RNA–Protein interactions for RNA: ENST00000555752.1

SUPT16H-203, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 888 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-203ENST00000555752 IP6K1Q92551 441 aa27.03■■□□□ 1.92
SUPT16H-203ENST00000555752 LY75O60449 1722 aa27.02■■□□□ 1.92
SUPT16H-203ENST00000555752 ANKRD36BQ8N2N9 1353 aa27.01■■□□□ 1.91
SUPT16H-203ENST00000555752 YBX3P16989 372 aaKnown RBP eCLIP27.01■■□□□ 1.91
SUPT16H-203ENST00000555752 FAM208AQ9UK61 1670 aaKnown RBP27.01■■□□□ 1.91
SUPT16H-203ENST00000555752 RGPD2P0DJD1 1756 aa27■■□□□ 1.91
SUPT16H-203ENST00000555752 FBLN1P23142 703 aa26.99■■□□□ 1.91
SUPT16H-203ENST00000555752 CARD11Q9BXL7 1154 aa26.98■■□□□ 1.91
SUPT16H-203ENST00000555752 MEGF6O75095 1541 aa26.96■■□□□ 1.91
SUPT16H-203ENST00000555752 MAP3K19Q56UN5 1328 aa26.96■■□□□ 1.91
SUPT16H-203ENST00000555752 MSH5O43196 834 aa26.96■■□□□ 1.91
SUPT16H-203ENST00000555752 COL23A1Q86Y22 540 aaPredicted RBP26.96■■□□□ 1.91
SUPT16H-203ENST00000555752 TERF2IPQ9NYB0 399 aa26.96■■□□□ 1.91
SUPT16H-203ENST00000555752 CCNL1Q9UK58 526 aaPredicted RBP26.96■■□□□ 1.91
SUPT16H-203ENST00000555752 MSL1Q68DK7 614 aa26.95■■□□□ 1.9
SUPT16H-203ENST00000555752 CEP350Q5VT06 3117 aa26.94■■□□□ 1.9
SUPT16H-203ENST00000555752 HOXC9P31274 260 aa26.94■■□□□ 1.9
SUPT16H-203ENST00000555752 ZCRB1Q8TBF4 217 aaKnown RBP26.94■■□□□ 1.9
SUPT16H-203ENST00000555752 AMPHP49418 695 aa26.9■■□□□ 1.9
SUPT16H-203ENST00000555752 IFFO2Q5TF58 517 aa26.9■■□□□ 1.9
SUPT16H-203ENST00000555752 GRIN3BO60391 1043 aa26.89■■□□□ 1.9
SUPT16H-203ENST00000555752 USP47Q96K76 1375 aa26.88■■□□□ 1.89
SUPT16H-203ENST00000555752 USHBP1Q8N6Y0 703 aa26.88■■□□□ 1.89
SUPT16H-203ENST00000555752 COG3Q96JB2 828 aa26.88■■□□□ 1.89
SUPT16H-203ENST00000555752 ATP10DQ9P241 1426 aa26.88■■□□□ 1.89
SUPT16H-203ENST00000555752 NBPF6Q5VWK0 638 aa26.86■■□□□ 1.89
SUPT16H-203ENST00000555752 NBPF4Q96M43 638 aa26.86■■□□□ 1.89
SUPT16H-203ENST00000555752 C5P01031 1676 aa26.85■■□□□ 1.89
SUPT16H-203ENST00000555752 RRS1Q15050 365 aaKnown RBP26.83■■□□□ 1.89
SUPT16H-203ENST00000555752 PUS7Q96PZ0 661 aaKnown RBP26.83■■□□□ 1.89
SUPT16H-203ENST00000555752 ZNF526Q8TF50 670 aaPredicted RBP26.8■■□□□ 1.88
SUPT16H-203ENST00000555752 TESK2Q96S53 571 aa26.8■■□□□ 1.88
SUPT16H-203ENST00000555752 TAF1LQ8IZX4 1826 aa26.8■■□□□ 1.88
SUPT16H-203ENST00000555752 AMIGO3Q86WK7 504 aa26.79■■□□□ 1.88
SUPT16H-203ENST00000555752 WWC3Q9ULE0 1092 aa26.79■■□□□ 1.88
SUPT16H-203ENST00000555752 SMIM5Q71RC9 77 aa26.78■■□□□ 1.88
SUPT16H-203ENST00000555752 CD2APQ9Y5K6 639 aa26.78■■□□□ 1.88
SUPT16H-203ENST00000555752 RTL1A6NKG5 1358 aa26.77■■□□□ 1.88
SUPT16H-203ENST00000555752 PALLDQ8WX93 1383 aa26.77■■□□□ 1.88
SUPT16H-203ENST00000555752 RAPGEF4Q8WZA2 1011 aa26.77■■□□□ 1.88
SUPT16H-203ENST00000555752 GPBP1L1Q9HC44 474 aaPredicted RBP26.77■■□□□ 1.88
SUPT16H-203ENST00000555752 GGNBP2Q9H3C7 697 aa26.76■■□□□ 1.87
SUPT16H-203ENST00000555752 ADCY9O60503 1353 aa26.75■■□□□ 1.87
SUPT16H-203ENST00000555752 ST20-MTHFSA0A0A6YYL1 179 aa26.75■■□□□ 1.87
SUPT16H-203ENST00000555752 MPRIPQ6WCQ1 1025 aa26.75■■□□□ 1.87
SUPT16H-203ENST00000555752 TOGARAM1Q9Y4F4 1720 aa26.75■■□□□ 1.87
SUPT16H-203ENST00000555752 CGNL1Q0VF96 1302 aa26.74■■□□□ 1.87
SUPT16H-203ENST00000555752 TATP17735 454 aaPredicted RBP26.74■■□□□ 1.87
SUPT16H-203ENST00000555752 C4BP0C0L5 1744 aa26.73■■□□□ 1.87
SUPT16H-203ENST00000555752 FYB1O15117 783 aa26.73■■□□□ 1.87
SUPT16H-203ENST00000555752 HSP90AB2PQ58FF8 381 aa26.73■■□□□ 1.87
SUPT16H-203ENST00000555752 PCDH11XQ9BZA7 1347 aa26.71■■□□□ 1.87
SUPT16H-203ENST00000555752 PCDH11YQ9BZA8 1340 aa26.71■■□□□ 1.87
SUPT16H-203ENST00000555752 CYP27B1O15528 508 aa26.71■■□□□ 1.87
SUPT16H-203ENST00000555752 PHF14O94880 888 aa26.71■■□□□ 1.87
SUPT16H-203ENST00000555752 FLAD1Q8NFF5 587 aa26.71■■□□□ 1.87
SUPT16H-203ENST00000555752 ITGB4P16144 1822 aa26.71■■□□□ 1.87
SUPT16H-203ENST00000555752 SMG6Q86US8 1419 aaKnown RBP26.71■■□□□ 1.87
SUPT16H-203ENST00000555752 TONSLQ96HA7 1378 aa26.7■■□□□ 1.86
SUPT16H-203ENST00000555752 IGSF1Q8N6C5 1336 aa26.69■■□□□ 1.86
SUPT16H-203ENST00000555752 HSPA6P17066 643 aa26.69■■□□□ 1.86
SUPT16H-203ENST00000555752 UBR3Q6ZT12 1888 aa26.69■■□□□ 1.86
SUPT16H-203ENST00000555752 AK7Q96M32 723 aa26.69■■□□□ 1.86
SUPT16H-203ENST00000555752 INSRP06213 1382 aa26.67■■□□□ 1.86
SUPT16H-203ENST00000555752 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.66■■□□□ 1.86
SUPT16H-203ENST00000555752 PIGBQ92521 554 aa26.65■■□□□ 1.86
SUPT16H-203ENST00000555752 PKD1L3Q7Z443 1732 aa26.62■■□□□ 1.85
SUPT16H-203ENST00000555752 FLT4P35916 1363 aa26.62■■□□□ 1.85
SUPT16H-203ENST00000555752 LINC00116Q8NCU8 138 aa26.62■■□□□ 1.85
SUPT16H-203ENST00000555752 SMARCC1Q92922 1105 aaPredicted RBP26.62■■□□□ 1.85
SUPT16H-203ENST00000555752 MAP2P11137 1827 aaKnown RBP26.62■■□□□ 1.85
SUPT16H-203ENST00000555752 KIF20BQ96Q89 1820 aa26.62■■□□□ 1.85
SUPT16H-203ENST00000555752 KIF3CO14782 793 aa26.6■■□□□ 1.85
SUPT16H-203ENST00000555752 EMILIN1Q9Y6C2 1016 aa26.59■■□□□ 1.85
SUPT16H-203ENST00000555752 HMGB2P26583 209 aaKnown RBP26.58■■□□□ 1.85
SUPT16H-203ENST00000555752 LOC102724428A0A0B4J2F2 783 aa26.57■■□□□ 1.84
SUPT16H-203ENST00000555752 SIK1P57059 783 aa26.57■■□□□ 1.84
SUPT16H-203ENST00000555752 SSFA2P28290 1259 aa26.56■■□□□ 1.84
SUPT16H-203ENST00000555752 ITPK1Q13572 414 aa26.56■■□□□ 1.84
SUPT16H-203ENST00000555752 NKX1-1Q15270 411 aaPredicted RBP26.55■■□□□ 1.84
SUPT16H-203ENST00000555752 ASAP1Q9ULH1 1129 aa26.55■■□□□ 1.84
SUPT16H-203ENST00000555752 NSD3Q9BZ95 1437 aa26.55■■□□□ 1.84
SUPT16H-203ENST00000555752 GNPATO15228 680 aa26.54■■□□□ 1.84
SUPT16H-203ENST00000555752 KIF24Q5T7B8 1368 aa26.54■■□□□ 1.84
SUPT16H-203ENST00000555752 TMF1P82094 1093 aa26.53■■□□□ 1.84
SUPT16H-203ENST00000555752 CARD14Q9BXL6 1004 aa26.53■■□□□ 1.84
SUPT16H-203ENST00000555752 NCAPD2Q15021 1401 aa26.53■■□□□ 1.84
SUPT16H-203ENST00000555752 CICQ96RK0 1608 aaPredicted RBP26.53■■□□□ 1.84
SUPT16H-203ENST00000555752 PPM1GO15355 546 aaPredicted RBP26.52■■□□□ 1.84
SUPT16H-203ENST00000555752 SLC24A1O60721 1099 aa26.52■■□□□ 1.84
SUPT16H-203ENST00000555752 KIAA1551Q9HCM1 1747 aa26.52■■□□□ 1.84
SUPT16H-203ENST00000555752 N4BP2Q86UW6 1770 aaPredicted RBP26.51■■□□□ 1.83
SUPT16H-203ENST00000555752 PXDNLA1KZ92 1463 aa26.51■■□□□ 1.83
SUPT16H-203ENST00000555752 MMP10P09238 476 aa26.51■■□□□ 1.83
SUPT16H-203ENST00000555752 ATP6V1AP38606 617 aa26.5■■□□□ 1.83
SUPT16H-203ENST00000555752 TMOD3Q9NYL9 352 aa26.5■■□□□ 1.83
SUPT16H-203ENST00000555752 SPG7Q9UQ90 795 aa26.5■■□□□ 1.83
SUPT16H-203ENST00000555752 KIF13BQ9NQT8 1826 aa26.49■■□□□ 1.83
SUPT16H-203ENST00000555752 EYA1Q99502 592 aa26.48■■□□□ 1.83
SUPT16H-203ENST00000555752 A0A0G2JLW4 131 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms