RNA–Protein interactions for RNA: ENST00000555231.5

XRCC3-212, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-212ENST00000555231 AMPHP49418 695 aa18.53■□□□□ 0.56
XRCC3-212ENST00000555231 PELP1Q8IZL8 1130 aaKnown RBP18.53■□□□□ 0.56
XRCC3-212ENST00000555231 SLC16A10Q8TF71 515 aa18.53■□□□□ 0.56
XRCC3-212ENST00000555231 COG3Q96JB2 828 aa18.53■□□□□ 0.56
XRCC3-212ENST00000555231 TFCP2L1Q9NZI6 479 aa18.53■□□□□ 0.56
XRCC3-212ENST00000555231 ANKRD36BQ8N2N9 1353 aa18.53■□□□□ 0.56
XRCC3-212ENST00000555231 TONSLQ96HA7 1378 aa18.53■□□□□ 0.56
XRCC3-212ENST00000555231 PUS7Q96PZ0 661 aaKnown RBP18.52■□□□□ 0.56
XRCC3-212ENST00000555231 MEGF6O75095 1541 aa18.52■□□□□ 0.56
XRCC3-212ENST00000555231 NSD2O96028 1365 aa18.52■□□□□ 0.55
XRCC3-212ENST00000555231 ZCRB1Q8TBF4 217 aaKnown RBP18.51■□□□□ 0.55
XRCC3-212ENST00000555231 SENP3-EIF4A1A0A087X0R7 540 aa18.5■□□□□ 0.55
XRCC3-212ENST00000555231 ST20-MTHFSA0A0A6YYL1 179 aa18.5■□□□□ 0.55
XRCC3-212ENST00000555231 NLGN2Q8NFZ4 835 aa18.5■□□□□ 0.55
XRCC3-212ENST00000555231 TESK2Q96S53 571 aa18.5■□□□□ 0.55
XRCC3-212ENST00000555231 C1QTNF8P60827 252 aa18.49■□□□□ 0.55
XRCC3-212ENST00000555231 USHBP1Q8N6Y0 703 aa18.49■□□□□ 0.55
XRCC3-212ENST00000555231 RRS1Q15050 365 aaKnown RBP18.48■□□□□ 0.55
XRCC3-212ENST00000555231 CCNL1Q9UK58 526 aaPredicted RBP18.48■□□□□ 0.55
XRCC3-212ENST00000555231 MSH5O43196 834 aa18.47■□□□□ 0.55
XRCC3-212ENST00000555231 NBPF6Q5VWK0 638 aa18.47■□□□□ 0.55
XRCC3-212ENST00000555231 NBPF4Q96M43 638 aa18.47■□□□□ 0.55
XRCC3-212ENST00000555231 GGNBP2Q9H3C7 697 aa18.46■□□□□ 0.55
XRCC3-212ENST00000555231 COL23A1Q86Y22 540 aaPredicted RBP18.45■□□□□ 0.54
XRCC3-212ENST00000555231 USP47Q96K76 1375 aa18.44■□□□□ 0.54
XRCC3-212ENST00000555231 MSL1Q68DK7 614 aa18.44■□□□□ 0.54
XRCC3-212ENST00000555231 RTL1A6NKG5 1358 aa18.43■□□□□ 0.54
XRCC3-212ENST00000555231 C5P01031 1676 aa18.43■□□□□ 0.54
XRCC3-212ENST00000555231 FYB1O15117 783 aa18.42■□□□□ 0.54
XRCC3-212ENST00000555231 RAPGEF4Q8WZA2 1011 aa18.42■□□□□ 0.54
XRCC3-212ENST00000555231 GIGYF1O75420 1035 aaPredicted RBP18.41■□□□□ 0.54
XRCC3-212ENST00000555231 YBX3P16989 372 aaKnown RBP eCLIP18.41■□□□□ 0.54
XRCC3-212ENST00000555231 TAF1LQ8IZX4 1826 aa18.41■□□□□ 0.54
XRCC3-212ENST00000555231 KIF20BQ96Q89 1820 aa18.41■□□□□ 0.54
XRCC3-212ENST00000555231 SMG6Q86US8 1419 aaKnown RBP18.4■□□□□ 0.54
XRCC3-212ENST00000555231 TATP17735 454 aaPredicted RBP18.4■□□□□ 0.54
XRCC3-212ENST00000555231 HSP90AB2PQ58FF8 381 aa18.4■□□□□ 0.54
XRCC3-212ENST00000555231 ITGB4P16144 1822 aa18.38■□□□□ 0.53
XRCC3-212ENST00000555231 CGNL1Q0VF96 1302 aa18.38■□□□□ 0.53
XRCC3-212ENST00000555231 TOGARAM1Q9Y4F4 1720 aa18.37■□□□□ 0.53
XRCC3-212ENST00000555231 SLC24A1O60721 1099 aa18.37■□□□□ 0.53
XRCC3-212ENST00000555231 MPRIPQ6WCQ1 1025 aa18.37■□□□□ 0.53
XRCC3-212ENST00000555231 PALLDQ8WX93 1383 aa18.37■□□□□ 0.53
XRCC3-212ENST00000555231 GRIN3BO60391 1043 aa18.36■□□□□ 0.53
XRCC3-212ENST00000555231 INSRP06213 1382 aa18.36■□□□□ 0.53
XRCC3-212ENST00000555231 TMF1P82094 1093 aa18.36■□□□□ 0.53
XRCC3-212ENST00000555231 PCDH11XQ9BZA7 1347 aa18.36■□□□□ 0.53
XRCC3-212ENST00000555231 PCDH11YQ9BZA8 1340 aa18.36■□□□□ 0.53
XRCC3-212ENST00000555231 GOLGB1Q14789 3259 aaKnown RBP18.36■□□□□ 0.53
XRCC3-212ENST00000555231 CYP27B1O15528 508 aa18.35■□□□□ 0.53
XRCC3-212ENST00000555231 FLT4P35916 1363 aa18.34■□□□□ 0.53
XRCC3-212ENST00000555231 SMIM5Q71RC9 77 aa18.34■□□□□ 0.53
XRCC3-212ENST00000555231 C4BP0C0L5 1744 aa18.34■□□□□ 0.53
XRCC3-212ENST00000555231 PKD1L3Q7Z443 1732 aa18.32■□□□□ 0.52
XRCC3-212ENST00000555231 AMIGO3Q86WK7 504 aa18.32■□□□□ 0.52
XRCC3-212ENST00000555231 EMILIN1Q9Y6C2 1016 aa18.32■□□□□ 0.52
XRCC3-212ENST00000555231 UBR3Q6ZT12 1888 aa18.32■□□□□ 0.52
XRCC3-212ENST00000555231 ATP10DQ9P241 1426 aa18.32■□□□□ 0.52
XRCC3-212ENST00000555231 PHF14O94880 888 aa18.31■□□□□ 0.52
XRCC3-212ENST00000555231 FLAD1Q8NFF5 587 aa18.31■□□□□ 0.52
XRCC3-212ENST00000555231 WWC3Q9ULE0 1092 aa18.31■□□□□ 0.52
XRCC3-212ENST00000555231 CD2APQ9Y5K6 639 aa18.31■□□□□ 0.52
XRCC3-212ENST00000555231 AK7Q96M32 723 aa18.3■□□□□ 0.52
XRCC3-212ENST00000555231 PIGBQ92521 554 aa18.29■□□□□ 0.52
XRCC3-212ENST00000555231 SMARCC1Q92922 1105 aaPredicted RBP18.29■□□□□ 0.52
XRCC3-212ENST00000555231 CARD14Q9BXL6 1004 aa18.29■□□□□ 0.52
XRCC3-212ENST00000555231 KIF24Q5T7B8 1368 aa18.29■□□□□ 0.52
XRCC3-212ENST00000555231 MAP2P11137 1827 aaKnown RBP18.28■□□□□ 0.52
XRCC3-212ENST00000555231 PPM1GO15355 546 aaPredicted RBP18.28■□□□□ 0.52
XRCC3-212ENST00000555231 NSD3Q9BZ95 1437 aa18.28■□□□□ 0.52
XRCC3-212ENST00000555231 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.26■□□□□ 0.51
XRCC3-212ENST00000555231 HMGB2P26583 209 aaKnown RBP18.26■□□□□ 0.51
XRCC3-212ENST00000555231 ZNF526Q8TF50 670 aaPredicted RBP18.26■□□□□ 0.51
XRCC3-212ENST00000555231 CDCA8Q53HL2 280 aa18.25■□□□□ 0.51
XRCC3-212ENST00000555231 LINC00116Q8NCU8 138 aa18.25■□□□□ 0.51
XRCC3-212ENST00000555231 ANKRD26Q9UPS8 1709 aa18.25■□□□□ 0.51
XRCC3-212ENST00000555231 IGSF1Q8N6C5 1336 aa18.24■□□□□ 0.51
XRCC3-212ENST00000555231 NCAPD2Q15021 1401 aa18.24■□□□□ 0.51
XRCC3-212ENST00000555231 NKX1-1Q15270 411 aaPredicted RBP18.24■□□□□ 0.51
XRCC3-212ENST00000555231 GPBP1L1Q9HC44 474 aaPredicted RBP18.24■□□□□ 0.51
XRCC3-212ENST00000555231 SPG7Q9UQ90 795 aa18.24■□□□□ 0.51
XRCC3-212ENST00000555231 LOC102724428A0A0B4J2F2 783 aa18.23■□□□□ 0.51
XRCC3-212ENST00000555231 SIK1P57059 783 aa18.23■□□□□ 0.51
XRCC3-212ENST00000555231 EYA1Q99502 592 aa18.23■□□□□ 0.51
XRCC3-212ENST00000555231 ADCY9O60503 1353 aa18.22■□□□□ 0.51
XRCC3-212ENST00000555231 ITPK1Q13572 414 aa18.22■□□□□ 0.51
XRCC3-212ENST00000555231 TMOD3Q9NYL9 352 aa18.22■□□□□ 0.51
XRCC3-212ENST00000555231 ASAP1Q9ULH1 1129 aa18.22■□□□□ 0.51
XRCC3-212ENST00000555231 GNPATO15228 680 aa18.21■□□□□ 0.51
XRCC3-212ENST00000555231 SSFA2P28290 1259 aa18.21■□□□□ 0.51
XRCC3-212ENST00000555231 WASHC2AQ641Q2 1341 aa18.21■□□□□ 0.51
XRCC3-212ENST00000555231 ATP6V1AP38606 617 aa18.2■□□□□ 0.5
XRCC3-212ENST00000555231 PHKG2P15735 406 aa18.19■□□□□ 0.5
XRCC3-212ENST00000555231 IFNL2Q8IZJ0 200 aa18.19■□□□□ 0.5
XRCC3-212ENST00000555231 POLKQ9UBT6 870 aa18.18■□□□□ 0.5
XRCC3-212ENST00000555231 N4BP2Q86UW6 1770 aaPredicted RBP18.17■□□□□ 0.5
XRCC3-212ENST00000555231 TNNT2P45379 298 aaPredicted RBP18.17■□□□□ 0.5
XRCC3-212ENST00000555231 POLR3GLQ9BT43 218 aa18.17■□□□□ 0.5
XRCC3-212ENST00000555231 ATG3Q9NT62 314 aa18.17■□□□□ 0.5
XRCC3-212ENST00000555231 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms