSC3-201ENST00000556013 FLAD1Q8NFF5 587 aa10.74□□□□□ -0.69
PTCSC3-201ENST00000556013 SMARCC1Q92922 1105 aaPredicted RBP10.74□□□□□ -0.69
PTCSC3-201ENST00000556013 TFCP2L1Q9NZI6 479 aa10.74□□□□□ -0.69
PTCSC3-201ENST00000556013 POLKQ9UBT6 870 aa10.74□□□□□ -0.69
PTCSC3-201ENST00000556013 SPG7Q9UQ90 795 aa10.74□□□□□ -0.69
PTCSC3-201ENST00000556013 NSD3Q9BZ95 1437 aa10.74□□□□□ -0.69
PTCSC3-201ENST00000556013 MEGF6O75095 1541 aa10.74□□□□□ -0.69
PTCSC3-201ENST00000556013 BTAF1O14981 1849 aa10.73□□□□□ -0.69
PTCSC3-201ENST00000556013 POLD1P28340 1107 aa10.73□□□□□ -0.69
PTCSC3-201ENST00000556013 FHDC1Q9C0D6 1143 aaPredicted RBP10.73□□□□□ -0.69
PTCSC3-201ENST00000556013 CCNL1Q9UK58 526 aaPredicted RBP10.73□□□□□ -0.69
PTCSC3-201ENST00000556013 EMILIN1Q9Y6C2 1016 aa10.73□□□□□ -0.69
PTCSC3-201ENST00000556013 NCAPD2Q15021 1401 aa10.73□□□□□ -0.69
PTCSC3-201ENST00000556013 CYP27B1O15528 508 aa10.72□□□□□ -0.69
PTCSC3-201ENST00000556013 USHBP1Q8N6Y0 703 aa10.72□□□□□ -0.69
PTCSC3-201ENST00000556013 EYA1Q99502 592 aa10.72□□□□□ -0.69
PTCSC3-201ENST00000556013 PNPLA7Q6ZV29 1317 aa10.72□□□□□ -0.69
PTCSC3-201ENST00000556013 PAPPAQ13219 1627 aa10.72□□□□□ -0.69
PTCSC3-201ENST00000556013 PPM1GO15355 546 aaPredicted RBP10.71□□□□□ -0.69
PTCSC3-201ENST00000556013 HSPA5P11021 654 aaKnown RBP10.7□□□□□ -0.7
PTCSC3-201ENST00000556013 MPRIPQ6WCQ1 1025 aa10.7□□□□□ -0.7
PTCSC3-201ENST00000556013 IFNL2Q8IZJ0 200 aa10.7□□□□□ -0.7
PTCSC3-201ENST00000556013 CCER1Q8TC90 406 aaPredicted RBP10.7□□□□□ -0.7
PTCSC3-201ENST00000556013 PANK3Q9H999 370 aa10.7□□□□□ -0.7
PTCSC3-201ENST00000556013 HSP90AB1P08238 724 aaKnown RBP10.68□□□□□ -0.7
PTCSC3-201ENST00000556013 EIF4A2Q14240 407 aaKnown RBP10.68□□□□□ -0.7
PTCSC3-201ENST00000556013 COL23A1Q86Y22 540 aaPredicted RBP10.68□□□□□ -0.7
PTCSC3-201ENST00000556013 PIGBQ92521 554 aa10.68□□□□□ -0.7
PTCSC3-201ENST00000556013 KIF20BQ96Q89 1820 aa10.68□□□□□ -0.7
PTCSC3-201ENST00000556013 RGPD2P0DJD1 1756 aa10.67□□□□□ -0.7
PTCSC3-201ENST00000556013 LY75O60449 1722 aa10.67□□□□□ -0.7
PTCSC3-201ENST00000556013 QSER1Q2KHR3 1735 aa10.67□□□□□ -0.7
PTCSC3-201ENST00000556013 PALLDQ8WX93 1383 aa10.67□□□□□ -0.7
PTCSC3-201ENST00000556013 UTRNP46939 3433 aa10.67□□□□□ -0.7
PTCSC3-201ENST00000556013 ERVV-2B6SEH9 535 aa10.67□□□□□ -0.7
PTCSC3-201ENST00000556013 PHKG2P15735 406 aa10.67□□□□□ -0.7
PTCSC3-201ENST00000556013 KCNQ4P56696 695 aa10.67□□□□□ -0.7
PTCSC3-201ENST00000556013 AMOTQ4VCS5 1084 aa10.67□□□□□ -0.7
PTCSC3-201ENST00000556013 POLR3GLQ9BT43 218 aa10.67□□□□□ -0.7
PTCSC3-201ENST00000556013 IGSF1Q8N6C5 1336 aa10.66□□□□□ -0.7
PTCSC3-201ENST00000556013 PLEKHO1Q53GL0 409 aaPredicted RBP10.66□□□□□ -0.7
PTCSC3-201ENST00000556013 TMOD3Q9NYL9 352 aa10.66□□□□□ -0.7
PTCSC3-201ENST00000556013 KNSTRNQ9Y448 316 aa10.66□□□□□ -0.7
PTCSC3-201ENST00000556013 SHANK3Q9BYB0 1731 aa10.66□□□□□ -0.7
PTCSC3-201ENST00000556013 MYOM1P52179 1685 aa10.66□□□□□ -0.7
PTCSC3-201ENST00000556013 MAP2P11137 1827 aaKnown RBP10.65□□□□□ -0.7
PTCSC3-201ENST00000556013 COL24A1Q17RW2 1714 aa10.65□□□□□ -0.7
PTCSC3-201ENST00000556013 LOC102724428A0A0B4J2F2 783 aa10.65□□□□□ -0.7
PTCSC3-201ENST00000556013 GRIN3BO60391 1043 aa10.65□□□□□ -0.7
PTCSC3-201ENST00000556013 SSFA2P28290 1259 aa10.65□□□□□ -0.7
PTCSC3-201ENST00000556013 SIK1P57059 783 aa10.65□□□□□ -0.7
PTCSC3-201ENST00000556013 MORC1Q86VD1 984 aa10.65□□□□□ -0.7
PTCSC3-201ENST00000556013 DCAF5Q96JK2 942 aa10.65□□□□□ -0.7
PTCSC3-201ENST00000556013 CD2APQ9Y5K6 639 aa10.65□□□□□ -0.7
PTCSC3-201ENST00000556013 GPR162Q16538 588 aa10.64□□□□□ -0.71
PTCSC3-201ENST00000556013 AK7Q96M32 723 aa10.64□□□□□ -0.71
PTCSC3-201ENST00000556013 DOT1LQ8TEK3 1739 aa10.64□□□□□ -0.71
PTCSC3-201ENST00000556013 ANKRD26Q9UPS8 1709 aa10.64□□□□□ -0.71
PTCSC3-201ENST00000556013 MSH5O43196 834 aa10.63□□□□□ -0.71
PTCSC3-201ENST00000556013 TNNT2P45379 298 aaPredicted RBP10.63□□□□□ -0.71
PTCSC3-201ENST00000556013 RC3H1Q5TC82 1133 aaKnown RBP10.63□□□□□ -0.71
PTCSC3-201ENST00000556013 PKD1L3Q7Z443 1732 aa10.62□□□□□ -0.71
PTCSC3-201ENST00000556013 ATP6V1AP38606 617 aa10.62□□□□□ -0.71
PTCSC3-201ENST00000556013 ZNF784Q8NCA9 323 aaPredicted RBP10.62□□□□□ -0.71
PTCSC3-201ENST00000556013 ATG3Q9NT62 314 aa10.62□□□□□ -0.71
PTCSC3-201ENST00000556013 ASAP1Q9ULH1 1129 aa10.62□□□□□ -0.71
PTCSC3-201ENST00000556013 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.61□□□□□ -0.71
PTCSC3-201ENST00000556013 PER1O15534 1290 aaPredicted RBP10.61□□□□□ -0.71
PTCSC3-201ENST00000556013 AMER1Q5JTC6 1135 aaPredicted RBP10.61□□□□□ -0.71
PTCSC3-201ENST00000556013 ADRA2BP18089 450 aa10.6□□□□□ -0.71
PTCSC3-201ENST00000556013 IL13P35225 146 aa10.6□□□□□ -0.71
PTCSC3-201ENST00000556013 MTHFSP49914 203 aa10.6□□□□□ -0.71
PTCSC3-201ENST00000556013 KDRP35968 1356 aa10.6□□□□□ -0.71
PTCSC3-201ENST00000556013 CABP4P57796 275 aa10.59□□□□□ -0.71
PTCSC3-201ENST00000556013 ITPK1Q13572 414 aa10.59□□□□□ -0.71
PTCSC3-201ENST00000556013 C1orf141Q5JVX7 400 aa10.59□□□□□ -0.71
PTCSC3-201ENST00000556013 TRAPPC3LQ5T215 181 aa10.59□□□□□ -0.71
PTCSC3-201ENST00000556013 KLHL34Q8N239 644 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms