RNA–Protein interactions for RNA: ENST00000554960.1

SIPA1L1-208, Transcript of signal induced proliferation associated 1 like 1, human

TSL 5

Gene SIPA1L1, Length 1,136 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIPA1L1-208	ENST00000554960	ROBO1	Q9Y6N7	1651 aa		13.99	□□□□□ -0.17
SIPA1L1-208	ENST00000554960	HAP1	P54257	671 aa	Predicted RBP	13.99	□□□□□ -0.17
SIPA1L1-208	ENST00000554960	DDX12P	Q92771	950 aa		13.99	□□□□□ -0.17
SIPA1L1-208	ENST00000554960	ATAD2	Q6PL18	1390 aa		13.98	□□□□□ -0.17
SIPA1L1-208	ENST00000554960	SPDYE16	A6NNV3	312 aa	Predicted RBP	13.98	□□□□□ -0.17
SIPA1L1-208	ENST00000554960	PHF14	O94880	888 aa		13.98	□□□□□ -0.17
SIPA1L1-208	ENST00000554960	PTPRE	P23469	700 aa		13.98	□□□□□ -0.17
SIPA1L1-208	ENST00000554960	TYW1B	Q6NUM6	668 aa		13.98	□□□□□ -0.17
SIPA1L1-208	ENST00000554960	DDX17	Q92841	729 aa	Known RBP	13.98	□□□□□ -0.17
SIPA1L1-208	ENST00000554960	CABP1	Q9NZU7	370 aa		13.98	□□□□□ -0.17
SIPA1L1-208	ENST00000554960	ARIH1	Q9Y4X5	557 aa	Predicted RBP	13.98	□□□□□ -0.17
SIPA1L1-208	ENST00000554960	DISP3	Q9P2K9	1392 aa		13.97	□□□□□ -0.17
SIPA1L1-208	ENST00000554960	NPHP3	Q7Z494	1330 aa		13.97	□□□□□ -0.17
SIPA1L1-208	ENST00000554960	RGPD8	O14715	1765 aa	Predicted RBP	13.97	□□□□□ -0.17
SIPA1L1-208	ENST00000554960	XPC	Q01831	940 aa	Predicted RBP	13.97	□□□□□ -0.17
SIPA1L1-208	ENST00000554960	ADGRD1	Q6QNK2	874 aa		13.97	□□□□□ -0.17
SIPA1L1-208	ENST00000554960	PPIP5K1	Q6PFW1	1433 aa		13.97	□□□□□ -0.17
SIPA1L1-208	ENST00000554960	HSPA1L	P34931	641 aa		13.96	□□□□□ -0.17
SIPA1L1-208	ENST00000554960	PUS7	Q96PZ0	661 aa	Known RBP	13.96	□□□□□ -0.17
SIPA1L1-208	ENST00000554960	ATP7B	P35670	1465 aa		13.95	□□□□□ -0.18
SIPA1L1-208	ENST00000554960	PTGER2	P43116	358 aa		13.95	□□□□□ -0.18
SIPA1L1-208	ENST00000554960	LMOD2	Q6P5Q4	547 aa		13.95	□□□□□ -0.18
SIPA1L1-208	ENST00000554960	KRT28	Q7Z3Y7	464 aa		13.95	□□□□□ -0.18
SIPA1L1-208	ENST00000554960	FBXW7	Q969H0	707 aa		13.95	□□□□□ -0.18
SIPA1L1-208	ENST00000554960	ITSN1	Q15811	1721 aa		13.95	□□□□□ -0.18
SIPA1L1-208	ENST00000554960	ACE	P12821	1306 aa		13.94	□□□□□ -0.18
SIPA1L1-208	ENST00000554960	USP32	Q8NFA0	1604 aa		13.94	□□□□□ -0.18
SIPA1L1-208	ENST00000554960	PLEKHG3	A1L390	1219 aa		13.94	□□□□□ -0.18
SIPA1L1-208	ENST00000554960	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.94	□□□□□ -0.18
SIPA1L1-208	ENST00000554960	TERF2IP	Q9NYB0	399 aa		13.94	□□□□□ -0.18
SIPA1L1-208	ENST00000554960	KIF1A	Q12756	1690 aa		13.94	□□□□□ -0.18
SIPA1L1-208	ENST00000554960	KCNV2	Q8TDN2	545 aa		13.93	□□□□□ -0.18
SIPA1L1-208	ENST00000554960	LRRC59	Q96AG4	307 aa	Known RBP	13.93	□□□□□ -0.18
SIPA1L1-208	ENST00000554960	EPAS1	Q99814	870 aa		13.93	□□□□□ -0.18
SIPA1L1-208	ENST00000554960	SLC12A5	Q9H2X9	1139 aa		13.93	□□□□□ -0.18
SIPA1L1-208	ENST00000554960	PHLPP1	O60346	1717 aa		13.93	□□□□□ -0.18
SIPA1L1-208	ENST00000554960	TK2	O00142	265 aa		13.92	□□□□□ -0.18
SIPA1L1-208	ENST00000554960	RNF166	Q96A37	237 aa	Predicted RBP	13.92	□□□□□ -0.18
SIPA1L1-208	ENST00000554960	C11orf95	C9JLR9	678 aa	Predicted RBP	13.9	□□□□□ -0.18
SIPA1L1-208	ENST00000554960	NBR1	Q14596	966 aa		13.9	□□□□□ -0.18
SIPA1L1-208	ENST00000554960	NINL	Q9Y2I6	1382 aa		13.9	□□□□□ -0.18
SIPA1L1-208	ENST00000554960	KTN1	Q86UP2	1357 aa	Known RBP	13.89	□□□□□ -0.19
SIPA1L1-208	ENST00000554960	AHDC1	Q5TGY3	1603 aa	Predicted RBP	13.89	□□□□□ -0.19
SIPA1L1-208	ENST00000554960	SOS2	Q07890	1332 aa	Predicted RBP	13.89	□□□□□ -0.19
SIPA1L1-208	ENST00000554960	KIF7	Q2M1P5	1343 aa		13.89	□□□□□ -0.19
SIPA1L1-208	ENST00000554960	TOPAZ1	Q8N9V7	1692 aa		13.88	□□□□□ -0.19
SIPA1L1-208	ENST00000554960	POLR3A	O14802	1390 aa	Predicted RBP	13.88	□□□□□ -0.19
SIPA1L1-208	ENST00000554960	VPS9D1	Q9Y2B5	631 aa		13.88	□□□□□ -0.19
SIPA1L1-208	ENST00000554960	NHSL1	Q5SYE7	1610 aa		13.88	□□□□□ -0.19
SIPA1L1-208	ENST00000554960	GRXCR2	A6NFK2	248 aa		13.87	□□□□□ -0.19
SIPA1L1-208	ENST00000554960	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.87	□□□□□ -0.19
SIPA1L1-208	ENST00000554960	ARHGEF1	Q92888	912 aa	Known RBP	13.87	□□□□□ -0.19
SIPA1L1-208	ENST00000554960	ABTB2	Q8N961	1025 aa		13.86	□□□□□ -0.19
SIPA1L1-208	ENST00000554960	PXDN	Q92626	1479 aa		13.86	□□□□□ -0.19
SIPA1L1-208	ENST00000554960	SBNO1	A3KN83	1393 aa		13.85	□□□□□ -0.19
SIPA1L1-208	ENST00000554960	CCDC7	Q96M83	1385 aa		13.85	□□□□□ -0.19
SIPA1L1-208	ENST00000554960	JCAD	Q9P266	1359 aa		13.85	□□□□□ -0.19
SIPA1L1-208	ENST00000554960	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.85	□□□□□ -0.19
SIPA1L1-208	ENST00000554960	NUTM2E	B1AL46	878 aa	Predicted RBP	13.85	□□□□□ -0.19
SIPA1L1-208	ENST00000554960	PPP1R3G	B7ZBB8	358 aa		13.85	□□□□□ -0.19
SIPA1L1-208	ENST00000554960	HR	O43593	1189 aa		13.85	□□□□□ -0.19
SIPA1L1-208	ENST00000554960	COL9A1	P20849	921 aa		13.85	□□□□□ -0.19
SIPA1L1-208	ENST00000554960	NUTM2G	Q5VZR2	741 aa		13.85	□□□□□ -0.19
SIPA1L1-208	ENST00000554960	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.85	□□□□□ -0.19
SIPA1L1-208	ENST00000554960	ZBED2	Q9BTP6	218 aa		13.85	□□□□□ -0.19
SIPA1L1-208	ENST00000554960	SPATA31A3	Q5VYP0	1347 aa		13.85	□□□□□ -0.19
SIPA1L1-208	ENST00000554960	ANKRD36B	Q8N2N9	1353 aa		13.84	□□□□□ -0.19
SIPA1L1-208	ENST00000554960	USP6	P35125	1406 aa		13.84	□□□□□ -0.19
SIPA1L1-208	ENST00000554960	COL16A1	Q07092	1604 aa	Predicted RBP	13.84	□□□□□ -0.19
SIPA1L1-208	ENST00000554960	C6orf132	Q5T0Z8	1188 aa		13.84	□□□□□ -0.19
SIPA1L1-208	ENST00000554960	PANK3	Q9H999	370 aa		13.84	□□□□□ -0.19
SIPA1L1-208	ENST00000554960	WASHC2A	Q641Q2	1341 aa		13.84	□□□□□ -0.19
SIPA1L1-208	ENST00000554960		A0A1W2PP64	1363 aa		13.83	□□□□□ -0.19
SIPA1L1-208	ENST00000554960	ARHGEF10	O15013	1369 aa		13.83	□□□□□ -0.19
SIPA1L1-208	ENST00000554960	BRD4	O60885	1362 aa	Predicted RBP	13.83	□□□□□ -0.19
SIPA1L1-208	ENST00000554960	CPSF1	Q10570	1443 aa	Known RBP	13.83	□□□□□ -0.2
SIPA1L1-208	ENST00000554960	TNS3	Q68CZ2	1445 aa		13.83	□□□□□ -0.2
SIPA1L1-208	ENST00000554960	EN1	Q05925	392 aa	Predicted RBP	13.83	□□□□□ -0.2
SIPA1L1-208	ENST00000554960	SLC4A5	Q9BY07	1137 aa		13.83	□□□□□ -0.2
SIPA1L1-208	ENST00000554960	TTC21B	Q7Z4L5	1316 aa		13.83	□□□□□ -0.2
SIPA1L1-208	ENST00000554960	MAP3K7	O43318	606 aa		13.82	□□□□□ -0.2
SIPA1L1-208	ENST00000554960	MEX3C	Q5U5Q3	659 aa	Known RBP	13.82	□□□□□ -0.2
SIPA1L1-208	ENST00000554960	NLRP13	Q86W25	1043 aa		13.82	□□□□□ -0.2
SIPA1L1-208	ENST00000554960	TTC21A	Q8NDW8	1320 aa		13.82	□□□□□ -0.2
SIPA1L1-208	ENST00000554960	KNSTRN	Q9Y448	316 aa		13.81	□□□□□ -0.2
SIPA1L1-208	ENST00000554960	AKAP12	Q02952	1782 aa		13.81	□□□□□ -0.2
SIPA1L1-208	ENST00000554960	EDC4	Q6P2E9	1401 aa	Known RBP	13.81	□□□□□ -0.2
SIPA1L1-208	ENST00000554960	CD163L1	Q9NR16	1453 aa		13.8	□□□□□ -0.2
SIPA1L1-208	ENST00000554960	CABLES1	Q8TDN4	633 aa		13.8	□□□□□ -0.2
SIPA1L1-208	ENST00000554960	SPATA31A6	Q5VVP1	1343 aa		13.8	□□□□□ -0.2
SIPA1L1-208	ENST00000554960	PNPLA6	Q8IY17	1366 aa		13.8	□□□□□ -0.2
SIPA1L1-208	ENST00000554960	PRIM1	P49642	420 aa	Known RBP	13.79	□□□□□ -0.2
SIPA1L1-208	ENST00000554960	TSR1	Q2NL82	804 aa	Known RBP	13.79	□□□□□ -0.2
SIPA1L1-208	ENST00000554960	NME9	Q86XW9	330 aa		13.79	□□□□□ -0.2
SIPA1L1-208	ENST00000554960	NSD3	Q9BZ95	1437 aa		13.79	□□□□□ -0.2
SIPA1L1-208	ENST00000554960	MYOM1	P52179	1685 aa		13.79	□□□□□ -0.2
SIPA1L1-208	ENST00000554960	ADAMTS2	O95450	1211 aa		13.78	□□□□□ -0.2
SIPA1L1-208	ENST00000554960	PROX2	Q3B8N5	592 aa		13.78	□□□□□ -0.2
SIPA1L1-208	ENST00000554960	COG3	Q96JB2	828 aa		13.78	□□□□□ -0.2
SIPA1L1-208	ENST00000554960	CARD14	Q9BXL6	1004 aa		13.78	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms