RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 CASC1Q6TDU7 716 aa12.64□□□□□ -0.39
EFCAB11-208ENST00000555872 HSP90AB4PQ58FF6 505 aa12.64□□□□□ -0.39
EFCAB11-208ENST00000555872 RAB3GAP1Q15042 981 aa12.63□□□□□ -0.39
EFCAB11-208ENST00000555872 HS1BP3Q53T59 392 aa12.63□□□□□ -0.39
EFCAB11-208ENST00000555872 SASS6Q6UVJ0 657 aa12.63□□□□□ -0.39
EFCAB11-208ENST00000555872 EFCC1Q9HA90 598 aa12.63□□□□□ -0.39
EFCAB11-208ENST00000555872 DDX49Q9Y6V7 483 aaKnown RBP12.63□□□□□ -0.39
EFCAB11-208ENST00000555872 HSP90AB1P08238 724 aaKnown RBP12.63□□□□□ -0.39
EFCAB11-208ENST00000555872 CSPP1Q1MSJ5 1256 aa12.63□□□□□ -0.39
EFCAB11-208ENST00000555872 KIF1BO60333 1816 aa12.63□□□□□ -0.39
EFCAB11-208ENST00000555872 TULP2O00295 520 aa12.62□□□□□ -0.39
EFCAB11-208ENST00000555872 APAF1O14727 1248 aa12.62□□□□□ -0.39
EFCAB11-208ENST00000555872 POLD1P28340 1107 aa12.62□□□□□ -0.39
EFCAB11-208ENST00000555872 ARHGAP31Q2M1Z3 1444 aa12.62□□□□□ -0.39
EFCAB11-208ENST00000555872 CLTCL1P53675 1640 aa12.62□□□□□ -0.39
EFCAB11-208ENST00000555872 ZBTB7CA1YPR0 619 aa12.62□□□□□ -0.39
EFCAB11-208ENST00000555872 TSHZ1Q6ZSZ6 1077 aa12.61□□□□□ -0.39
EFCAB11-208ENST00000555872 ZKSCAN5Q9Y2L8 839 aa12.61□□□□□ -0.39
EFCAB11-208ENST00000555872 NCOA3Q9Y6Q9 1424 aa12.61□□□□□ -0.39
EFCAB11-208ENST00000555872 CPS1P31327 1500 aa12.61□□□□□ -0.39
EFCAB11-208ENST00000555872 PPP2R1AP30153 589 aa12.61□□□□□ -0.39
EFCAB11-208ENST00000555872 SMC5Q8IY18 1101 aa12.61□□□□□ -0.39
EFCAB11-208ENST00000555872 PIK3R5Q8WYR1 880 aa12.61□□□□□ -0.39
EFCAB11-208ENST00000555872 JARID2Q92833 1246 aaPredicted RBP12.61□□□□□ -0.39
EFCAB11-208ENST00000555872 NCAPGQ9BPX3 1015 aa12.61□□□□□ -0.39
EFCAB11-208ENST00000555872 SMC4Q9NTJ3 1288 aa12.61□□□□□ -0.39
EFCAB11-208ENST00000555872 CIZ1Q9ULV3 898 aaPredicted RBP12.61□□□□□ -0.39
EFCAB11-208ENST00000555872 GOLGA6L22H0YM25 854 aa12.6□□□□□ -0.39
EFCAB11-208ENST00000555872 SSR1P43307 286 aaKnown RBP12.6□□□□□ -0.39
EFCAB11-208ENST00000555872 ZMYM3Q14202 1370 aa12.6□□□□□ -0.39
EFCAB11-208ENST00000555872 DNAJC21Q5F1R6 531 aaKnown RBP12.6□□□□□ -0.39
EFCAB11-208ENST00000555872 ZNF771Q7L3S4 317 aaPredicted RBP12.6□□□□□ -0.39
EFCAB11-208ENST00000555872 TSC1Q92574 1164 aa12.6□□□□□ -0.39
EFCAB11-208ENST00000555872 KLHL40Q2TBA0 621 aa12.59□□□□□ -0.39
EFCAB11-208ENST00000555872 SSFA2P28290 1259 aa12.59□□□□□ -0.39
EFCAB11-208ENST00000555872 MKRN4PQ13434 485 aaPredicted RBP12.59□□□□□ -0.39
EFCAB11-208ENST00000555872 RWDD1Q9H446 243 aaPredicted RBP12.59□□□□□ -0.39
EFCAB11-208ENST00000555872 TNNQ9UQP3 1299 aa12.59□□□□□ -0.39
EFCAB11-208ENST00000555872 CDK12Q9NYV4 1490 aaPredicted RBP12.58□□□□□ -0.4
EFCAB11-208ENST00000555872 PDLIM2Q96JY6 352 aa12.58□□□□□ -0.4
EFCAB11-208ENST00000555872 TIGD1Q96MW7 591 aa12.58□□□□□ -0.4
EFCAB11-208ENST00000555872 RBSNQ9H1K0 784 aa12.58□□□□□ -0.4
EFCAB11-208ENST00000555872 NPATQ14207 1427 aa12.58□□□□□ -0.4
EFCAB11-208ENST00000555872 SIGLEC1Q9BZZ2 1709 aa12.58□□□□□ -0.4
EFCAB11-208ENST00000555872 PIK3C2BO00750 1634 aa12.58□□□□□ -0.4
EFCAB11-208ENST00000555872 LAMC1P11047 1609 aa12.58□□□□□ -0.4
EFCAB11-208ENST00000555872 SPDYE4A6NLX3 237 aa12.58□□□□□ -0.4
EFCAB11-208ENST00000555872 IPO8O15397 1037 aaKnown RBP12.58□□□□□ -0.4
EFCAB11-208ENST00000555872 ZKSCAN8Q15776 578 aaPredicted RBP12.58□□□□□ -0.4
EFCAB11-208ENST00000555872 ATP2B3Q16720 1220 aa12.58□□□□□ -0.4
EFCAB11-208ENST00000555872 U3KPZ7 1027 aaPredicted RBP12.58□□□□□ -0.4
EFCAB11-208ENST00000555872 IFT172Q9UG01 1749 aa12.57□□□□□ -0.4
EFCAB11-208ENST00000555872 TRPM1Q7Z4N2 1603 aa12.57□□□□□ -0.4
EFCAB11-208ENST00000555872 IBTKQ9P2D0 1353 aaPredicted RBP12.57□□□□□ -0.4
EFCAB11-208ENST00000555872 RLBP1P12271 317 aa12.57□□□□□ -0.4
EFCAB11-208ENST00000555872 CAVIN1Q6NZI2 390 aaKnown RBP12.57□□□□□ -0.4
EFCAB11-208ENST00000555872 SNX21Q969T3 373 aa12.57□□□□□ -0.4
EFCAB11-208ENST00000555872 NINLQ9Y2I6 1382 aa12.56□□□□□ -0.4
EFCAB11-208ENST00000555872 NOS1P29475 1434 aa12.56□□□□□ -0.4
EFCAB11-208ENST00000555872 GTF2A1P52655 376 aaPredicted RBP12.56□□□□□ -0.4
EFCAB11-208ENST00000555872 ZNF445P59923 1031 aa12.56□□□□□ -0.4
EFCAB11-208ENST00000555872 GGT6Q6P531 493 aa12.56□□□□□ -0.4
EFCAB11-208ENST00000555872 EXOC8Q8IYI6 725 aa12.56□□□□□ -0.4
EFCAB11-208ENST00000555872 TNNT1P13805 278 aa12.55□□□□□ -0.4
EFCAB11-208ENST00000555872 ZSCAN23Q3MJ62 389 aa12.55□□□□□ -0.4
EFCAB11-208ENST00000555872 FOXD4L5Q5VV16 416 aaPredicted RBP12.55□□□□□ -0.4
EFCAB11-208ENST00000555872 FOXD4L4Q8WXT5 416 aaPredicted RBP12.55□□□□□ -0.4
EFCAB11-208ENST00000555872 MCM5P33992 734 aa12.55□□□□□ -0.4
EFCAB11-208ENST00000555872 MTA1Q13330 715 aa12.55□□□□□ -0.4
EFCAB11-208ENST00000555872 ZNF710Q8N1W2 664 aa12.55□□□□□ -0.4
EFCAB11-208ENST00000555872 BCL2L13Q9BXK5 485 aa12.55□□□□□ -0.4
EFCAB11-208ENST00000555872 TSPYL1Q9H0U9 437 aa12.55□□□□□ -0.4
EFCAB11-208ENST00000555872 KNSTRNQ9Y448 316 aa12.55□□□□□ -0.4
EFCAB11-208ENST00000555872 MRVI1Q9Y6F6 885 aa12.55□□□□□ -0.4
EFCAB11-208ENST00000555872 KIAA1210Q9ULL0 1709 aa12.55□□□□□ -0.4
EFCAB11-208ENST00000555872 PRAG1Q86YV5 1406 aa12.55□□□□□ -0.4
EFCAB11-208ENST00000555872 BAG4O95429 457 aaKnown RBP12.54□□□□□ -0.4
EFCAB11-208ENST00000555872 PRIM1P49642 420 aaKnown RBP12.54□□□□□ -0.4
EFCAB11-208ENST00000555872 MYRIPQ8NFW9 859 aa12.54□□□□□ -0.4
EFCAB11-208ENST00000555872 TESK2Q96S53 571 aa12.54□□□□□ -0.4
EFCAB11-208ENST00000555872 ADGRB3O60242 1522 aa12.54□□□□□ -0.4
EFCAB11-208ENST00000555872 KIF16BQ96L93 1317 aa12.54□□□□□ -0.4
EFCAB11-208ENST00000555872 CFAP65Q6ZU64 1925 aaKnown RBP12.54□□□□□ -0.4
EFCAB11-208ENST00000555872 FAM177BA6PVY3 158 aa12.53□□□□□ -0.4
EFCAB11-208ENST00000555872 CD2BP2O95400 341 aaKnown RBP12.53□□□□□ -0.4
EFCAB11-208ENST00000555872 RBM25P49756 843 aaKnown RBP12.53□□□□□ -0.4
EFCAB11-208ENST00000555872 ANKRD23Q86SG2 305 aa12.53□□□□□ -0.4
EFCAB11-208ENST00000555872 ZC3H12AQ5D1E8 599 aaKnown RBP12.53□□□□□ -0.4
EFCAB11-208ENST00000555872 MCTP1Q6DN14 999 aa12.53□□□□□ -0.4
EFCAB11-208ENST00000555872 BSDC1Q9NW68 430 aaPredicted RBP12.53□□□□□ -0.4
EFCAB11-208ENST00000555872 CCDC39Q9UFE4 941 aa12.53□□□□□ -0.4
EFCAB11-208ENST00000555872 MROH2AA6NES4 1674 aa12.53□□□□□ -0.4
EFCAB11-208ENST00000555872 CLTCQ00610 1675 aaKnown RBP12.53□□□□□ -0.4
EFCAB11-208ENST00000555872 SYNMO15061 1565 aa12.53□□□□□ -0.4
EFCAB11-208ENST00000555872 MPHOSPH10O00566 681 aaKnown RBP12.53□□□□□ -0.4
EFCAB11-208ENST00000555872 TMF1P82094 1093 aa12.52□□□□□ -0.41
EFCAB11-208ENST00000555872 MYOM2P54296 1465 aa12.52□□□□□ -0.41
EFCAB11-208ENST00000555872 ARHGEF1Q92888 912 aaKnown RBP12.52□□□□□ -0.41
EFCAB11-208ENST00000555872 DONSONQ9NYP3 566 aa12.52□□□□□ -0.41
EFCAB11-208ENST00000555872 NOP2P46087 812 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms