RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 RUSC2Q8N2Y8 1516 aa7.18□□□□□ -1.26
VTI1B-203ENST00000554636 ZBBXA8MT70 800 aa7.18□□□□□ -1.26
VTI1B-203ENST00000554636 SCARF1Q14162 830 aa7.18□□□□□ -1.26
VTI1B-203ENST00000554636 INTS6LQ5JSJ4 861 aaKnown RBP7.18□□□□□ -1.26
VTI1B-203ENST00000554636 PPP1R26Q5T8A7 1209 aaPredicted RBP7.18□□□□□ -1.26
VTI1B-203ENST00000554636 CYB5RLQ6IPT4 315 aa7.18□□□□□ -1.26
VTI1B-203ENST00000554636 TBC1D2BQ9UPU7 963 aa7.18□□□□□ -1.26
VTI1B-203ENST00000554636 CUL7Q14999 1698 aa7.17□□□□□ -1.26
VTI1B-203ENST00000554636 CBLBQ13191 982 aa7.17□□□□□ -1.26
VTI1B-203ENST00000554636 NBPF20Q3BBV1 942 aa7.17□□□□□ -1.26
VTI1B-203ENST00000554636 KIFC2Q96AC6 838 aa7.17□□□□□ -1.26
VTI1B-203ENST00000554636 CDV3Q9UKY7 258 aaKnown RBP7.17□□□□□ -1.26
VTI1B-203ENST00000554636 EMILIN1Q9Y6C2 1016 aa7.17□□□□□ -1.26
VTI1B-203ENST00000554636 SOBPA7XYQ1 873 aa7.16□□□□□ -1.26
VTI1B-203ENST00000554636 APBB1O00213 710 aa7.16□□□□□ -1.26
VTI1B-203ENST00000554636 BMP2P12643 396 aa7.16□□□□□ -1.26
VTI1B-203ENST00000554636 TMPRSS4Q9NRS4 437 aa7.16□□□□□ -1.26
VTI1B-203ENST00000554636 PGPEP1Q9NXJ5 209 aa7.16□□□□□ -1.26
VTI1B-203ENST00000554636 IGF1RP08069 1367 aa7.16□□□□□ -1.26
VTI1B-203ENST00000554636 GPR37L1O60883 481 aa7.15□□□□□ -1.26
VTI1B-203ENST00000554636 UPP2O95045 317 aa7.15□□□□□ -1.26
VTI1B-203ENST00000554636 LINC00528Q8N1L1 170 aa7.15□□□□□ -1.26
VTI1B-203ENST00000554636 MEIOBQ8N635 442 aa7.15□□□□□ -1.26
VTI1B-203ENST00000554636 DHX9Q08211 1270 aaKnown RBP7.14□□□□□ -1.27
VTI1B-203ENST00000554636 ERVH48-1M5A8F1 160 aa7.13□□□□□ -1.27
VTI1B-203ENST00000554636 GIGYF1O75420 1035 aaPredicted RBP7.13□□□□□ -1.27
VTI1B-203ENST00000554636 ABL2P42684 1182 aa7.13□□□□□ -1.27
VTI1B-203ENST00000554636 NR1H3Q13133 447 aa7.13□□□□□ -1.27
VTI1B-203ENST00000554636 ZNF784Q8NCA9 323 aaPredicted RBP7.13□□□□□ -1.27
VTI1B-203ENST00000554636 AGBL1Q96MI9 1066 aa7.13□□□□□ -1.27
VTI1B-203ENST00000554636 VEGFBP49765 207 aa7.12□□□□□ -1.27
VTI1B-203ENST00000554636 GDPD2Q9HCC8 539 aa7.12□□□□□ -1.27
VTI1B-203ENST00000554636 CYLDQ9NQC7 956 aa7.12□□□□□ -1.27
VTI1B-203ENST00000554636 KIAA0586Q9BVV6 1533 aa7.11□□□□□ -1.27
VTI1B-203ENST00000554636 CARMIL1Q5VZK9 1371 aa7.11□□□□□ -1.27
VTI1B-203ENST00000554636 SOCS7O14512 581 aa7.11□□□□□ -1.27
VTI1B-203ENST00000554636 MAN1A2O60476 641 aa7.11□□□□□ -1.27
VTI1B-203ENST00000554636 RELBQ01201 579 aa7.11□□□□□ -1.27
VTI1B-203ENST00000554636 MCM6Q14566 821 aa7.11□□□□□ -1.27
VTI1B-203ENST00000554636 PRM3Q9NNZ6 103 aa7.11□□□□□ -1.27
VTI1B-203ENST00000554636 PRG4Q92954 1404 aaPredicted RBP7.1□□□□□ -1.27
VTI1B-203ENST00000554636 ESPNB1AK53 854 aa7.1□□□□□ -1.27
VTI1B-203ENST00000554636 TSEN34Q9BSV6 310 aaKnown RBP7.1□□□□□ -1.27
VTI1B-203ENST00000554636 ZNF330Q9Y3S2 320 aaPredicted RBP7.1□□□□□ -1.27
VTI1B-203ENST00000554636 VAC14Q08AM6 782 aa7.09□□□□□ -1.27
VTI1B-203ENST00000554636 Q6ZVU0 165 aa7.09□□□□□ -1.27
VTI1B-203ENST00000554636 ZNF395Q9H8N7 513 aaPredicted RBP7.09□□□□□ -1.27
VTI1B-203ENST00000554636 FIGNL2A6NMB9 653 aa7.08□□□□□ -1.28
VTI1B-203ENST00000554636 WFS1O76024 890 aa7.08□□□□□ -1.28
VTI1B-203ENST00000554636 ADD1P35611 737 aaKnown RBP7.08□□□□□ -1.28
VTI1B-203ENST00000554636 IRF5Q13568 498 aa7.08□□□□□ -1.28
VTI1B-203ENST00000554636 RAPGEF2Q9Y4G8 1499 aa7.07□□□□□ -1.28
VTI1B-203ENST00000554636 TERTO14746 1132 aaKnown RBP7.07□□□□□ -1.28
VTI1B-203ENST00000554636 LILRA1O75019 489 aa7.07□□□□□ -1.28
VTI1B-203ENST00000554636 TREML4Q6UXN2 200 aa7.07□□□□□ -1.28
VTI1B-203ENST00000554636 INSM2Q96T92 566 aaPredicted RBP7.07□□□□□ -1.28
VTI1B-203ENST00000554636 POLMQ9NP87 494 aaPredicted RBP7.07□□□□□ -1.28
VTI1B-203ENST00000554636 DNMT3LQ9UJW3 386 aa7.07□□□□□ -1.28
VTI1B-203ENST00000554636 PCDHB11Q9Y5F2 797 aa7.07□□□□□ -1.28
VTI1B-203ENST00000554636 SOS2Q07890 1332 aaPredicted RBP7.06□□□□□ -1.28
VTI1B-203ENST00000554636 TTLL8A6PVC2 850 aa7.06□□□□□ -1.28
VTI1B-203ENST00000554636 ADH1AP07327 375 aa7.06□□□□□ -1.28
VTI1B-203ENST00000554636 NFX1Q12986 1120 aaKnown RBP7.06□□□□□ -1.28
VTI1B-203ENST00000554636 SEPT12Q8IYM1 358 aa7.06□□□□□ -1.28
VTI1B-203ENST00000554636 NXF1Q9UBU9 619 aaKnown RBP7.06□□□□□ -1.28
VTI1B-203ENST00000554636 IQGAP2Q13576 1575 aa7.06□□□□□ -1.28
VTI1B-203ENST00000554636 ADCY10Q96PN6 1610 aa7.05□□□□□ -1.28
VTI1B-203ENST00000554636 CTSOP43234 321 aaPredicted RBP7.05□□□□□ -1.28
VTI1B-203ENST00000554636 RNF20Q5VTR2 975 aa7.05□□□□□ -1.28
VTI1B-203ENST00000554636 POM121Q96HA1 1249 aa7.05□□□□□ -1.28
VTI1B-203ENST00000554636 UGGT2Q9NYU1 1516 aa7.05□□□□□ -1.28
VTI1B-203ENST00000554636 PRXQ9BXM0 1461 aa7.04□□□□□ -1.28
VTI1B-203ENST00000554636 SPINT1O43278 529 aa7.04□□□□□ -1.28
VTI1B-203ENST00000554636 SCTRP47872 440 aa7.04□□□□□ -1.28
VTI1B-203ENST00000554636 EIF4G2P78344 907 aaKnown RBP eCLIP7.04□□□□□ -1.28
VTI1B-203ENST00000554636 COG6Q9Y2V7 657 aa7.04□□□□□ -1.28
VTI1B-203ENST00000554636 DISP1Q96F81 1524 aa7.04□□□□□ -1.28
VTI1B-203ENST00000554636 CTTNBP2Q8WZ74 1663 aa7.03□□□□□ -1.28
VTI1B-203ENST00000554636 MCCD1P59942 119 aaPredicted RBP7.03□□□□□ -1.28
VTI1B-203ENST00000554636 TMEM132AQ24JP5 1023 aa7.03□□□□□ -1.28
VTI1B-203ENST00000554636 LCE2CQ5TA81 110 aa7.03□□□□□ -1.28
VTI1B-203ENST00000554636 ZNF592Q92610 1267 aa7.03□□□□□ -1.28
VTI1B-203ENST00000554636 CEP126Q9P2H0 1117 aa7.03□□□□□ -1.28
VTI1B-203ENST00000554636 MAPKBP1O60336 1514 aa7.02□□□□□ -1.29
VTI1B-203ENST00000554636 KIAA0556O60303 1618 aa7.02□□□□□ -1.29
VTI1B-203ENST00000554636 KIF13AQ9H1H9 1805 aa7.02□□□□□ -1.29
VTI1B-203ENST00000554636 ATP5J2-PTCD1G3V325 749 aa7.02□□□□□ -1.29
VTI1B-203ENST00000554636 MEN1O00255 615 aa7.02□□□□□ -1.29
VTI1B-203ENST00000554636 UBTFP17480 764 aaKnown RBP7.02□□□□□ -1.29
VTI1B-203ENST00000554636 PTGIRP43119 386 aa7.02□□□□□ -1.29
VTI1B-203ENST00000554636 CC2D2BQ6DHV5 1058 aa7.02□□□□□ -1.29
VTI1B-203ENST00000554636 SLC16A10Q8TF71 515 aa7.02□□□□□ -1.29
VTI1B-203ENST00000554636 CDCA7Q9BWT1 371 aaPredicted RBP7.02□□□□□ -1.29
VTI1B-203ENST00000554636 ESF1Q9H501 851 aaKnown RBP7.02□□□□□ -1.29
VTI1B-203ENST00000554636 TNIKQ9UKE5 1360 aa7.02□□□□□ -1.29
VTI1B-203ENST00000554636 ERVK-9P63128 1117 aa7.01□□□□□ -1.29
VTI1B-203ENST00000554636 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.01□□□□□ -1.294e-11■■■□□ 14.9
VTI1B-203ENST00000554636 SLFNL1Q499Z3 407 aa7.01□□□□□ -1.29
VTI1B-203ENST00000554636 LCE2AQ5TA79 106 aaPredicted RBP7.01□□□□□ -1.29
VTI1B-203ENST00000554636 KDF1Q8NAX2 398 aaPredicted RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms