RNA–Protein interactions for RNA: ENST00000555740.5

PCNX4-210, Transcript of pecanex 4, humanhuman

TSL 2

Gene PCNX4, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-210ENST00000555740 RGPD2P0DJD1 1756 aa10.41□□□□□ -0.74
PCNX4-210ENST00000555740 PLEKHG2Q9H7P9 1386 aa10.41□□□□□ -0.74
PCNX4-210ENST00000555740 ZNF467Q7Z7K2 595 aaPredicted RBP10.41□□□□□ -0.74
PCNX4-210ENST00000555740 IFNL1Q8IU54 200 aa10.41□□□□□ -0.74
PCNX4-210ENST00000555740 EMILIN1Q9Y6C2 1016 aa10.41□□□□□ -0.74
PCNX4-210ENST00000555740 CNGB1Q14028 1251 aaPredicted RBP10.41□□□□□ -0.74
PCNX4-210ENST00000555740 TNNT2P45379 298 aaPredicted RBP10.4□□□□□ -0.74
PCNX4-210ENST00000555740 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.4□□□□□ -0.74
PCNX4-210ENST00000555740 ARHGEF25Q86VW2 580 aa10.4□□□□□ -0.75
PCNX4-210ENST00000555740 FARP1Q9Y4F1 1045 aaPredicted RBP10.4□□□□□ -0.75
PCNX4-210ENST00000555740 KDRP35968 1356 aa10.39□□□□□ -0.75
PCNX4-210ENST00000555740 GCP02774 474 aa10.39□□□□□ -0.75
PCNX4-210ENST00000555740 IL13P35225 146 aa10.39□□□□□ -0.75
PCNX4-210ENST00000555740 FBXO22Q8NEZ5 403 aa10.39□□□□□ -0.75
PCNX4-210ENST00000555740 UBAP1LF5GYI3 381 aa10.39□□□□□ -0.75
PCNX4-210ENST00000555740 RRS1Q15050 365 aaKnown RBP10.39□□□□□ -0.75
PCNX4-210ENST00000555740 PKD1L3Q7Z443 1732 aa10.38□□□□□ -0.75
PCNX4-210ENST00000555740 DIAPH1O60610 1272 aaKnown RBP10.38□□□□□ -0.75
PCNX4-210ENST00000555740 HOXC9P31274 260 aa10.38□□□□□ -0.75
PCNX4-210ENST00000555740 NEUROD2Q15784 382 aa10.38□□□□□ -0.75
PCNX4-210ENST00000555740 IP6K1Q92551 441 aa10.38□□□□□ -0.75
PCNX4-210ENST00000555740 LRRC59Q96AG4 307 aaKnown RBP10.38□□□□□ -0.75
PCNX4-210ENST00000555740 PARP4Q9UKK3 1724 aaKnown RBP10.38□□□□□ -0.75
PCNX4-210ENST00000555740 WDR43Q15061 677 aaKnown RBP eCLIP10.38□□□□□ -0.75
PCNX4-210ENST00000555740 LRRC37A3O60309 1634 aa10.38□□□□□ -0.75
PCNX4-210ENST00000555740 DLG5Q8TDM6 1919 aa10.37□□□□□ -0.75
PCNX4-210ENST00000555740 NUTM2GQ5VZR2 741 aa10.37□□□□□ -0.75
PCNX4-210ENST00000555740 IGSF1Q8N6C5 1336 aa10.37□□□□□ -0.75
PCNX4-210ENST00000555740 NUDCQ9Y266 331 aa10.37□□□□□ -0.75
PCNX4-210ENST00000555740 COL5A2P05997 1499 aaPredicted RBP10.36□□□□□ -0.75
PCNX4-210ENST00000555740 JCADQ9P266 1359 aa10.36□□□□□ -0.75
PCNX4-210ENST00000555740 EIF4A2Q14240 407 aaKnown RBP10.36□□□□□ -0.75
PCNX4-210ENST00000555740 ADAMTS7Q9UKP4 1686 aa10.36□□□□□ -0.75
PCNX4-210ENST00000555740 KIAA0232Q92628 1395 aa10.36□□□□□ -0.75
PCNX4-210ENST00000555740 FBLN1P23142 703 aa10.36□□□□□ -0.75
PCNX4-210ENST00000555740 E2F4Q16254 413 aa10.36□□□□□ -0.75
PCNX4-210ENST00000555740 ZBED9Q6R2W3 1325 aa10.35□□□□□ -0.75
PCNX4-210ENST00000555740 MAP3K13O43283 966 aa10.35□□□□□ -0.75
PCNX4-210ENST00000555740 NGEFQ8N5V2 710 aa10.35□□□□□ -0.75
PCNX4-210ENST00000555740 ADAMTS8Q9UP79 889 aa10.35□□□□□ -0.75
PCNX4-210ENST00000555740 FAM9BQ8IZU0 186 aa10.35□□□□□ -0.75
PCNX4-210ENST00000555740 AMPHP49418 695 aa10.34□□□□□ -0.75
PCNX4-210ENST00000555740 RSPH6AQ9H0K4 717 aa10.34□□□□□ -0.75
PCNX4-210ENST00000555740 SHANK3Q9BYB0 1731 aa10.34□□□□□ -0.75
PCNX4-210ENST00000555740 HSP90AB2PQ58FF8 381 aa10.34□□□□□ -0.75
PCNX4-210ENST00000555740 PLEKHF1Q96S99 279 aa10.34□□□□□ -0.75
PCNX4-210ENST00000555740 VIRMAQ69YN4 1812 aaKnown RBP10.34□□□□□ -0.75
PCNX4-210ENST00000555740 FCHSD2O94868 740 aa10.33□□□□□ -0.76
PCNX4-210ENST00000555740 ERBB3P21860 1342 aa10.33□□□□□ -0.76
PCNX4-210ENST00000555740 RUNDC1Q96C34 613 aa10.33□□□□□ -0.76
PCNX4-210ENST00000555740 PNNQ9H307 717 aaKnown RBP10.33□□□□□ -0.76
PCNX4-210ENST00000555740 LRP6O75581 1613 aa10.32□□□□□ -0.76
PCNX4-210ENST00000555740 SLIT2O94813 1529 aa10.32□□□□□ -0.76
PCNX4-210ENST00000555740 TESPA1A2RU30 521 aaPredicted RBP10.32□□□□□ -0.76
PCNX4-210ENST00000555740 ARHGEF1Q92888 912 aaKnown RBP10.32□□□□□ -0.76
PCNX4-210ENST00000555740 SPATA31A6Q5VVP1 1343 aa10.32□□□□□ -0.76
PCNX4-210ENST00000555740 ZNF521Q96K83 1311 aa10.32□□□□□ -0.76
PCNX4-210ENST00000555740 SOX12O15370 315 aa10.31□□□□□ -0.76
PCNX4-210ENST00000555740 U2AF1L5P0DN76 240 aaPredicted RBP10.31□□□□□ -0.76
PCNX4-210ENST00000555740 PIP4K2BP78356 416 aa10.31□□□□□ -0.76
PCNX4-210ENST00000555740 U2AF1Q01081 240 aaKnown RBP eCLIP10.31□□□□□ -0.76
PCNX4-210ENST00000555740 MS4A4AQ96JQ5 239 aa10.31□□□□□ -0.76
PCNX4-210ENST00000555740 PPM1GO15355 546 aaPredicted RBP10.31□□□□□ -0.76
PCNX4-210ENST00000555740 CABLES1Q8TDN4 633 aa10.31□□□□□ -0.76
PCNX4-210ENST00000555740 LARP6Q9BRS8 491 aaKnown RBP10.31□□□□□ -0.76
PCNX4-210ENST00000555740 SIPA1L3O60292 1781 aaPredicted RBP10.3□□□□□ -0.76
PCNX4-210ENST00000555740 PRKAR2AP13861 404 aaKnown RBP10.3□□□□□ -0.76
PCNX4-210ENST00000555740 CCDC27Q2M243 656 aa10.3□□□□□ -0.76
PCNX4-210ENST00000555740 OVOS2A0A0G2JMS6 1433 aa10.3□□□□□ -0.76
PCNX4-210ENST00000555740 U2SURPO15042 1029 aaKnown RBP10.3□□□□□ -0.76
PCNX4-210ENST00000555740 HNRNPUQ00839 825 aaKnown RBP eCLIP10.3□□□□□ -0.76
PCNX4-210ENST00000555740 EYA1Q99502 592 aa10.3□□□□□ -0.76
PCNX4-210ENST00000555740 GPBP1L1Q9HC44 474 aaPredicted RBP10.3□□□□□ -0.76
PCNX4-210ENST00000555740 ANKRD24Q8TF21 1146 aa10.29□□□□□ -0.76
PCNX4-210ENST00000555740 AXIN2Q9Y2T1 843 aa10.29□□□□□ -0.76
PCNX4-210ENST00000555740 WDR17Q8IZU2 1322 aa10.29□□□□□ -0.76
PCNX4-210ENST00000555740 ZC3H6P61129 1189 aaKnown RBP10.29□□□□□ -0.76
PCNX4-210ENST00000555740 PRDM11Q9NQV5 511 aa10.29□□□□□ -0.76
PCNX4-210ENST00000555740 DISP2A7MBM2 1401 aa10.28□□□□□ -0.76
PCNX4-210ENST00000555740 CRB1P82279 1406 aa10.28□□□□□ -0.76
PCNX4-210ENST00000555740 SCN11AQ9UI33 1791 aa10.28□□□□□ -0.76
PCNX4-210ENST00000555740 PRKAR2BP31323 418 aa10.28□□□□□ -0.76
PCNX4-210ENST00000555740 ZNF579Q8NAF0 562 aaKnown RBP10.28□□□□□ -0.76
PCNX4-210ENST00000555740 MEGF6O75095 1541 aa10.28□□□□□ -0.76
PCNX4-210ENST00000555740 MAPK8IP3Q9UPT6 1336 aa10.27□□□□□ -0.77
PCNX4-210ENST00000555740 THSD7AQ9UPZ6 1657 aa10.27□□□□□ -0.77
PCNX4-210ENST00000555740 MRC1P22897 1456 aa10.27□□□□□ -0.77
PCNX4-210ENST00000555740 PDE3BQ13370 1112 aa10.27□□□□□ -0.77
PCNX4-210ENST00000555740 AEBP1Q8IUX7 1158 aa10.27□□□□□ -0.77
PCNX4-210ENST00000555740 CCDC146Q8IYE0 955 aa10.27□□□□□ -0.77
PCNX4-210ENST00000555740 YTHDC1Q96MU7 727 aaKnown RBP10.27□□□□□ -0.77
PCNX4-210ENST00000555740 ARXQ96QS3 562 aa10.27□□□□□ -0.77
PCNX4-210ENST00000555740 NFE2L2Q16236 605 aa10.26□□□□□ -0.77
PCNX4-210ENST00000555740 SULT6B1Q6IMI4 303 aa10.26□□□□□ -0.77
PCNX4-210ENST00000555740 TCP11L2Q8N4U5 519 aa10.26□□□□□ -0.77
PCNX4-210ENST00000555740 KDM3BQ7LBC6 1761 aa10.26□□□□□ -0.77
PCNX4-210ENST00000555740 FAM83GA6ND36 823 aa10.26□□□□□ -0.77
PCNX4-210ENST00000555740 HSPA1LP34931 641 aa10.26□□□□□ -0.77
PCNX4-210ENST00000555740 NBPF6Q5VWK0 638 aa10.26□□□□□ -0.77
PCNX4-210ENST00000555740 NBPF4Q96M43 638 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms