RNA–Protein interactions for RNA: ENST00000555370.5

IFT43-210, Transcript of intraflagellar transport 43, humanhuman

TSL 3

Gene IFT43, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-210ENST00000555370 SPATA31A7Q8IWB4 1347 aa15.4■□□□□ 0.06
IFT43-210ENST00000555370 RTL1A6NKG5 1358 aa15.39■□□□□ 0.05
IFT43-210ENST00000555370 ZNF526Q8TF50 670 aaPredicted RBP15.39■□□□□ 0.05
IFT43-210ENST00000555370 ARXQ96QS3 562 aa15.39■□□□□ 0.05
IFT43-210ENST00000555370 MAP3K19Q56UN5 1328 aa15.39■□□□□ 0.05
IFT43-210ENST00000555370 THSD7AQ9UPZ6 1657 aa15.38■□□□□ 0.05
IFT43-210ENST00000555370 SOX12O15370 315 aa15.38■□□□□ 0.05
IFT43-210ENST00000555370 KCNH5Q8NCM2 988 aa15.38■□□□□ 0.05
IFT43-210ENST00000555370 SGIP1Q9BQI5 828 aa15.38■□□□□ 0.05
IFT43-210ENST00000555370 ARHGEF10O15013 1369 aa15.37■□□□□ 0.05
IFT43-210ENST00000555370 DLG5Q8TDM6 1919 aa15.37■□□□□ 0.05
IFT43-210ENST00000555370 U2AF1L5P0DN76 240 aaPredicted RBP15.37■□□□□ 0.05
IFT43-210ENST00000555370 U2AF1Q01081 240 aaKnown RBP eCLIP15.37■□□□□ 0.05
IFT43-210ENST00000555370 MAP3K5Q99683 1374 aa15.36■□□□□ 0.05
IFT43-210ENST00000555370 RGPD2P0DJD1 1756 aa15.36■□□□□ 0.05
IFT43-210ENST00000555370 U2SURPO15042 1029 aaKnown RBP15.36■□□□□ 0.05
IFT43-210ENST00000555370 LMOD2Q6P5Q4 547 aa15.36■□□□□ 0.05
IFT43-210ENST00000555370 CCDC146Q8IYE0 955 aa15.36■□□□□ 0.05
IFT43-210ENST00000555370 RUNDC1Q96C34 613 aa15.36■□□□□ 0.05
IFT43-210ENST00000555370 COL18A1P39060 1754 aa15.35■□□□□ 0.05
IFT43-210ENST00000555370 ABCC6O95255 1503 aa15.35■□□□□ 0.05
IFT43-210ENST00000555370 IL13P35225 146 aa15.35■□□□□ 0.05
IFT43-210ENST00000555370 AMPHP49418 695 aa15.35■□□□□ 0.05
IFT43-210ENST00000555370 BCL11BQ9C0K0 894 aaPredicted RBP15.35■□□□□ 0.05
IFT43-210ENST00000555370 MTFR1LQ9H019 292 aa15.35■□□□□ 0.05
IFT43-210ENST00000555370 FAM208AQ9UK61 1670 aaKnown RBP15.35■□□□□ 0.05
IFT43-210ENST00000555370 NGEFQ8N5V2 710 aa15.33■□□□□ 0.04
IFT43-210ENST00000555370 JMYQ8N9B5 988 aa15.33■□□□□ 0.04
IFT43-210ENST00000555370 PNNQ9H307 717 aaKnown RBP15.33■□□□□ 0.04
IFT43-210ENST00000555370 NRAPQ86VF7 1730 aa15.33■□□□□ 0.04
IFT43-210ENST00000555370 HOXC9P31274 260 aa15.32■□□□□ 0.04
IFT43-210ENST00000555370 PDE3BQ13370 1112 aa15.32■□□□□ 0.04
IFT43-210ENST00000555370 EIF4A2Q14240 407 aaKnown RBP15.32■□□□□ 0.04
IFT43-210ENST00000555370 KLHL34Q8N239 644 aa15.32■□□□□ 0.04
IFT43-210ENST00000555370 GCP02774 474 aa15.31■□□□□ 0.04
IFT43-210ENST00000555370 HSP90AB2PQ58FF8 381 aa15.31■□□□□ 0.04
IFT43-210ENST00000555370 KLRG1Q96E93 195 aa15.31■□□□□ 0.04
IFT43-210ENST00000555370 APAF1O14727 1248 aa15.3■□□□□ 0.04
IFT43-210ENST00000555370 FCHSD2O94868 740 aa15.3■□□□□ 0.04
IFT43-210ENST00000555370 MAPK8IP3Q9UPT6 1336 aa15.3■□□□□ 0.04
IFT43-210ENST00000555370 ARHGEF25Q86VW2 580 aa15.29■□□□□ 0.04
IFT43-210ENST00000555370 IP6K1Q92551 441 aa15.29■□□□□ 0.04
IFT43-210ENST00000555370 PLEKHF1Q96S99 279 aa15.29■□□□□ 0.04
IFT43-210ENST00000555370 RSPH6AQ9H0K4 717 aa15.29■□□□□ 0.04
IFT43-210ENST00000555370 SALL2Q9Y467 1007 aaPredicted RBP15.29■□□□□ 0.04
IFT43-210ENST00000555370 GRIN3BO60391 1043 aa15.28■□□□□ 0.04
IFT43-210ENST00000555370 NCBP3Q53F19 620 aaKnown RBP15.28■□□□□ 0.04
IFT43-210ENST00000555370 TCP11L2Q8N4U5 519 aa15.28■□□□□ 0.04
IFT43-210ENST00000555370 STK32BQ9NY57 414 aa15.28■□□□□ 0.04
IFT43-210ENST00000555370 LMO7Q8WWI1 1683 aa15.28■□□□□ 0.04
IFT43-210ENST00000555370 SPATA31A1Q5TZJ5 1347 aa15.27■□□□□ 0.04
IFT43-210ENST00000555370 ZNF521Q96K83 1311 aa15.27■□□□□ 0.04
IFT43-210ENST00000555370 KIF3CO14782 793 aa15.27■□□□□ 0.04
IFT43-210ENST00000555370 NEFMP07197 916 aa15.27■□□□□ 0.04
IFT43-210ENST00000555370 PRKAR2BP31323 418 aa15.27■□□□□ 0.04
IFT43-210ENST00000555370 CPDO75976 1380 aa15.26■□□□□ 0.03
IFT43-210ENST00000555370 IGSF1Q8N6C5 1336 aa15.26■□□□□ 0.03
IFT43-210ENST00000555370 ZBTB7CA1YPR0 619 aa15.26■□□□□ 0.03
IFT43-210ENST00000555370 PLSCR1O15162 318 aa15.26■□□□□ 0.03
IFT43-210ENST00000555370 HMOX1P09601 288 aa15.26■□□□□ 0.03
IFT43-210ENST00000555370 YBX3P16989 372 aaKnown RBP eCLIP15.26■□□□□ 0.03
IFT43-210ENST00000555370 VIRMAQ69YN4 1812 aaKnown RBP15.26■□□□□ 0.03
IFT43-210ENST00000555370 KDRP35968 1356 aa15.25■□□□□ 0.03
IFT43-210ENST00000555370 HTRA3P83110 453 aa15.25■□□□□ 0.03
IFT43-210ENST00000555370 FAM161AQ3B820 660 aa15.25■□□□□ 0.03
IFT43-210ENST00000555370 SLC15A2Q16348 729 aa15.24■□□□□ 0.03
IFT43-210ENST00000555370 CCDC27Q2M243 656 aa15.24■□□□□ 0.03
IFT43-210ENST00000555370 TNS2Q63HR2 1409 aa15.24■□□□□ 0.03
IFT43-210ENST00000555370 COL14A1Q05707 1796 aaKnown RBP15.24■□□□□ 0.03
IFT43-210ENST00000555370 TMPOP42166 694 aaKnown RBP15.23■□□□□ 0.03
IFT43-210ENST00000555370 SULT6B1Q6IMI4 303 aa15.23■□□□□ 0.03
IFT43-210ENST00000555370 PROM2Q8N271 834 aa15.23■□□□□ 0.03
IFT43-210ENST00000555370 RRP7AQ9Y3A4 280 aaKnown RBP15.23■□□□□ 0.03
IFT43-210ENST00000555370 GOLGB1Q14789 3259 aaKnown RBP15.23■□□□□ 0.03
IFT43-210ENST00000555370 ADCY9O60503 1353 aa15.23■□□□□ 0.03
IFT43-210ENST00000555370 ZC3H6P61129 1189 aaKnown RBP15.22■□□□□ 0.03
IFT43-210ENST00000555370 AEBP1Q8IUX7 1158 aa15.22■□□□□ 0.03
IFT43-210ENST00000555370 NLGN2Q8NFZ4 835 aa15.22■□□□□ 0.03
IFT43-210ENST00000555370 LTV1Q96GA3 475 aaPredicted RBP15.22■□□□□ 0.03
IFT43-210ENST00000555370 EYA1Q99502 592 aa15.22■□□□□ 0.03
IFT43-210ENST00000555370 NCAPD2Q15021 1401 aa15.22■□□□□ 0.03
IFT43-210ENST00000555370 GOLGA2Q08379 1002 aa15.21■□□□□ 0.03
IFT43-210ENST00000555370 NEUROD2Q15784 382 aa15.21■□□□□ 0.03
IFT43-210ENST00000555370 WWC1Q8IX03 1113 aa15.21■□□□□ 0.03
IFT43-210ENST00000555370 USP35Q9P2H5 1018 aa15.21■□□□□ 0.03
IFT43-210ENST00000555370 KIAA0232Q92628 1395 aa15.21■□□□□ 0.02
IFT43-210ENST00000555370 NFE2L2Q16236 605 aa15.2■□□□□ 0.02
IFT43-210ENST00000555370 ANKRD24Q8TF21 1146 aa15.19■□□□□ 0.02
IFT43-210ENST00000555370 CDCA7LQ96GN5 454 aa15.19■□□□□ 0.02
IFT43-210ENST00000555370 PHACTR3Q96KR7 559 aa15.19■□□□□ 0.02
IFT43-210ENST00000555370 PARP4Q9UKK3 1724 aaKnown RBP15.19■□□□□ 0.02
IFT43-210ENST00000555370 LRRC37A3O60309 1634 aa15.18■□□□□ 0.02
IFT43-210ENST00000555370 HSPA1AP0DMV8 641 aaKnown RBP15.18■□□□□ 0.02
IFT43-210ENST00000555370 HSPA1BP0DMV9 641 aaKnown RBP15.18■□□□□ 0.02
IFT43-210ENST00000555370 RIPK4P57078 832 aa15.18■□□□□ 0.02
IFT43-210ENST00000555370 WDR63Q8IWG1 891 aa15.18■□□□□ 0.02
IFT43-210ENST00000555370 STRN4Q9NRL3 753 aa15.18■□□□□ 0.02
IFT43-210ENST00000555370 ERBB3P21860 1342 aa15.17■□□□□ 0.02
IFT43-210ENST00000555370 E9PSI1 815 aa15.17■□□□□ 0.02
IFT43-210ENST00000555370 SLFN5Q08AF3 891 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms