RNA–Protein interactions for RNA: ENST00000554791.5

CGRRF1-202, Transcript of cell growth regulator with ring finger domain 1, humanhuman

TSL 5

Gene CGRRF1, Length 719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGRRF1-202ENST00000554791 SMG6Q86US8 1419 aaKnown RBP32.18■■■□□ 2.74
CGRRF1-202ENST00000554791 TFCP2L1Q9NZI6 479 aa32.18■■■□□ 2.74
CGRRF1-202ENST00000554791 USP47Q96K76 1375 aa32.18■■■□□ 2.74
CGRRF1-202ENST00000554791 FYB1O15117 783 aa32.17■■■□□ 2.74
CGRRF1-202ENST00000554791 KCNQ4P56696 695 aa32.17■■■□□ 2.74
CGRRF1-202ENST00000554791 SLC16A10Q8TF71 515 aa32.17■■■□□ 2.74
CGRRF1-202ENST00000554791 QSER1Q2KHR3 1735 aa32.17■■■□□ 2.74
CGRRF1-202ENST00000554791 SHANK3Q9BYB0 1731 aa32.17■■■□□ 2.74
CGRRF1-202ENST00000554791 POLD1P28340 1107 aa32.16■■■□□ 2.74
CGRRF1-202ENST00000554791 KLHL34Q8N239 644 aa32.16■■■□□ 2.74
CGRRF1-202ENST00000554791 USHBP1Q8N6Y0 703 aa32.16■■■□□ 2.74
CGRRF1-202ENST00000554791 PNPLA7Q6ZV29 1317 aa32.15■■■□□ 2.74
CGRRF1-202ENST00000554791 NBPF6Q5VWK0 638 aa32.14■■■□□ 2.74
CGRRF1-202ENST00000554791 RAPGEF4Q8WZA2 1011 aa32.14■■■□□ 2.74
CGRRF1-202ENST00000554791 NBPF4Q96M43 638 aa32.14■■■□□ 2.74
CGRRF1-202ENST00000554791 MAP3K5Q99683 1374 aa32.14■■■□□ 2.74
CGRRF1-202ENST00000554791 NSD2O96028 1365 aa32.13■■■□□ 2.73
CGRRF1-202ENST00000554791 LY75O60449 1722 aa32.12■■■□□ 2.73
CGRRF1-202ENST00000554791 CGNL1Q0VF96 1302 aa32.12■■■□□ 2.73
CGRRF1-202ENST00000554791 CCNL1Q9UK58 526 aaPredicted RBP32.12■■■□□ 2.73
CGRRF1-202ENST00000554791 CDCA8Q53HL2 280 aa32.11■■■□□ 2.73
CGRRF1-202ENST00000554791 ZNF784Q8NCA9 323 aaPredicted RBP32.11■■■□□ 2.73
CGRRF1-202ENST00000554791 KIF20BQ96Q89 1820 aa32.11■■■□□ 2.73
CGRRF1-202ENST00000554791 TUBGCP6Q96RT7 1819 aa32.11■■■□□ 2.73
CGRRF1-202ENST00000554791 UTRNP46939 3433 aa32.1■■■□□ 2.73
CGRRF1-202ENST00000554791 TATP17735 454 aaPredicted RBP32.1■■■□□ 2.73
CGRRF1-202ENST00000554791 CHD4Q14839 1912 aa32.1■■■□□ 2.73
CGRRF1-202ENST00000554791 GPR162Q16538 588 aa32.09■■■□□ 2.73
CGRRF1-202ENST00000554791 MSH5O43196 834 aa32.07■■■□□ 2.72
CGRRF1-202ENST00000554791 HSP90AB2PQ58FF8 381 aa32.06■■■□□ 2.72
CGRRF1-202ENST00000554791 INSRP06213 1382 aa32.06■■■□□ 2.72
CGRRF1-202ENST00000554791 FLT4P35916 1363 aa32.06■■■□□ 2.72
CGRRF1-202ENST00000554791 PELP1Q8IZL8 1130 aaKnown RBP32.04■■■□□ 2.72
CGRRF1-202ENST00000554791 PCDH11XQ9BZA7 1347 aa32.03■■■□□ 2.72
CGRRF1-202ENST00000554791 PCDH11YQ9BZA8 1340 aa32.03■■■□□ 2.72
CGRRF1-202ENST00000554791 TRIM26Q12899 539 aaPredicted RBP32.03■■■□□ 2.72
CGRRF1-202ENST00000554791 COL24A1Q17RW2 1714 aa32.02■■■□□ 2.72
CGRRF1-202ENST00000554791 KIF24Q5T7B8 1368 aa32.01■■■□□ 2.71
CGRRF1-202ENST00000554791 NSD3Q9BZ95 1437 aa31.99■■■□□ 2.71
CGRRF1-202ENST00000554791 MPRIPQ6WCQ1 1025 aa31.96■■■□□ 2.71
CGRRF1-202ENST00000554791 COL23A1Q86Y22 540 aaPredicted RBP31.96■■■□□ 2.71
CGRRF1-202ENST00000554791 EMILIN1Q9Y6C2 1016 aa31.96■■■□□ 2.71
CGRRF1-202ENST00000554791 C5P01031 1676 aa31.95■■■□□ 2.71
CGRRF1-202ENST00000554791 PPM1GO15355 546 aaPredicted RBP31.95■■■□□ 2.71
CGRRF1-202ENST00000554791 NLGN2Q8NFZ4 835 aa31.95■■■□□ 2.71
CGRRF1-202ENST00000554791 CARD14Q9BXL6 1004 aa31.95■■■□□ 2.71
CGRRF1-202ENST00000554791 PALLDQ8WX93 1383 aa31.94■■■□□ 2.7
CGRRF1-202ENST00000554791 HMGB2P26583 209 aaKnown RBP31.94■■■□□ 2.7
CGRRF1-202ENST00000554791 MSL1Q68DK7 614 aa31.92■■■□□ 2.7
CGRRF1-202ENST00000554791 CYP27B1O15528 508 aa31.91■■■□□ 2.7
CGRRF1-202ENST00000554791 FLAD1Q8NFF5 587 aa31.88■■■□□ 2.69
CGRRF1-202ENST00000554791 SMARCC1Q92922 1105 aaPredicted RBP31.88■■■□□ 2.69
CGRRF1-202ENST00000554791 PKD1L3Q7Z443 1732 aa31.87■■■□□ 2.69
CGRRF1-202ENST00000554791 TOGARAM1Q9Y4F4 1720 aa31.87■■■□□ 2.69
CGRRF1-202ENST00000554791 ITGB4P16144 1822 aa31.86■■■□□ 2.69
CGRRF1-202ENST00000554791 TAF1LQ8IZX4 1826 aa31.86■■■□□ 2.69
CGRRF1-202ENST00000554791 SPG7Q9UQ90 795 aa31.86■■■□□ 2.69
CGRRF1-202ENST00000554791 AK7Q96M32 723 aa31.85■■■□□ 2.69
CGRRF1-202ENST00000554791 POLR3GLQ9BT43 218 aa31.85■■■□□ 2.69
CGRRF1-202ENST00000554791 WASHC2AQ641Q2 1341 aa31.82■■■□□ 2.68
CGRRF1-202ENST00000554791 GRIN3BO60391 1043 aa31.82■■■□□ 2.68
CGRRF1-202ENST00000554791 C1QTNF8P60827 252 aa31.82■■■□□ 2.68
CGRRF1-202ENST00000554791 ANKRD26Q9UPS8 1709 aa31.82■■■□□ 2.68
CGRRF1-202ENST00000554791 C4BP0C0L5 1744 aa31.81■■■□□ 2.68
CGRRF1-202ENST00000554791 SENP3-EIF4A1A0A087X0R7 540 aa31.81■■■□□ 2.68
CGRRF1-202ENST00000554791 PIGBQ92521 554 aa31.81■■■□□ 2.68
CGRRF1-202ENST00000554791 TIMELESSQ9UNS1 1208 aa31.81■■■□□ 2.68
CGRRF1-202ENST00000554791 MAP2P11137 1827 aaKnown RBP31.81■■■□□ 2.68
CGRRF1-202ENST00000554791 NCAPD2Q15021 1401 aa31.81■■■□□ 2.68
CGRRF1-202ENST00000554791 YBX3P16989 372 aaKnown RBP eCLIP31.8■■■□□ 2.68
CGRRF1-202ENST00000554791 PHF14O94880 888 aa31.79■■■□□ 2.68
CGRRF1-202ENST00000554791 EYA1Q99502 592 aa31.79■■■□□ 2.68
CGRRF1-202ENST00000554791 NKX1-1Q15270 411 aaPredicted RBP31.78■■■□□ 2.68
CGRRF1-202ENST00000554791 GOLGB1Q14789 3259 aaKnown RBP31.78■■■□□ 2.68
CGRRF1-202ENST00000554791 GIGYF1O75420 1035 aaPredicted RBP31.77■■■□□ 2.68
CGRRF1-202ENST00000554791 TMOD3Q9NYL9 352 aa31.77■■■□□ 2.68
CGRRF1-202ENST00000554791 CD2APQ9Y5K6 639 aa31.76■■■□□ 2.67
CGRRF1-202ENST00000554791 TNNT2P45379 298 aaPredicted RBP31.75■■■□□ 2.67
CGRRF1-202ENST00000554791 POLKQ9UBT6 870 aa31.75■■■□□ 2.67
CGRRF1-202ENST00000554791 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.74■■■□□ 2.671e-7■□□□□ 9.8
CGRRF1-202ENST00000554791 LOC102724428A0A0B4J2F2 783 aa31.73■■■□□ 2.67
CGRRF1-202ENST00000554791 SIK1P57059 783 aa31.73■■■□□ 2.67
CGRRF1-202ENST00000554791 IFNL2Q8IZJ0 200 aa31.73■■■□□ 2.67
CGRRF1-202ENST00000554791 UBR3Q6ZT12 1888 aa31.72■■■□□ 2.67
CGRRF1-202ENST00000554791 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.72■■■□□ 2.67
CGRRF1-202ENST00000554791 AMIGO3Q86WK7 504 aa31.71■■■□□ 2.67
CGRRF1-202ENST00000554791 PCGF6Q9BYE7 350 aa31.71■■■□□ 2.67
CGRRF1-202ENST00000554791 PHKG2P15735 406 aa31.7■■■□□ 2.67
CGRRF1-202ENST00000554791 SMIM5Q71RC9 77 aa31.7■■■□□ 2.67
CGRRF1-202ENST00000554791 SSFA2P28290 1259 aa31.69■■■□□ 2.66
CGRRF1-202ENST00000554791 EIF4A2Q14240 407 aaKnown RBP31.69■■■□□ 2.66
CGRRF1-202ENST00000554791 LINC00116Q8NCU8 138 aa31.69■■■□□ 2.66
CGRRF1-202ENST00000554791 ASAP1Q9ULH1 1129 aa31.69■■■□□ 2.66
CGRRF1-202ENST00000554791 CLSPNQ9HAW4 1339 aa31.68■■■□□ 2.66
CGRRF1-202ENST00000554791 ATP6V1AP38606 617 aa31.67■■■□□ 2.66
CGRRF1-202ENST00000554791 GNPATO15228 680 aa31.65■■■□□ 2.66
CGRRF1-202ENST00000554791 ITPK1Q13572 414 aa31.63■■■□□ 2.65
CGRRF1-202ENST00000554791 IGSF1Q8N6C5 1336 aa31.61■■■□□ 2.65
CGRRF1-202ENST00000554791 EIF4G2P78344 907 aaKnown RBP eCLIP31.61■■■□□ 2.65
CGRRF1-202ENST00000554791 ATG3Q9NT62 314 aa31.61■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms