RNA–Protein interactions for RNA: ENST00000555955.3

SIX1-205, Transcript of SIX homeobox 1, humanhuman

TSL 2

Gene SIX1, Length 2,844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-205ENST00000555955 PLA2R1Q13018 1463 aa17.56■□□□□ 0.4
SIX1-205ENST00000555955 IPO8O15397 1037 aaKnown RBP17.56■□□□□ 0.4
SIX1-205ENST00000555955 TNNT1P13805 278 aa17.56■□□□□ 0.4
SIX1-205ENST00000555955 RAD51AP2Q09MP3 1159 aa17.56■□□□□ 0.4
SIX1-205ENST00000555955 CCDC183Q5T5S1 534 aa17.56■□□□□ 0.4
SIX1-205ENST00000555955 USP48Q86UV5 1035 aa17.56■□□□□ 0.4
SIX1-205ENST00000555955 ZNF397Q8NF99 534 aaPredicted RBP17.56■□□□□ 0.4
SIX1-205ENST00000555955 DNAJC5Q9H3Z4 198 aa17.56■□□□□ 0.4
SIX1-205ENST00000555955 SYCP2Q9BX26 1530 aa17.55■□□□□ 0.4
SIX1-205ENST00000555955 LOC102724159A0A0B4J2E5 919 aa17.55■□□□□ 0.4
SIX1-205ENST00000555955 AP5Z1O43299 807 aa17.55■□□□□ 0.4
SIX1-205ENST00000555955 PWP2Q15269 919 aaKnown RBP17.55■□□□□ 0.4
SIX1-205ENST00000555955 CYP2C19P33261 490 aa17.55■□□□□ 0.4
SIX1-205ENST00000555955 CREBRFQ8IUR6 639 aa17.55■□□□□ 0.4
SIX1-205ENST00000555955 CFAP44Q96MT7 982 aa17.55■□□□□ 0.4
SIX1-205ENST00000555955 PAXBP1Q9Y5B6 917 aa17.55■□□□□ 0.4
SIX1-205ENST00000555955 NEO1Q92859 1461 aa17.54■□□□□ 0.4
SIX1-205ENST00000555955 C1orf115Q9H7X2 142 aa17.54■□□□□ 0.4
SIX1-205ENST00000555955 PPIP5K1Q6PFW1 1433 aa17.54■□□□□ 0.4
SIX1-205ENST00000555955 YY1AP1Q9H869 796 aa17.54■□□□□ 0.4
SIX1-205ENST00000555955 FAM53CQ9NYF3 392 aa17.54■□□□□ 0.4
SIX1-205ENST00000555955 RSPH14Q9UHP6 348 aa17.54■□□□□ 0.4
SIX1-205ENST00000555955 MYOM1P52179 1685 aa17.53■□□□□ 0.4
SIX1-205ENST00000555955 U2SURPO15042 1029 aaKnown RBP17.53■□□□□ 0.4
SIX1-205ENST00000555955 APPP05067 770 aa17.53■□□□□ 0.4
SIX1-205ENST00000555955 NOL10Q9BSC4 688 aaKnown RBP17.53■□□□□ 0.4
SIX1-205ENST00000555955 IFT57Q9NWB7 429 aa17.53■□□□□ 0.4
SIX1-205ENST00000555955 FANCAO15360 1455 aa17.53■□□□□ 0.4
SIX1-205ENST00000555955 PRR29P0C7W0 189 aa17.53■□□□□ 0.4
SIX1-205ENST00000555955 PTGS1P23219 599 aa17.53■□□□□ 0.4
SIX1-205ENST00000555955 RBM6P78332 1123 aaKnown RBP17.53■□□□□ 0.4
SIX1-205ENST00000555955 INTS3Q68E01 1043 aaKnown RBP17.53■□□□□ 0.4
SIX1-205ENST00000555955 TMX3Q96JJ7 454 aa17.53■□□□□ 0.4
SIX1-205ENST00000555955 KCNG1Q9UIX4 513 aa17.53■□□□□ 0.4
SIX1-205ENST00000555955 MX1P20591 662 aa17.53■□□□□ 0.4
SIX1-205ENST00000555955 GEMIN8Q9NWZ8 242 aaKnown RBP17.53■□□□□ 0.4
SIX1-205ENST00000555955 MORC1Q86VD1 984 aa17.52■□□□□ 0.39
SIX1-205ENST00000555955 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.51■□□□□ 0.39
SIX1-205ENST00000555955 CD109Q6YHK3 1445 aa17.51■□□□□ 0.39
SIX1-205ENST00000555955 RNF17Q9BXT8 1623 aaKnown RBP17.5■□□□□ 0.39
SIX1-205ENST00000555955 SHPRHQ149N8 1683 aa17.5■□□□□ 0.39
SIX1-205ENST00000555955 NEK4P51957 841 aa17.5■□□□□ 0.39
SIX1-205ENST00000555955 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.5■□□□□ 0.39
SIX1-205ENST00000555955 V9GYY5 206 aaPredicted RBP17.5■□□□□ 0.39
SIX1-205ENST00000555955 INO80Q9ULG1 1556 aaPredicted RBP17.5■□□□□ 0.39
SIX1-205ENST00000555955 PLEKHM2Q8IWE5 1019 aa17.5■□□□□ 0.39
SIX1-205ENST00000555955 ZNF592Q92610 1267 aa17.5■□□□□ 0.39
SIX1-205ENST00000555955 NOS1P29475 1434 aa17.5■□□□□ 0.39
SIX1-205ENST00000555955 PSEN1P49768 467 aa17.49■□□□□ 0.39
SIX1-205ENST00000555955 MMP14P50281 582 aa17.49■□□□□ 0.39
SIX1-205ENST00000555955 FBXO38Q6PIJ6 1188 aa17.49■□□□□ 0.39
SIX1-205ENST00000555955 ZBTB7BO15156 539 aaPredicted RBP17.48■□□□□ 0.39
SIX1-205ENST00000555955 LRMPQ12912 555 aa17.48■□□□□ 0.39
SIX1-205ENST00000555955 RTF1Q92541 710 aaKnown RBP17.48■□□□□ 0.39
SIX1-205ENST00000555955 KIF1BPQ96EK5 621 aa17.48■□□□□ 0.39
SIX1-205ENST00000555955 RASSF4Q9H2L5 321 aa17.48■□□□□ 0.39
SIX1-205ENST00000555955 TTC22Q5TAA0 569 aa17.48■□□□□ 0.39
SIX1-205ENST00000555955 EP400NLQ6ZTU2 488 aa17.48■□□□□ 0.39
SIX1-205ENST00000555955 U2AF1L5P0DN76 240 aaPredicted RBP17.48■□□□□ 0.39
SIX1-205ENST00000555955 U2AF1Q01081 240 aaKnown RBP eCLIP17.48■□□□□ 0.39
SIX1-205ENST00000555955 EFCAB2Q5VUJ9 269 aa17.48■□□□□ 0.39
SIX1-205ENST00000555955 GIMAP6Q6P9H5 292 aa17.48■□□□□ 0.39
SIX1-205ENST00000555955 SIRT2Q8IXJ6 389 aa17.48■□□□□ 0.39
SIX1-205ENST00000555955 ZNF215Q9UL58 517 aaPredicted RBP17.48■□□□□ 0.39
SIX1-205ENST00000555955 CASC1Q6TDU7 716 aa17.47■□□□□ 0.39
SIX1-205ENST00000555955 CCDC186Q7Z3E2 898 aa17.47■□□□□ 0.39
SIX1-205ENST00000555955 SRPK2P78362 688 aaKnown RBP17.47■□□□□ 0.39
SIX1-205ENST00000555955 TPD52L1Q16890 204 aaPredicted RBP17.47■□□□□ 0.39
SIX1-205ENST00000555955 SCAF11Q99590 1463 aaKnown RBP17.47■□□□□ 0.39
SIX1-205ENST00000555955 RICTORQ6R327 1708 aa17.46■□□□□ 0.39
SIX1-205ENST00000555955 IQGAP1P46940 1657 aa17.46■□□□□ 0.39
SIX1-205ENST00000555955 NOP2P46087 812 aaKnown RBP17.46■□□□□ 0.39
SIX1-205ENST00000555955 MTHFSP49914 203 aa17.46■□□□□ 0.39
SIX1-205ENST00000555955 GYS2P54840 703 aa17.46■□□□□ 0.39
SIX1-205ENST00000555955 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.46■□□□□ 0.39
SIX1-205ENST00000555955 REC8O95072 547 aa17.46■□□□□ 0.39
SIX1-205ENST00000555955 NOL8Q76FK4 1167 aaKnown RBP17.46■□□□□ 0.39
SIX1-205ENST00000555955 ZFYVE16Q7Z3T8 1539 aa17.46■□□□□ 0.38
SIX1-205ENST00000555955 GTF2A1P52655 376 aaPredicted RBP17.45■□□□□ 0.38
SIX1-205ENST00000555955 NCBP3Q53F19 620 aaKnown RBP17.45■□□□□ 0.38
SIX1-205ENST00000555955 CEP135Q66GS9 1140 aa17.45■□□□□ 0.38
SIX1-205ENST00000555955 DHX16O60231 1041 aaKnown RBP17.45■□□□□ 0.38
SIX1-205ENST00000555955 HNRNPMP52272 730 aaKnown RBP eCLIP17.45■□□□□ 0.38
SIX1-205ENST00000555955 ELF2Q15723 593 aa17.45■□□□□ 0.38
SIX1-205ENST00000555955 CFAP53Q96M91 514 aa17.45■□□□□ 0.38
SIX1-205ENST00000555955 FUCA2Q9BTY2 467 aa17.45■□□□□ 0.38
SIX1-205ENST00000555955 ABCC11Q96J66 1382 aa17.45■□□□□ 0.38
SIX1-205ENST00000555955 ADGRL1O94910 1474 aa17.45■□□□□ 0.38
SIX1-205ENST00000555955 REREQ9P2R6 1566 aa17.45■□□□□ 0.38
SIX1-205ENST00000555955 CUL4AQ13619 759 aa17.44■□□□□ 0.38
SIX1-205ENST00000555955 DRC7Q8IY82 874 aa17.44■□□□□ 0.38
SIX1-205ENST00000555955 GTF3C6Q969F1 213 aa17.44■□□□□ 0.38
SIX1-205ENST00000555955 TCHHQ07283 1943 aa17.44■□□□□ 0.38
SIX1-205ENST00000555955 SPAG9O60271 1321 aaKnown RBP17.44■□□□□ 0.38
SIX1-205ENST00000555955 BMS1Q14692 1282 aaKnown RBP17.44■□□□□ 0.38
SIX1-205ENST00000555955 ZNF446Q9NWS9 450 aa17.44■□□□□ 0.38
SIX1-205ENST00000555955 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.44■□□□□ 0.38
SIX1-205ENST00000555955 KDM5AP29375 1690 aaKnown RBP17.44■□□□□ 0.38
SIX1-205ENST00000555955 MCM2P49736 904 aa17.43■□□□□ 0.38
SIX1-205ENST00000555955 C16orf71Q8IYS4 520 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms