RNA–Protein interactions for RNA: ENST00000555688.1

LINC00641-202, long intergenic non-protein coding RNA 641, humanhuman

TSL 1 (best) BASIC

Gene LINC00641, Length 1,763 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-202ENST00000555688 CEBPAP49715 358 aaPredicted RBP10.46□□□□□ -0.74
LINC00641-202ENST00000555688 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.46□□□□□ -0.74
LINC00641-202ENST00000555688 RBM46Q8TBY0 533 aaKnown RBP10.46□□□□□ -0.74
LINC00641-202ENST00000555688 PRAM1Q96QH2 718 aa10.46□□□□□ -0.74
LINC00641-202ENST00000555688 MDM2Q00987 491 aaPredicted RBP10.45□□□□□ -0.74
LINC00641-202ENST00000555688 SAFB2Q14151 953 aaKnown RBP eCLIP10.45□□□□□ -0.74
LINC00641-202ENST00000555688 FAM198AQ9UFP1 575 aa10.45□□□□□ -0.74
LINC00641-202ENST00000555688 INSRP06213 1382 aa10.45□□□□□ -0.74
LINC00641-202ENST00000555688 PLEKHG3A1L390 1219 aa10.44□□□□□ -0.74
LINC00641-202ENST00000555688 TMEM2Q9UHN6 1383 aa10.44□□□□□ -0.74
LINC00641-202ENST00000555688 DLC1Q96QB1 1528 aa10.44□□□□□ -0.74
LINC00641-202ENST00000555688 C3P01024 1663 aa10.44□□□□□ -0.74
LINC00641-202ENST00000555688 ABCC11Q96J66 1382 aa10.44□□□□□ -0.74
LINC00641-202ENST00000555688 MS4A1P11836 297 aa10.44□□□□□ -0.74
LINC00641-202ENST00000555688 TSKSQ9UJT2 592 aa10.44□□□□□ -0.74
LINC00641-202ENST00000555688 NLRP1Q9C000 1473 aa10.43□□□□□ -0.74
LINC00641-202ENST00000555688 METP08581 1390 aa10.43□□□□□ -0.74
LINC00641-202ENST00000555688 ONECUT3O60422 494 aaPredicted RBP10.43□□□□□ -0.74
LINC00641-202ENST00000555688 HDGFP51858 240 aaKnown RBP10.43□□□□□ -0.74
LINC00641-202ENST00000555688 ERICH6Q7L0X2 663 aa10.43□□□□□ -0.74
LINC00641-202ENST00000555688 NSD3Q9BZ95 1437 aa10.42□□□□□ -0.74
LINC00641-202ENST00000555688 ERBB3P21860 1342 aa10.42□□□□□ -0.74
LINC00641-202ENST00000555688 TRIM6-TRIM34B2RNG4 842 aa10.42□□□□□ -0.74
LINC00641-202ENST00000555688 ST18O60284 1047 aa10.42□□□□□ -0.74
LINC00641-202ENST00000555688 POGKQ9P215 609 aa10.42□□□□□ -0.74
LINC00641-202ENST00000555688 BLMP54132 1417 aaPredicted RBP10.42□□□□□ -0.74
LINC00641-202ENST00000555688 FER1L4A9Z1Z3 1794 aa10.42□□□□□ -0.74
LINC00641-202ENST00000555688 ANKRD36BQ8N2N9 1353 aa10.42□□□□□ -0.74
LINC00641-202ENST00000555688 SENP3-EIF4A1A0A087X0R7 540 aa10.42□□□□□ -0.74
LINC00641-202ENST00000555688 LTKP29376 864 aa10.42□□□□□ -0.74
LINC00641-202ENST00000555688 WAPLQ7Z5K2 1190 aa10.42□□□□□ -0.74
LINC00641-202ENST00000555688 KCNK17Q96T54 332 aa10.42□□□□□ -0.74
LINC00641-202ENST00000555688 SMG6Q86US8 1419 aaKnown RBP10.41□□□□□ -0.74
LINC00641-202ENST00000555688 PLEKHH1Q9ULM0 1364 aa10.41□□□□□ -0.74
LINC00641-202ENST00000555688 USP32Q8NFA0 1604 aa10.41□□□□□ -0.74
LINC00641-202ENST00000555688 SSTR3P32745 418 aaPredicted RBP10.41□□□□□ -0.74
LINC00641-202ENST00000555688 EYA1Q99502 592 aa10.41□□□□□ -0.74
LINC00641-202ENST00000555688 ADAMTS8Q9UP79 889 aa10.41□□□□□ -0.74
LINC00641-202ENST00000555688 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.4□□□□□ -0.74
LINC00641-202ENST00000555688 PACS2Q86VP3 889 aa10.4□□□□□ -0.74
LINC00641-202ENST00000555688 SIRT1Q96EB6 747 aa10.4□□□□□ -0.74
LINC00641-202ENST00000555688 CDK19Q9BWU1 502 aa10.4□□□□□ -0.74
LINC00641-202ENST00000555688 ADAMTS13Q76LX8 1427 aa10.4□□□□□ -0.74
LINC00641-202ENST00000555688 NINLQ9Y2I6 1382 aa10.4□□□□□ -0.75
LINC00641-202ENST00000555688 CD163L1Q9NR16 1453 aa10.39□□□□□ -0.75
LINC00641-202ENST00000555688 SRPK2P78362 688 aaKnown RBP10.39□□□□□ -0.75
LINC00641-202ENST00000555688 VARS2Q5ST30 1063 aaKnown RBP10.39□□□□□ -0.75
LINC00641-202ENST00000555688 GOPCQ9HD26 462 aa10.39□□□□□ -0.75
LINC00641-202ENST00000555688 FAM217BQ9NTX9 383 aaPredicted RBP10.39□□□□□ -0.75
LINC00641-202ENST00000555688 TECPR2O15040 1411 aa10.39□□□□□ -0.75
LINC00641-202ENST00000555688 ATAD2Q6PL18 1390 aa10.39□□□□□ -0.75
LINC00641-202ENST00000555688 NBPF26B4DH59 902 aa10.39□□□□□ -0.75
LINC00641-202ENST00000555688 NLRP7Q8WX94 980 aa10.39□□□□□ -0.75
LINC00641-202ENST00000555688 NUDCQ9Y266 331 aa10.39□□□□□ -0.75
LINC00641-202ENST00000555688 PLEKHG1Q9ULL1 1385 aa10.38□□□□□ -0.75
LINC00641-202ENST00000555688 MED14O60244 1454 aa10.38□□□□□ -0.75
LINC00641-202ENST00000555688 ARHGAP23Q9P227 1491 aa10.38□□□□□ -0.75
LINC00641-202ENST00000555688 ARHGAP33O14559 1287 aa10.38□□□□□ -0.75
LINC00641-202ENST00000555688 NUDT18Q6ZVK8 323 aa10.38□□□□□ -0.75
LINC00641-202ENST00000555688 TATDN2Q93075 761 aa10.38□□□□□ -0.75
LINC00641-202ENST00000555688 SLIT1O75093 1534 aa10.38□□□□□ -0.75
LINC00641-202ENST00000555688 A0A1W2PP64 1363 aa10.38□□□□□ -0.75
LINC00641-202ENST00000555688 CGNL1Q0VF96 1302 aa10.38□□□□□ -0.75
LINC00641-202ENST00000555688 KNDC1Q76NI1 1749 aa10.37□□□□□ -0.75
LINC00641-202ENST00000555688 FAM135BQ49AJ0 1406 aa10.37□□□□□ -0.75
LINC00641-202ENST00000555688 RCCD1A6NED2 376 aa10.37□□□□□ -0.75
LINC00641-202ENST00000555688 NEFLP07196 543 aa10.37□□□□□ -0.75
LINC00641-202ENST00000555688 MORC1Q86VD1 984 aa10.37□□□□□ -0.75
LINC00641-202ENST00000555688 TXNDC2Q86VQ3 553 aa10.37□□□□□ -0.75
LINC00641-202ENST00000555688 ZBED2Q9BTP6 218 aa10.37□□□□□ -0.75
LINC00641-202ENST00000555688 EMP3P54852 163 aa10.37□□□□□ -0.75
LINC00641-202ENST00000555688 PROX2Q3B8N5 592 aa10.37□□□□□ -0.75
LINC00641-202ENST00000555688 PNMA3Q9UL41 463 aa10.37□□□□□ -0.75
LINC00641-202ENST00000555688 POLR3AO14802 1390 aaPredicted RBP10.36□□□□□ -0.75
LINC00641-202ENST00000555688 C3orf80F5H4A9 247 aa10.36□□□□□ -0.75
LINC00641-202ENST00000555688 SLC4A5Q9BY07 1137 aa10.36□□□□□ -0.75
LINC00641-202ENST00000555688 CABP1Q9NZU7 370 aa10.36□□□□□ -0.75
LINC00641-202ENST00000555688 NSD2O96028 1365 aa10.36□□□□□ -0.75
LINC00641-202ENST00000555688 RNF123Q5XPI4 1314 aa10.35□□□□□ -0.75
LINC00641-202ENST00000555688 CPS1P31327 1500 aa10.35□□□□□ -0.75
LINC00641-202ENST00000555688 WASLO00401 505 aaPredicted RBP10.35□□□□□ -0.75
LINC00641-202ENST00000555688 PBX2P40425 430 aa10.35□□□□□ -0.75
LINC00641-202ENST00000555688 PSEN2P49810 448 aa10.35□□□□□ -0.75
LINC00641-202ENST00000555688 PDE3BQ13370 1112 aa10.35□□□□□ -0.75
LINC00641-202ENST00000555688 POTEEQ6S8J3 1075 aa10.35□□□□□ -0.75
LINC00641-202ENST00000555688 SALL2Q9Y467 1007 aaPredicted RBP10.35□□□□□ -0.75
LINC00641-202ENST00000555688 ROBO2Q9HCK4 1378 aa10.34□□□□□ -0.75
LINC00641-202ENST00000555688 DNAJB2P25686 324 aa10.34□□□□□ -0.75
LINC00641-202ENST00000555688 WDR43Q15061 677 aaKnown RBP eCLIP10.34□□□□□ -0.75
LINC00641-202ENST00000555688 ZNF687Q8N1G0 1237 aa10.34□□□□□ -0.75
LINC00641-202ENST00000555688 THEMISQ8N1K5 641 aaPredicted RBP10.34□□□□□ -0.75
LINC00641-202ENST00000555688 BEGAINQ9BUH8 593 aa10.34□□□□□ -0.75
LINC00641-202ENST00000555688 TERF2IPQ9NYB0 399 aa10.34□□□□□ -0.75
LINC00641-202ENST00000555688 PTPRUQ92729 1446 aa10.34□□□□□ -0.75
LINC00641-202ENST00000555688 FYB1O15117 783 aa10.34□□□□□ -0.75
LINC00641-202ENST00000555688 MARVELD3Q96A59 401 aa10.34□□□□□ -0.75
LINC00641-202ENST00000555688 EID1Q9Y6B2 187 aa10.34□□□□□ -0.75
LINC00641-202ENST00000555688 TNNT2P45379 298 aaPredicted RBP10.33□□□□□ -0.76
LINC00641-202ENST00000555688 IRX6P78412 446 aaPredicted RBP10.33□□□□□ -0.76
LINC00641-202ENST00000555688 SLC26A8Q96RN1 970 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms