RNA–Protein interactions for RNA: ENST00000554722.1

GABRB3-207, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 3

Gene GABRB3, Length 406 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-207ENST00000554722 NBPF4Q96M43 638 aa21.77■■□□□ 1.08
GABRB3-207ENST00000554722 DDX54Q8TDD1 881 aaKnown RBP21.76■■□□□ 1.07
GABRB3-207ENST00000554722 ATF5Q9Y2D1 282 aaPredicted RBP21.76■■□□□ 1.07
GABRB3-207ENST00000554722 EMILIN1Q9Y6C2 1016 aa21.76■■□□□ 1.07
GABRB3-207ENST00000554722 MEGF6O75095 1541 aa21.75■■□□□ 1.07
GABRB3-207ENST00000554722 YY1P25490 414 aa21.75■■□□□ 1.07
GABRB3-207ENST00000554722 USHBP1Q8N6Y0 703 aa21.75■■□□□ 1.07
GABRB3-207ENST00000554722 PTGER2P43116 358 aa21.74■■□□□ 1.07
GABRB3-207ENST00000554722 MTFR1LQ9H019 292 aa21.74■■□□□ 1.07
GABRB3-207ENST00000554722 DOT1LQ8TEK3 1739 aa21.73■■□□□ 1.07
GABRB3-207ENST00000554722 INSRP06213 1382 aa21.73■■□□□ 1.07
GABRB3-207ENST00000554722 FLT4P35916 1363 aa21.73■■□□□ 1.07
GABRB3-207ENST00000554722 PANK3Q9H999 370 aa21.72■■□□□ 1.07
GABRB3-207ENST00000554722 CGNL1Q0VF96 1302 aa21.71■■□□□ 1.07
GABRB3-207ENST00000554722 SLC27A3Q5K4L6 730 aa21.69■■□□□ 1.06
GABRB3-207ENST00000554722 ZCRB1Q8TBF4 217 aaKnown RBP21.69■■□□□ 1.06
GABRB3-207ENST00000554722 KIF24Q5T7B8 1368 aa21.69■■□□□ 1.06
GABRB3-207ENST00000554722 SYTL4Q96C24 671 aaPredicted RBP21.68■■□□□ 1.06
GABRB3-207ENST00000554722 LRRC4BQ9NT99 713 aa21.68■■□□□ 1.06
GABRB3-207ENST00000554722 PAPPAQ13219 1627 aa21.67■■□□□ 1.06
GABRB3-207ENST00000554722 SMG6Q86US8 1419 aaKnown RBP21.67■■□□□ 1.06
GABRB3-207ENST00000554722 PPM1GO15355 546 aaPredicted RBP21.67■■□□□ 1.06
GABRB3-207ENST00000554722 ZNF827Q17R98 1081 aa21.67■■□□□ 1.06
GABRB3-207ENST00000554722 TNNT2P45379 298 aaPredicted RBP21.66■■□□□ 1.06
GABRB3-207ENST00000554722 PRIM1P49642 420 aaKnown RBP21.66■■□□□ 1.06
GABRB3-207ENST00000554722 SGIP1Q9BQI5 828 aa21.66■■□□□ 1.06
GABRB3-207ENST00000554722 FHDC1Q9C0D6 1143 aaPredicted RBP21.66■■□□□ 1.06
GABRB3-207ENST00000554722 POLKQ9UBT6 870 aa21.66■■□□□ 1.06
GABRB3-207ENST00000554722 WASHC2AQ641Q2 1341 aa21.64■■□□□ 1.05
GABRB3-207ENST00000554722 RAPGEF4Q8WZA2 1011 aa21.64■■□□□ 1.05
GABRB3-207ENST00000554722 AKT1S1Q96B36 256 aa21.64■■□□□ 1.05
GABRB3-207ENST00000554722 ARXQ96QS3 562 aa21.64■■□□□ 1.05
GABRB3-207ENST00000554722 SYT17Q9BSW7 474 aa21.64■■□□□ 1.05
GABRB3-207ENST00000554722 PKD1L3Q7Z443 1732 aa21.63■■□□□ 1.05
GABRB3-207ENST00000554722 KIF7Q2M1P5 1343 aa21.63■■□□□ 1.05
GABRB3-207ENST00000554722 ITGB4P16144 1822 aa21.62■■□□□ 1.05
GABRB3-207ENST00000554722 SLC16A10Q8TF71 515 aa21.62■■□□□ 1.05
GABRB3-207ENST00000554722 LY75O60449 1722 aa21.62■■□□□ 1.05
GABRB3-207ENST00000554722 NCAPD2Q15021 1401 aa21.62■■□□□ 1.05
GABRB3-207ENST00000554722 NSD2O96028 1365 aa21.61■■□□□ 1.05
GABRB3-207ENST00000554722 TOGARAM1Q9Y4F4 1720 aa21.61■■□□□ 1.05
GABRB3-207ENST00000554722 TATP17735 454 aaPredicted RBP21.61■■□□□ 1.05
GABRB3-207ENST00000554722 EYA1Q99502 592 aa21.6■■□□□ 1.05
GABRB3-207ENST00000554722 TFCP2L1Q9NZI6 479 aa21.6■■□□□ 1.05
GABRB3-207ENST00000554722 TUBGCP6Q96RT7 1819 aa21.59■■□□□ 1.05
GABRB3-207ENST00000554722 POLD1P28340 1107 aa21.58■■□□□ 1.05
GABRB3-207ENST00000554722 MAP3K5Q99683 1374 aa21.58■■□□□ 1.04
GABRB3-207ENST00000554722 KCNQ4P56696 695 aa21.57■■□□□ 1.04
GABRB3-207ENST00000554722 EIF4A2Q14240 407 aaKnown RBP21.57■■□□□ 1.04
GABRB3-207ENST00000554722 CCNL1Q9UK58 526 aaPredicted RBP21.57■■□□□ 1.04
GABRB3-207ENST00000554722 PNPLA7Q6ZV29 1317 aa21.56■■□□□ 1.04
GABRB3-207ENST00000554722 CYP27B1O15528 508 aa21.56■■□□□ 1.04
GABRB3-207ENST00000554722 PCDH11XQ9BZA7 1347 aa21.55■■□□□ 1.04
GABRB3-207ENST00000554722 PCDH11YQ9BZA8 1340 aa21.55■■□□□ 1.04
GABRB3-207ENST00000554722 AMER1Q5JTC6 1135 aaPredicted RBP21.54■■□□□ 1.04
GABRB3-207ENST00000554722 QSER1Q2KHR3 1735 aa21.53■■□□□ 1.04
GABRB3-207ENST00000554722 HMGB2P26583 209 aaKnown RBP21.53■■□□□ 1.04
GABRB3-207ENST00000554722 MORC1Q86VD1 984 aa21.53■■□□□ 1.04
GABRB3-207ENST00000554722 KNSTRNQ9Y448 316 aa21.53■■□□□ 1.04
GABRB3-207ENST00000554722 UTRNP46939 3433 aa21.51■■□□□ 1.03
GABRB3-207ENST00000554722 TAF1LQ8IZX4 1826 aa21.51■■□□□ 1.03
GABRB3-207ENST00000554722 PER1O15534 1290 aaPredicted RBP21.51■■□□□ 1.03
GABRB3-207ENST00000554722 KLHL34Q8N239 644 aa21.51■■□□□ 1.03
GABRB3-207ENST00000554722 MSH5O43196 834 aa21.5■■□□□ 1.03
GABRB3-207ENST00000554722 IGSF1Q8N6C5 1336 aa21.49■■□□□ 1.03
GABRB3-207ENST00000554722 GPR162Q16538 588 aa21.48■■□□□ 1.03
GABRB3-207ENST00000554722 MPRIPQ6WCQ1 1025 aa21.48■■□□□ 1.03
GABRB3-207ENST00000554722 C5P01031 1676 aa21.47■■□□□ 1.03
GABRB3-207ENST00000554722 NKX1-1Q15270 411 aaPredicted RBP21.46■■□□□ 1.03
GABRB3-207ENST00000554722 ZNF784Q8NCA9 323 aaPredicted RBP21.46■■□□□ 1.03
GABRB3-207ENST00000554722 SMARCC1Q92922 1105 aaPredicted RBP21.46■■□□□ 1.03
GABRB3-207ENST00000554722 SPG7Q9UQ90 795 aa21.46■■□□□ 1.03
GABRB3-207ENST00000554722 PALLDQ8WX93 1383 aa21.46■■□□□ 1.03
GABRB3-207ENST00000554722 COL23A1Q86Y22 540 aaPredicted RBP21.45■■□□□ 1.02
GABRB3-207ENST00000554722 COL24A1Q17RW2 1714 aa21.44■■□□□ 1.02
GABRB3-207ENST00000554722 CC2D1BQ5T0F9 858 aaKnown RBP21.44■■□□□ 1.02
GABRB3-207ENST00000554722 AEBP1Q8IUX7 1158 aa21.44■■□□□ 1.02
GABRB3-207ENST00000554722 FLAD1Q8NFF5 587 aa21.44■■□□□ 1.02
GABRB3-207ENST00000554722 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.44■■□□□ 1.02
GABRB3-207ENST00000554722 PHKG2P15735 406 aa21.43■■□□□ 1.02
GABRB3-207ENST00000554722 VIRMAQ69YN4 1812 aaKnown RBP21.42■■□□□ 1.02
GABRB3-207ENST00000554722 PELP1Q8IZL8 1130 aaKnown RBP21.42■■□□□ 1.02
GABRB3-207ENST00000554722 PIGBQ92521 554 aa21.42■■□□□ 1.02
GABRB3-207ENST00000554722 IL13P35225 146 aa21.41■■□□□ 1.02
GABRB3-207ENST00000554722 IFNL2Q8IZJ0 200 aa21.41■■□□□ 1.02
GABRB3-207ENST00000554722 MTHFSP49914 203 aa21.4■■□□□ 1.02
GABRB3-207ENST00000554722 CNGB1Q14028 1251 aaPredicted RBP21.4■■□□□ 1.02
GABRB3-207ENST00000554722 NLGN2Q8NFZ4 835 aa21.4■■□□□ 1.02
GABRB3-207ENST00000554722 CHD4Q14839 1912 aa21.39■■□□□ 1.02
GABRB3-207ENST00000554722 MSL1Q68DK7 614 aa21.39■■□□□ 1.01
GABRB3-207ENST00000554722 AK7Q96M32 723 aa21.39■■□□□ 1.01
GABRB3-207ENST00000554722 GOLGB1Q14789 3259 aaKnown RBP21.38■■□□□ 1.01
GABRB3-207ENST00000554722 SULT6B1Q6IMI4 303 aa21.37■■□□□ 1.01
GABRB3-207ENST00000554722 TMOD3Q9NYL9 352 aa21.37■■□□□ 1.01
GABRB3-207ENST00000554722 C4BP0C0L5 1744 aa21.37■■□□□ 1.01
GABRB3-207ENST00000554722 UBR3Q6ZT12 1888 aa21.37■■□□□ 1.01
GABRB3-207ENST00000554722 KDRP35968 1356 aa21.36■■□□□ 1.01
GABRB3-207ENST00000554722 ASAP1Q9ULH1 1129 aa21.35■■□□□ 1.01
GABRB3-207ENST00000554722 KDM6AO15550 1401 aaPredicted RBP21.35■■□□□ 1.01
GABRB3-207ENST00000554722 SCN11AQ9UI33 1791 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms