RNA–Protein interactions for RNA: ENST00000555608.5

EFCAB11-207, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2

Gene EFCAB11, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-207ENST00000555608 DDX54Q8TDD1 881 aaKnown RBP20.5■□□□□ 0.87
EFCAB11-207ENST00000555608 TNNT2P45379 298 aaPredicted RBP20.48■□□□□ 0.87
EFCAB11-207ENST00000555608 ANO8Q9HCE9 1232 aaPredicted RBP20.48■□□□□ 0.87
EFCAB11-207ENST00000555608 NBPF14Q5TI25 921 aa20.47■□□□□ 0.87
EFCAB11-207ENST00000555608 PROM2Q8N271 834 aa20.46■□□□□ 0.87
EFCAB11-207ENST00000555608 PKD1L3Q7Z443 1732 aa20.46■□□□□ 0.87
EFCAB11-207ENST00000555608 KIF7Q2M1P5 1343 aa20.46■□□□□ 0.87
EFCAB11-207ENST00000555608 CASZ1Q86V15 1759 aa20.46■□□□□ 0.87
EFCAB11-207ENST00000555608 ZCRB1Q8TBF4 217 aaKnown RBP20.45■□□□□ 0.86
EFCAB11-207ENST00000555608 PAPPAQ13219 1627 aa20.45■□□□□ 0.86
EFCAB11-207ENST00000555608 TXNRD1Q16881 649 aa20.44■□□□□ 0.86
EFCAB11-207ENST00000555608 POLKQ9UBT6 870 aa20.44■□□□□ 0.86
EFCAB11-207ENST00000555608 RAPGEF4Q8WZA2 1011 aa20.43■□□□□ 0.86
EFCAB11-207ENST00000555608 TOGARAM1Q9Y4F4 1720 aa20.43■□□□□ 0.86
EFCAB11-207ENST00000555608 NCAPD2Q15021 1401 aa20.43■□□□□ 0.86
EFCAB11-207ENST00000555608 TATP17735 454 aaPredicted RBP20.42■□□□□ 0.86
EFCAB11-207ENST00000555608 WASHC2AQ641Q2 1341 aa20.42■□□□□ 0.86
EFCAB11-207ENST00000555608 NSD2O96028 1365 aa20.42■□□□□ 0.86
EFCAB11-207ENST00000555608 SYTL4Q96C24 671 aaPredicted RBP20.4■□□□□ 0.86
EFCAB11-207ENST00000555608 LY75O60449 1722 aa20.39■□□□□ 0.86
EFCAB11-207ENST00000555608 PRIM1P49642 420 aaKnown RBP20.38■□□□□ 0.85
EFCAB11-207ENST00000555608 ITGB4P16144 1822 aa20.37■□□□□ 0.85
EFCAB11-207ENST00000555608 PCDH11XQ9BZA7 1347 aa20.37■□□□□ 0.85
EFCAB11-207ENST00000555608 PCDH11YQ9BZA8 1340 aa20.37■□□□□ 0.85
EFCAB11-207ENST00000555608 EIF4A2Q14240 407 aaKnown RBP20.37■□□□□ 0.85
EFCAB11-207ENST00000555608 EYA1Q99502 592 aa20.37■□□□□ 0.85
EFCAB11-207ENST00000555608 KNSTRNQ9Y448 316 aa20.37■□□□□ 0.85
EFCAB11-207ENST00000555608 TUBGCP6Q96RT7 1819 aa20.37■□□□□ 0.85
EFCAB11-207ENST00000555608 MORC1Q86VD1 984 aa20.36■□□□□ 0.85
EFCAB11-207ENST00000555608 PDGFDQ9GZP0 370 aaPredicted RBP20.36■□□□□ 0.85
EFCAB11-207ENST00000555608 STK32BQ9NY57 414 aa20.35■□□□□ 0.85
EFCAB11-207ENST00000555608 LRRC4BQ9NT99 713 aa20.34■□□□□ 0.85
EFCAB11-207ENST00000555608 CYP27B1O15528 508 aa20.33■□□□□ 0.85
EFCAB11-207ENST00000555608 SLC15A2Q16348 729 aa20.33■□□□□ 0.85
EFCAB11-207ENST00000555608 AMER1Q5JTC6 1135 aaPredicted RBP20.33■□□□□ 0.85
EFCAB11-207ENST00000555608 KCNQ4P56696 695 aa20.32■□□□□ 0.84
EFCAB11-207ENST00000555608 ZNF827Q17R98 1081 aa20.32■□□□□ 0.84
EFCAB11-207ENST00000555608 QSER1Q2KHR3 1735 aa20.3■□□□□ 0.84
EFCAB11-207ENST00000555608 SPON1Q9HCB6 807 aa20.3■□□□□ 0.84
EFCAB11-207ENST00000555608 PPP1R1BQ9UD71 204 aaPredicted RBP20.3■□□□□ 0.84
EFCAB11-207ENST00000555608 IGSF1Q8N6C5 1336 aa20.29■□□□□ 0.84
EFCAB11-207ENST00000555608 C5P01031 1676 aa20.29■□□□□ 0.84
EFCAB11-207ENST00000555608 ZBTB7AO95365 584 aa20.29■□□□□ 0.84
EFCAB11-207ENST00000555608 CC2D1BQ5T0F9 858 aaKnown RBP20.28■□□□□ 0.84
EFCAB11-207ENST00000555608 SPG7Q9UQ90 795 aa20.28■□□□□ 0.84
EFCAB11-207ENST00000555608 CNGB1Q14028 1251 aaPredicted RBP20.27■□□□□ 0.84
EFCAB11-207ENST00000555608 TAF1LQ8IZX4 1826 aa20.27■□□□□ 0.84
EFCAB11-207ENST00000555608 PER1O15534 1290 aaPredicted RBP20.26■□□□□ 0.83
EFCAB11-207ENST00000555608 SLC27A3Q5K4L6 730 aa20.26■□□□□ 0.83
EFCAB11-207ENST00000555608 MPRIPQ6WCQ1 1025 aa20.25■□□□□ 0.83
EFCAB11-207ENST00000555608 AEBP1Q8IUX7 1158 aa20.25■□□□□ 0.83
EFCAB11-207ENST00000555608 CCNL1Q9UK58 526 aaPredicted RBP20.25■□□□□ 0.83
EFCAB11-207ENST00000555608 ATF5Q9Y2D1 282 aaPredicted RBP20.25■□□□□ 0.83
EFCAB11-207ENST00000555608 PALLDQ8WX93 1383 aa20.24■□□□□ 0.83
EFCAB11-207ENST00000555608 AKT1S1Q96B36 256 aa20.24■□□□□ 0.83
EFCAB11-207ENST00000555608 PHKG2P15735 406 aa20.23■□□□□ 0.83
EFCAB11-207ENST00000555608 NKX1-1Q15270 411 aaPredicted RBP20.22■□□□□ 0.83
EFCAB11-207ENST00000555608 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.22■□□□□ 0.83
EFCAB11-207ENST00000555608 IFNL2Q8IZJ0 200 aa20.21■□□□□ 0.83
EFCAB11-207ENST00000555608 IL13P35225 146 aa20.2■□□□□ 0.82
EFCAB11-207ENST00000555608 PTGER2P43116 358 aa20.2■□□□□ 0.82
EFCAB11-207ENST00000555608 MTHFSP49914 203 aa20.2■□□□□ 0.82
EFCAB11-207ENST00000555608 PIGBQ92521 554 aa20.2■□□□□ 0.82
EFCAB11-207ENST00000555608 PNPLA7Q6ZV29 1317 aa20.2■□□□□ 0.82
EFCAB11-207ENST00000555608 PLEKHG2Q9H7P9 1386 aa20.2■□□□□ 0.82
EFCAB11-207ENST00000555608 C4BP0C0L5 1744 aa20.19■□□□□ 0.82
EFCAB11-207ENST00000555608 MTFR1LQ9H019 292 aa20.19■□□□□ 0.82
EFCAB11-207ENST00000555608 SULT6B1Q6IMI4 303 aa20.18■□□□□ 0.82
EFCAB11-207ENST00000555608 TFCP2L1Q9NZI6 479 aa20.18■□□□□ 0.82
EFCAB11-207ENST00000555608 NPC1L1Q9UHC9 1359 aa20.18■□□□□ 0.82
EFCAB11-207ENST00000555608 VIRMAQ69YN4 1812 aaKnown RBP20.18■□□□□ 0.82
EFCAB11-207ENST00000555608 KDM6AO15550 1401 aaPredicted RBP20.18■□□□□ 0.82
EFCAB11-207ENST00000555608 COL24A1Q17RW2 1714 aa20.17■□□□□ 0.82
EFCAB11-207ENST00000555608 ZNF530Q6P9A1 599 aaPredicted RBP20.17■□□□□ 0.82
EFCAB11-207ENST00000555608 TMOD3Q9NYL9 352 aa20.17■□□□□ 0.82
EFCAB11-207ENST00000555608 KDRP35968 1356 aa20.17■□□□□ 0.82
EFCAB11-207ENST00000555608 COL3A1P02461 1466 aaPredicted RBP20.17■□□□□ 0.82
EFCAB11-207ENST00000555608 PLEKHO1Q53GL0 409 aaPredicted RBP20.16■□□□□ 0.82
EFCAB11-207ENST00000555608 SGIP1Q9BQI5 828 aa20.15■□□□□ 0.82
EFCAB11-207ENST00000555608 SCN11AQ9UI33 1791 aa20.15■□□□□ 0.82
EFCAB11-207ENST00000555608 UBR3Q6ZT12 1888 aa20.15■□□□□ 0.82
EFCAB11-207ENST00000555608 SMARCC1Q92922 1105 aaPredicted RBP20.14■□□□□ 0.81
EFCAB11-207ENST00000555608 HMOX1P09601 288 aa20.13■□□□□ 0.81
EFCAB11-207ENST00000555608 YY1P25490 414 aa20.13■□□□□ 0.81
EFCAB11-207ENST00000555608 ASAP1Q9ULH1 1129 aa20.13■□□□□ 0.81
EFCAB11-207ENST00000555608 AMOTQ4VCS5 1084 aa20.12■□□□□ 0.81
EFCAB11-207ENST00000555608 DCAF8L1A6NGE4 600 aa20.11■□□□□ 0.81
EFCAB11-207ENST00000555608 DIAPH1O60610 1272 aaKnown RBP20.11■□□□□ 0.81
EFCAB11-207ENST00000555608 MSH5O43196 834 aa20.1■□□□□ 0.81
EFCAB11-207ENST00000555608 HSP90AB1P08238 724 aaKnown RBP20.1■□□□□ 0.81
EFCAB11-207ENST00000555608 C1orf141Q5JVX7 400 aa20.1■□□□□ 0.81
EFCAB11-207ENST00000555608 COL23A1Q86Y22 540 aaPredicted RBP20.1■□□□□ 0.81
EFCAB11-207ENST00000555608 DCAF5Q96JK2 942 aa20.1■□□□□ 0.81
EFCAB11-207ENST00000555608 FHDC1Q9C0D6 1143 aaPredicted RBP20.1■□□□□ 0.81
EFCAB11-207ENST00000555608 ATG3Q9NT62 314 aa20.1■□□□□ 0.81
EFCAB11-207ENST00000555608 COL5A3P25940 1745 aaPredicted RBP20.1■□□□□ 0.81
EFCAB11-207ENST00000555608 LOC102724428A0A0B4J2F2 783 aa20.09■□□□□ 0.81
EFCAB11-207ENST00000555608 SIK1P57059 783 aa20.09■□□□□ 0.81
EFCAB11-207ENST00000555608 LINC00116Q8NCU8 138 aa20.09■□□□□ 0.81
EFCAB11-207ENST00000555608 SMIM5Q71RC9 77 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms