RNA–Protein interactions for RNA: ENST00000554627.5

MARK3-208, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 1,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-208ENST00000554627 AMOTQ4VCS5 1084 aa12.7□□□□□ -0.38
MARK3-208ENST00000554627 GAS2L2Q8NHY3 880 aa12.7□□□□□ -0.38
MARK3-208ENST00000554627 ZBED9Q6R2W3 1325 aa12.7□□□□□ -0.38
MARK3-208ENST00000554627 APAF1O14727 1248 aa12.69□□□□□ -0.38
MARK3-208ENST00000554627 LMOD3Q0VAK6 560 aa12.69□□□□□ -0.38
MARK3-208ENST00000554627 VPS72Q15906 364 aa12.69□□□□□ -0.38
MARK3-208ENST00000554627 TCP11L2Q8N4U5 519 aa12.69□□□□□ -0.38
MARK3-208ENST00000554627 CDCA7Q9BWT1 371 aaPredicted RBP12.69□□□□□ -0.38
MARK3-208ENST00000554627 SPATA31A1Q5TZJ5 1347 aa12.69□□□□□ -0.38
MARK3-208ENST00000554627 SPATA31A5Q5VU36 1347 aa12.69□□□□□ -0.38
MARK3-208ENST00000554627 SPATA31A7Q8IWB4 1347 aa12.69□□□□□ -0.38
MARK3-208ENST00000554627 THSD7AQ9UPZ6 1657 aa12.69□□□□□ -0.38
MARK3-208ENST00000554627 IL2RBP14784 551 aa12.69□□□□□ -0.38
MARK3-208ENST00000554627 NFE2L2Q16236 605 aa12.69□□□□□ -0.38
MARK3-208ENST00000554627 PLEKHO1Q53GL0 409 aaPredicted RBP12.69□□□□□ -0.38
MARK3-208ENST00000554627 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.69□□□□□ -0.385e-7■■□□□ 13.6
MARK3-208ENST00000554627 CCDC9Q9Y3X0 531 aaKnown RBP12.69□□□□□ -0.38
MARK3-208ENST00000554627 DISP2A7MBM2 1401 aa12.68□□□□□ -0.38
MARK3-208ENST00000554627 ATRNO75882 1429 aa12.68□□□□□ -0.38
MARK3-208ENST00000554627 ADAMTS7Q9UKP4 1686 aa12.68□□□□□ -0.38
MARK3-208ENST00000554627 GLI3P10071 1580 aa12.68□□□□□ -0.38
MARK3-208ENST00000554627 TMPOP42166 694 aaKnown RBP12.68□□□□□ -0.38
MARK3-208ENST00000554627 SPG7Q9UQ90 795 aa12.68□□□□□ -0.38
MARK3-208ENST00000554627 SIPA1L3O60292 1781 aaPredicted RBP12.68□□□□□ -0.38
MARK3-208ENST00000554627 CACNB1Q02641 598 aaPredicted RBP12.67□□□□□ -0.38
MARK3-208ENST00000554627 CCDC27Q2M243 656 aa12.67□□□□□ -0.38
MARK3-208ENST00000554627 ZNF772Q68DY9 489 aaPredicted RBP12.67□□□□□ -0.38
MARK3-208ENST00000554627 PHACTR3Q96KR7 559 aa12.67□□□□□ -0.38
MARK3-208ENST00000554627 USP35Q9P2H5 1018 aa12.67□□□□□ -0.38
MARK3-208ENST00000554627 TRPC5Q9UL62 973 aaPredicted RBP12.67□□□□□ -0.38
MARK3-208ENST00000554627 ITGB4P16144 1822 aa12.66□□□□□ -0.38
MARK3-208ENST00000554627 MAPK8IP2Q13387 824 aaPredicted RBP12.66□□□□□ -0.38
MARK3-208ENST00000554627 TNS2Q63HR2 1409 aa12.66□□□□□ -0.38
MARK3-208ENST00000554627 BARGINQ6ZT62 677 aa12.66□□□□□ -0.38
MARK3-208ENST00000554627 PCDH11XQ9BZA7 1347 aa12.66□□□□□ -0.38
MARK3-208ENST00000554627 PCDH11YQ9BZA8 1340 aa12.66□□□□□ -0.38
MARK3-208ENST00000554627 MAP3K5Q99683 1374 aa12.66□□□□□ -0.38
MARK3-208ENST00000554627 RIPK4P57078 832 aa12.65□□□□□ -0.38
MARK3-208ENST00000554627 C1orf141Q5JVX7 400 aa12.65□□□□□ -0.38
MARK3-208ENST00000554627 BRWD3Q6RI45 1802 aa12.65□□□□□ -0.38
MARK3-208ENST00000554627 HTATSF1O43719 755 aaKnown RBP12.64□□□□□ -0.39
MARK3-208ENST00000554627 CALD1Q05682 793 aaKnown RBP12.64□□□□□ -0.39
MARK3-208ENST00000554627 NEUROD2Q15784 382 aa12.64□□□□□ -0.39
MARK3-208ENST00000554627 MTHFSDQ2M296 383 aaKnown RBP12.64□□□□□ -0.39
MARK3-208ENST00000554627 RTF1Q92541 710 aaKnown RBP12.64□□□□□ -0.39
MARK3-208ENST00000554627 DOT1LQ8TEK3 1739 aa12.64□□□□□ -0.39
MARK3-208ENST00000554627 GNAT3A8MTJ3 354 aa12.64□□□□□ -0.39
MARK3-208ENST00000554627 AKAP4Q5JQC9 854 aa12.64□□□□□ -0.39
MARK3-208ENST00000554627 ZNF530Q6P9A1 599 aaPredicted RBP12.64□□□□□ -0.39
MARK3-208ENST00000554627 ZCRB1Q8TBF4 217 aaKnown RBP12.64□□□□□ -0.39
MARK3-208ENST00000554627 RRP7AQ9Y3A4 280 aaKnown RBP12.64□□□□□ -0.39
MARK3-208ENST00000554627 HSP90AB1P08238 724 aaKnown RBP12.63□□□□□ -0.39
MARK3-208ENST00000554627 PDE3BQ13370 1112 aa12.63□□□□□ -0.39
MARK3-208ENST00000554627 KDM3BQ7LBC6 1761 aa12.62□□□□□ -0.39
MARK3-208ENST00000554627 WWC1Q8IX03 1113 aa12.62□□□□□ -0.39
MARK3-208ENST00000554627 IFNL2Q8IZJ0 200 aa12.62□□□□□ -0.39
MARK3-208ENST00000554627 GJD4Q96KN9 370 aaPredicted RBP12.62□□□□□ -0.39
MARK3-208ENST00000554627 SALL2Q9Y467 1007 aaPredicted RBP12.62□□□□□ -0.39
MARK3-208ENST00000554627 TOGARAM1Q9Y4F4 1720 aa12.62□□□□□ -0.39
MARK3-208ENST00000554627 SBF2Q86WG5 1849 aa12.62□□□□□ -0.39
MARK3-208ENST00000554627 WDR63Q8IWG1 891 aa12.61□□□□□ -0.39
MARK3-208ENST00000554627 ZNF521Q96K83 1311 aa12.61□□□□□ -0.39
MARK3-208ENST00000554627 CACNA1FO60840 1977 aa12.61□□□□□ -0.39
MARK3-208ENST00000554627 EXOC5O00471 708 aa12.6□□□□□ -0.39
MARK3-208ENST00000554627 DDB1Q16531 1140 aa12.6□□□□□ -0.39
MARK3-208ENST00000554627 QTRT2Q9H974 415 aaKnown RBP12.6□□□□□ -0.39
MARK3-208ENST00000554627 TRIM35Q9UPQ4 493 aa12.6□□□□□ -0.39
MARK3-208ENST00000554627 IL16Q14005 1332 aa12.6□□□□□ -0.39
MARK3-208ENST00000554627 MRC1P22897 1456 aa12.6□□□□□ -0.39
MARK3-208ENST00000554627 PHKG2P15735 406 aa12.6□□□□□ -0.39
MARK3-208ENST00000554627 GOLGA2Q08379 1002 aa12.6□□□□□ -0.39
MARK3-208ENST00000554627 FAM98CQ17RN3 349 aaKnown RBP12.6□□□□□ -0.39
MARK3-208ENST00000554627 SENP3-EIF4A1A0A087X0R7 540 aa12.59□□□□□ -0.39
MARK3-208ENST00000554627 A0A0G2JS52 829 aa12.59□□□□□ -0.39
MARK3-208ENST00000554627 MYT1Q01538 1121 aa12.59□□□□□ -0.39
MARK3-208ENST00000554627 PAPPAQ13219 1627 aa12.58□□□□□ -0.4
MARK3-208ENST00000554627 CEMIPQ8WUJ3 1361 aa12.58□□□□□ -0.4
MARK3-208ENST00000554627 CENPBP07199 599 aaPredicted RBP12.58□□□□□ -0.4
MARK3-208ENST00000554627 RBM6P78332 1123 aaKnown RBP12.58□□□□□ -0.4
MARK3-208ENST00000554627 ILDR1Q86SU0 546 aaPredicted RBP12.58□□□□□ -0.4
MARK3-208ENST00000554627 DCAF5Q96JK2 942 aa12.58□□□□□ -0.4
MARK3-208ENST00000554627 E9PSI1 815 aa12.57□□□□□ -0.4
MARK3-208ENST00000554627 CYP27B1O15528 508 aa12.57□□□□□ -0.4
MARK3-208ENST00000554627 MYH16Q9H6N6 1097 aa12.57□□□□□ -0.4
MARK3-208ENST00000554627 UBR2Q8IWV8 1755 aa12.57□□□□□ -0.4
MARK3-208ENST00000554627 NHSQ6T4R5 1651 aa12.57□□□□□ -0.4
MARK3-208ENST00000554627 KDM6AO15550 1401 aaPredicted RBP12.57□□□□□ -0.4
MARK3-208ENST00000554627 ONECUT3O60422 494 aaPredicted RBP12.56□□□□□ -0.4
MARK3-208ENST00000554627 GNAI1P63096 354 aa12.56□□□□□ -0.4
MARK3-208ENST00000554627 DDX54Q8TDD1 881 aaKnown RBP12.56□□□□□ -0.4
MARK3-208ENST00000554627 IFT57Q9NWB7 429 aa12.56□□□□□ -0.4
MARK3-208ENST00000554627 RNMTO43148 476 aaKnown RBP12.56□□□□□ -0.4
MARK3-208ENST00000554627 TEFQ10587 303 aa12.56□□□□□ -0.4
MARK3-208ENST00000554627 NKX1-1Q15270 411 aaPredicted RBP12.56□□□□□ -0.4
MARK3-208ENST00000554627 MCM10Q7L590 875 aa12.56□□□□□ -0.4
MARK3-208ENST00000554627 LAMB4A4D0S4 1761 aa12.55□□□□□ -0.4
MARK3-208ENST00000554627 MPRIPQ6WCQ1 1025 aa12.55□□□□□ -0.4
MARK3-208ENST00000554627 BABAM1Q9NWV8 329 aa12.55□□□□□ -0.4
MARK3-208ENST00000554627 BTAF1O14981 1849 aa12.54□□□□□ -0.4
MARK3-208ENST00000554627 ERVV-2B6SEH9 535 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms