RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 WNK3Q9BYP7 1800 aa21.85■■□□□ 1.09
SPTLC2-203ENST00000554901 MEGF6O75095 1541 aa21.85■■□□□ 1.09
SPTLC2-203ENST00000554901 PARP4Q9UKK3 1724 aaKnown RBP21.84■■□□□ 1.09
SPTLC2-203ENST00000554901 THSD7AQ9UPZ6 1657 aa21.84■■□□□ 1.09
SPTLC2-203ENST00000554901 AMOTQ4VCS5 1084 aa21.84■■□□□ 1.09
SPTLC2-203ENST00000554901 NEFMP07197 916 aa21.83■■□□□ 1.09
SPTLC2-203ENST00000554901 PRKAR2BP31323 418 aa21.83■■□□□ 1.09
SPTLC2-203ENST00000554901 PLEKHO1Q53GL0 409 aaPredicted RBP21.81■■□□□ 1.08
SPTLC2-203ENST00000554901 PLEKHF1Q96S99 279 aa21.81■■□□□ 1.08
SPTLC2-203ENST00000554901 SPG7Q9UQ90 795 aa21.81■■□□□ 1.08
SPTLC2-203ENST00000554901 TNS2Q63HR2 1409 aa21.81■■□□□ 1.08
SPTLC2-203ENST00000554901 EXOC5O00471 708 aa21.8■■□□□ 1.08
SPTLC2-203ENST00000554901 DDB1Q16531 1140 aa21.8■■□□□ 1.08
SPTLC2-203ENST00000554901 ZCRB1Q8TBF4 217 aaKnown RBP21.8■■□□□ 1.08
SPTLC2-203ENST00000554901 SEPT12Q8IYM1 358 aa21.8■■□□□ 1.08
SPTLC2-203ENST00000554901 FAM9BQ8IZU0 186 aa21.79■■□□□ 1.08
SPTLC2-203ENST00000554901 RUNDC1Q96C34 613 aa21.79■■□□□ 1.08
SPTLC2-203ENST00000554901 MAPK8IP3Q9UPT6 1336 aa21.79■■□□□ 1.08
SPTLC2-203ENST00000554901 PKD1L3Q7Z443 1732 aa21.78■■□□□ 1.08
SPTLC2-203ENST00000554901 A0A0G2JS52 829 aa21.78■■□□□ 1.08
SPTLC2-203ENST00000554901 MYT1Q01538 1121 aa21.78■■□□□ 1.08
SPTLC2-203ENST00000554901 LRRC37A3O60309 1634 aa21.77■■□□□ 1.08
SPTLC2-203ENST00000554901 GAS2L2Q8NHY3 880 aa21.77■■□□□ 1.08
SPTLC2-203ENST00000554901 PCDH11XQ9BZA7 1347 aa21.77■■□□□ 1.08
SPTLC2-203ENST00000554901 PCDH11YQ9BZA8 1340 aa21.77■■□□□ 1.08
SPTLC2-203ENST00000554901 PHACTR3Q96KR7 559 aa21.75■■□□□ 1.07
SPTLC2-203ENST00000554901 RGS12O14924 1447 aa21.75■■□□□ 1.07
SPTLC2-203ENST00000554901 PDE3BQ13370 1112 aa21.74■■□□□ 1.07
SPTLC2-203ENST00000554901 MTHFSDQ2M296 383 aaKnown RBP21.74■■□□□ 1.07
SPTLC2-203ENST00000554901 IFNL2Q8IZJ0 200 aa21.73■■□□□ 1.07
SPTLC2-203ENST00000554901 C1orf141Q5JVX7 400 aa21.72■■□□□ 1.07
SPTLC2-203ENST00000554901 ZNF530Q6P9A1 599 aaPredicted RBP21.72■■□□□ 1.07
SPTLC2-203ENST00000554901 CCDC146Q8IYE0 955 aa21.72■■□□□ 1.07
SPTLC2-203ENST00000554901 CYP27B1O15528 508 aa21.71■■□□□ 1.07
SPTLC2-203ENST00000554901 HSP90AB1P08238 724 aaKnown RBP21.71■■□□□ 1.07
SPTLC2-203ENST00000554901 NFE2L2Q16236 605 aa21.71■■□□□ 1.07
SPTLC2-203ENST00000554901 AKAP4Q5JQC9 854 aa21.71■■□□□ 1.07
SPTLC2-203ENST00000554901 PHKG2P15735 406 aa21.7■■□□□ 1.07
SPTLC2-203ENST00000554901 NCBP3Q53F19 620 aaKnown RBP21.7■■□□□ 1.07
SPTLC2-203ENST00000554901 KRT27Q7Z3Y8 459 aa21.7■■□□□ 1.07
SPTLC2-203ENST00000554901 SHANK3Q9BYB0 1731 aa21.7■■□□□ 1.06
SPTLC2-203ENST00000554901 NKX1-1Q15270 411 aaPredicted RBP21.7■■□□□ 1.06
SPTLC2-203ENST00000554901 NGEFQ8N5V2 710 aa21.7■■□□□ 1.06
SPTLC2-203ENST00000554901 DDX54Q8TDD1 881 aaKnown RBP21.7■■□□□ 1.06
SPTLC2-203ENST00000554901 BCL9O00512 1426 aa21.69■■□□□ 1.06
SPTLC2-203ENST00000554901 HTATSF1O43719 755 aaKnown RBP21.69■■□□□ 1.06
SPTLC2-203ENST00000554901 TMPOP42166 694 aaKnown RBP21.69■■□□□ 1.06
SPTLC2-203ENST00000554901 MARCH10Q8NA82 808 aaPredicted RBP21.69■■□□□ 1.06
SPTLC2-203ENST00000554901 APAF1O14727 1248 aa21.68■■□□□ 1.06
SPTLC2-203ENST00000554901 MAP3K5Q99683 1374 aa21.68■■□□□ 1.06
SPTLC2-203ENST00000554901 GNAT3A8MTJ3 354 aa21.67■■□□□ 1.06
SPTLC2-203ENST00000554901 LMOD3Q0VAK6 560 aa21.66■■□□□ 1.06
SPTLC2-203ENST00000554901 DCAF5Q96JK2 942 aa21.66■■□□□ 1.06
SPTLC2-203ENST00000554901 BRWD3Q6RI45 1802 aa21.65■■□□□ 1.06
SPTLC2-203ENST00000554901 RIPK4P57078 832 aa21.65■■□□□ 1.06
SPTLC2-203ENST00000554901 RTF1Q92541 710 aaKnown RBP21.64■■□□□ 1.05
SPTLC2-203ENST00000554901 FAM196AQ6ZSG2 479 aa21.63■■□□□ 1.05
SPTLC2-203ENST00000554901 CCDC27Q2M243 656 aa21.62■■□□□ 1.05
SPTLC2-203ENST00000554901 ADAMTS7Q9UKP4 1686 aa21.61■■□□□ 1.05
SPTLC2-203ENST00000554901 CEMIPQ8WUJ3 1361 aa21.61■■□□□ 1.05
SPTLC2-203ENST00000554901 ERVV-2B6SEH9 535 aa21.6■■□□□ 1.05
SPTLC2-203ENST00000554901 KDM6AO15550 1401 aaPredicted RBP21.6■■□□□ 1.05
SPTLC2-203ENST00000554901 MPRIPQ6WCQ1 1025 aa21.6■■□□□ 1.05
SPTLC2-203ENST00000554901 RNMTO43148 476 aaKnown RBP21.6■■□□□ 1.05
SPTLC2-203ENST00000554901 RRP7AQ9Y3A4 280 aaKnown RBP21.6■■□□□ 1.05
SPTLC2-203ENST00000554901 NEUROD2Q15784 382 aa21.59■■□□□ 1.05
SPTLC2-203ENST00000554901 IL17REQ8NFR9 667 aa21.59■■□□□ 1.05
SPTLC2-203ENST00000554901 DLG5Q8TDM6 1919 aa21.59■■□□□ 1.05
SPTLC2-203ENST00000554901 TRIM35Q9UPQ4 493 aa21.58■■□□□ 1.04
SPTLC2-203ENST00000554901 SCN11AQ9UI33 1791 aa21.57■■□□□ 1.04
SPTLC2-203ENST00000554901 CALD1Q05682 793 aaKnown RBP21.56■■□□□ 1.04
SPTLC2-203ENST00000554901 LGR6Q9HBX8 967 aa21.56■■□□□ 1.04
SPTLC2-203ENST00000554901 MRC1P22897 1456 aa21.56■■□□□ 1.04
SPTLC2-203ENST00000554901 FAM182BQ5T319 152 aa21.55■■□□□ 1.04
SPTLC2-203ENST00000554901 CABP4P57796 275 aa21.55■■□□□ 1.04
SPTLC2-203ENST00000554901 TEFQ10587 303 aa21.55■■□□□ 1.04
SPTLC2-203ENST00000554901 MCM10Q7L590 875 aa21.55■■□□□ 1.04
SPTLC2-203ENST00000554901 SLC52A2Q9HAB3 445 aa21.55■■□□□ 1.04
SPTLC2-203ENST00000554901 WWC1Q8IX03 1113 aa21.54■■□□□ 1.04
SPTLC2-203ENST00000554901 DOT1LQ8TEK3 1739 aa21.53■■□□□ 1.04
SPTLC2-203ENST00000554901 TOGARAM1Q9Y4F4 1720 aa21.53■■□□□ 1.04
SPTLC2-203ENST00000554901 PRIM1P49642 420 aaKnown RBP21.53■■□□□ 1.04
SPTLC2-203ENST00000554901 DCTN1Q14203 1278 aa21.53■■□□□ 1.04
SPTLC2-203ENST00000554901 TMOD3Q9NYL9 352 aa21.53■■□□□ 1.04
SPTLC2-203ENST00000554901 NHSQ6T4R5 1651 aa21.52■■□□□ 1.04
SPTLC2-203ENST00000554901 BCL11BQ9C0K0 894 aaPredicted RBP21.52■■□□□ 1.04
SPTLC2-203ENST00000554901 HNRNPUQ00839 825 aaKnown RBP eCLIP21.51■■□□□ 1.03
SPTLC2-203ENST00000554901 WDR63Q8IWG1 891 aa21.51■■□□□ 1.03
SPTLC2-203ENST00000554901 ACSBG1Q96GR2 724 aa21.51■■□□□ 1.03
SPTLC2-203ENST00000554901 BABAM1Q9NWV8 329 aa21.51■■□□□ 1.03
SPTLC2-203ENST00000554901 NFATC2IPQ8NCF5 419 aa21.5■■□□□ 1.03
SPTLC2-203ENST00000554901 SYTL4Q96C24 671 aaPredicted RBP21.5■■□□□ 1.03
SPTLC2-203ENST00000554901 VIRMAQ69YN4 1812 aaKnown RBP21.5■■□□□ 1.03
SPTLC2-203ENST00000554901 SBF2Q86WG5 1849 aa21.5■■□□□ 1.03
SPTLC2-203ENST00000554901 IL16Q14005 1332 aa21.5■■□□□ 1.03
SPTLC2-203ENST00000554901 ZNF521Q96K83 1311 aa21.5■■□□□ 1.03
SPTLC2-203ENST00000554901 TAF7Q15545 349 aaPredicted RBP21.5■■□□□ 1.03
SPTLC2-203ENST00000554901 PIGBQ92521 554 aa21.49■■□□□ 1.03
SPTLC2-203ENST00000554901 THUMPD2Q9BTF0 503 aaKnown RBP21.49■■□□□ 1.03
SPTLC2-203ENST00000554901 KCNQ2O43526 872 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms