RNA–Protein interactions for RNA: ENST00000555322.5

RPGRIP1-207, Transcript of RPGR interacting protein 1, humanhuman

TSL 1 (best)

Gene RPGRIP1, Length 2,373 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-207ENST00000555322 MBIPQ9NS73 344 aa11.75□□□□□ -0.53
RPGRIP1-207ENST00000555322 MAP3K5Q99683 1374 aa11.75□□□□□ -0.53
RPGRIP1-207ENST00000555322 CHL1O00533 1208 aa11.75□□□□□ -0.53
RPGRIP1-207ENST00000555322 SSH1Q8WYL5 1049 aa11.75□□□□□ -0.53
RPGRIP1-207ENST00000555322 NUTM2GQ5VZR2 741 aa11.74□□□□□ -0.53
RPGRIP1-207ENST00000555322 ATF7IPQ6VMQ6 1270 aa11.74□□□□□ -0.53
RPGRIP1-207ENST00000555322 DZIP1LQ8IYY4 767 aaKnown RBP11.74□□□□□ -0.53
RPGRIP1-207ENST00000555322 RTF1Q92541 710 aaKnown RBP11.74□□□□□ -0.53
RPGRIP1-207ENST00000555322 CPDO75976 1380 aa11.74□□□□□ -0.53
RPGRIP1-207ENST00000555322 MVPQ14764 893 aaKnown RBP11.74□□□□□ -0.53
RPGRIP1-207ENST00000555322 FRAT1Q92837 279 aaPredicted RBP11.74□□□□□ -0.53
RPGRIP1-207ENST00000555322 VAMP4O75379 141 aa11.73□□□□□ -0.53
RPGRIP1-207ENST00000555322 MTHFSDQ2M296 383 aaKnown RBP11.73□□□□□ -0.53
RPGRIP1-207ENST00000555322 FTSJ3Q8IY81 847 aaKnown RBP11.73□□□□□ -0.53
RPGRIP1-207ENST00000555322 DDX19BQ9UMR2 479 aa11.72□□□□□ -0.53
RPGRIP1-207ENST00000555322 NHSL1Q5SYE7 1610 aa11.72□□□□□ -0.53
RPGRIP1-207ENST00000555322 GNAT3A8MTJ3 354 aa11.72□□□□□ -0.53
RPGRIP1-207ENST00000555322 TWISTNBQ3B726 338 aaPredicted RBP11.72□□□□□ -0.53
RPGRIP1-207ENST00000555322 SPATA31A3Q5VYP0 1347 aa11.72□□□□□ -0.53
RPGRIP1-207ENST00000555322 COL18A1P39060 1754 aa11.72□□□□□ -0.53
RPGRIP1-207ENST00000555322 PANK1Q8TE04 598 aa11.71□□□□□ -0.53
RPGRIP1-207ENST00000555322 ADAMTS7Q9UKP4 1686 aa11.71□□□□□ -0.53
RPGRIP1-207ENST00000555322 TRIM27P14373 513 aa11.71□□□□□ -0.54
RPGRIP1-207ENST00000555322 AMOTQ4VCS5 1084 aa11.71□□□□□ -0.54
RPGRIP1-207ENST00000555322 THUMPD2Q9BTF0 503 aaKnown RBP11.71□□□□□ -0.54
RPGRIP1-207ENST00000555322 CEMIPQ8WUJ3 1361 aa11.7□□□□□ -0.54
RPGRIP1-207ENST00000555322 MRPL50Q8N5N7 158 aaKnown RBP11.7□□□□□ -0.54
RPGRIP1-207ENST00000555322 COG6Q9Y2V7 657 aa11.7□□□□□ -0.54
RPGRIP1-207ENST00000555322 LAS1LQ9Y4W2 734 aaKnown RBP11.7□□□□□ -0.54
RPGRIP1-207ENST00000555322 FAM83GA6ND36 823 aa11.7□□□□□ -0.54
RPGRIP1-207ENST00000555322 BCL2L13Q9BXK5 485 aa11.69□□□□□ -0.54
RPGRIP1-207ENST00000555322 CHMP4AQ9BY43 222 aa11.69□□□□□ -0.54
RPGRIP1-207ENST00000555322 API5Q9BZZ5 524 aaKnown RBP11.69□□□□□ -0.54
RPGRIP1-207ENST00000555322 NOB1Q9ULX3 412 aaKnown RBP11.69□□□□□ -0.54
RPGRIP1-207ENST00000555322 SOS2Q07890 1332 aaPredicted RBP11.69□□□□□ -0.54
RPGRIP1-207ENST00000555322 TULP1O00294 542 aaPredicted RBP11.69□□□□□ -0.54
RPGRIP1-207ENST00000555322 RLBP1P12271 317 aa11.69□□□□□ -0.54
RPGRIP1-207ENST00000555322 BRINP3Q76B58 766 aa11.69□□□□□ -0.54
RPGRIP1-207ENST00000555322 HOMEZQ8IX15 550 aa11.69□□□□□ -0.54
RPGRIP1-207ENST00000555322 ABCC4O15439 1325 aa11.69□□□□□ -0.54
RPGRIP1-207ENST00000555322 ERBB3P21860 1342 aa11.69□□□□□ -0.54
RPGRIP1-207ENST00000555322 MCM10Q7L590 875 aa11.68□□□□□ -0.54
RPGRIP1-207ENST00000555322 ABCA3Q99758 1704 aa11.68□□□□□ -0.54
RPGRIP1-207ENST00000555322 RBM19Q9Y4C8 960 aaKnown RBP11.68□□□□□ -0.54
RPGRIP1-207ENST00000555322 PTPRCP08575 1304 aa11.68□□□□□ -0.54
RPGRIP1-207ENST00000555322 KDM3BQ7LBC6 1761 aa11.68□□□□□ -0.54
RPGRIP1-207ENST00000555322 PLEKHO1Q53GL0 409 aaPredicted RBP11.68□□□□□ -0.54
RPGRIP1-207ENST00000555322 NBPF6Q5VWK0 638 aa11.68□□□□□ -0.54
RPGRIP1-207ENST00000555322 ANKRD24Q8TF21 1146 aa11.68□□□□□ -0.54
RPGRIP1-207ENST00000555322 NBPF4Q96M43 638 aa11.68□□□□□ -0.54
RPGRIP1-207ENST00000555322 ZNF335Q9H4Z2 1342 aaPredicted RBP11.67□□□□□ -0.54
RPGRIP1-207ENST00000555322 XPCQ01831 940 aaPredicted RBP11.67□□□□□ -0.54
RPGRIP1-207ENST00000555322 DCTN1Q14203 1278 aa11.67□□□□□ -0.54
RPGRIP1-207ENST00000555322 C8orf58Q8NAV2 365 aa11.67□□□□□ -0.54
RPGRIP1-207ENST00000555322 RGPD2P0DJD1 1756 aa11.67□□□□□ -0.54
RPGRIP1-207ENST00000555322 AKAP4Q5JQC9 854 aa11.67□□□□□ -0.54
RPGRIP1-207ENST00000555322 RWDD1Q9H446 243 aaPredicted RBP11.67□□□□□ -0.54
RPGRIP1-207ENST00000555322 TSPYL6Q8N831 410 aa11.66□□□□□ -0.54
RPGRIP1-207ENST00000555322 SLAIN2Q9P270 581 aa11.66□□□□□ -0.54
RPGRIP1-207ENST00000555322 TSPYL4Q9UJ04 414 aa11.66□□□□□ -0.54
RPGRIP1-207ENST00000555322 PKD1L3Q7Z443 1732 aa11.66□□□□□ -0.54
RPGRIP1-207ENST00000555322 HOXB7P09629 217 aa11.65□□□□□ -0.54
RPGRIP1-207ENST00000555322 HDAC1Q13547 482 aaPredicted RBP11.65□□□□□ -0.54
RPGRIP1-207ENST00000555322 LMOD2Q6P5Q4 547 aa11.65□□□□□ -0.54
RPGRIP1-207ENST00000555322 LTV1Q96GA3 475 aaPredicted RBP11.65□□□□□ -0.54
RPGRIP1-207ENST00000555322 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.65□□□□□ -0.54
RPGRIP1-207ENST00000555322 PARP4Q9UKK3 1724 aaKnown RBP11.65□□□□□ -0.54
RPGRIP1-207ENST00000555322 N4BP2Q86UW6 1770 aaPredicted RBP11.65□□□□□ -0.54
RPGRIP1-207ENST00000555322 TAF7Q15545 349 aaPredicted RBP11.65□□□□□ -0.54
RPGRIP1-207ENST00000555322 AHDC1Q5TGY3 1603 aaPredicted RBP11.64□□□□□ -0.55
RPGRIP1-207ENST00000555322 ITPRIPQ8IWB1 547 aa11.64□□□□□ -0.55
RPGRIP1-207ENST00000555322 TMEM57Q8N5G2 664 aa11.64□□□□□ -0.55
RPGRIP1-207ENST00000555322 ZBTB40Q9NUA8 1239 aa11.64□□□□□ -0.55
RPGRIP1-207ENST00000555322 PXDNLA1KZ92 1463 aa11.64□□□□□ -0.55
RPGRIP1-207ENST00000555322 SIPA1L3O60292 1781 aaPredicted RBP11.64□□□□□ -0.55
RPGRIP1-207ENST00000555322 RGPD5Q99666 1765 aa11.63□□□□□ -0.55
RPGRIP1-207ENST00000555322 MRC1P22897 1456 aa11.63□□□□□ -0.55
RPGRIP1-207ENST00000555322 RGS12O14924 1447 aa11.63□□□□□ -0.55
RPGRIP1-207ENST00000555322 IL17REQ8NFR9 667 aa11.63□□□□□ -0.55
RPGRIP1-207ENST00000555322 TNNQ9UQP3 1299 aa11.63□□□□□ -0.55
RPGRIP1-207ENST00000555322 CACNA1FO60840 1977 aa11.63□□□□□ -0.55
RPGRIP1-207ENST00000555322 C1orf141Q5JVX7 400 aa11.62□□□□□ -0.55
RPGRIP1-207ENST00000555322 COL22A1Q8NFW1 1626 aaPredicted RBP11.62□□□□□ -0.55
RPGRIP1-207ENST00000555322 INTS3Q68E01 1043 aaKnown RBP11.62□□□□□ -0.55
RPGRIP1-207ENST00000555322 ZNF530Q6P9A1 599 aaPredicted RBP11.62□□□□□ -0.55
RPGRIP1-207ENST00000555322 USHBP1Q8N6Y0 703 aa11.62□□□□□ -0.55
RPGRIP1-207ENST00000555322 PCDHB15Q9Y5E8 787 aa11.62□□□□□ -0.55
RPGRIP1-207ENST00000555322 IGHDP01880 384 aa11.61□□□□□ -0.55
RPGRIP1-207ENST00000555322 CCDC30Q5VVM6 783 aa11.61□□□□□ -0.55
RPGRIP1-207ENST00000555322 AXIN2Q9Y2T1 843 aa11.61□□□□□ -0.55
RPGRIP1-207ENST00000555322 LRRC59Q96AG4 307 aaKnown RBP11.61□□□□□ -0.55
RPGRIP1-207ENST00000555322 ZBTB7CA1YPR0 619 aa11.6□□□□□ -0.55
RPGRIP1-207ENST00000555322 RAPGEF4Q8WZA2 1011 aa11.6□□□□□ -0.55
RPGRIP1-207ENST00000555322 STK31Q9BXU1 1019 aa11.6□□□□□ -0.55
RPGRIP1-207ENST00000555322 VIRMAQ69YN4 1812 aaKnown RBP11.6□□□□□ -0.55
RPGRIP1-207ENST00000555322 LTBP4Q8N2S1 1624 aa11.6□□□□□ -0.55
RPGRIP1-207ENST00000555322 SPG7Q9UQ90 795 aa11.6□□□□□ -0.55
RPGRIP1-207ENST00000555322 SCN11AQ9UI33 1791 aa11.6□□□□□ -0.55
RPGRIP1-207ENST00000555322 ZBTB7BO15156 539 aaPredicted RBP11.59□□□□□ -0.55
RPGRIP1-207ENST00000555322 TATP17735 454 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms