RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 PRDM11Q9NQV5 511 aa3.92□□□□□ -1.78
SYNE2-212ENST00000554584 ZNF530Q6P9A1 599 aaPredicted RBP3.92□□□□□ -1.78
SYNE2-212ENST00000554584 RNF169Q8NCN4 708 aa3.92□□□□□ -1.78
SYNE2-212ENST00000554584 DRC1Q96MC2 740 aa3.92□□□□□ -1.78
SYNE2-212ENST00000554584 CRACR2BQ8N4Y2 399 aaPredicted RBP3.92□□□□□ -1.78
SYNE2-212ENST00000554584 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.92□□□□□ -1.78
SYNE2-212ENST00000554584 SKIV2LQ15477 1246 aaKnown RBP3.92□□□□□ -1.78
SYNE2-212ENST00000554584 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.92□□□□□ -1.78
SYNE2-212ENST00000554584 CCDC191Q8NCU4 936 aa3.92□□□□□ -1.78
SYNE2-212ENST00000554584 PPP2R5DQ14738 602 aa3.92□□□□□ -1.78
SYNE2-212ENST00000554584 FKBP15Q5T1M5 1219 aa3.92□□□□□ -1.78
SYNE2-212ENST00000554584 ROCK2O75116 1388 aaKnown RBP3.92□□□□□ -1.78
SYNE2-212ENST00000554584 ZRANB1Q9UGI0 708 aa3.92□□□□□ -1.78
SYNE2-212ENST00000554584 ATF5Q9Y2D1 282 aaPredicted RBP3.92□□□□□ -1.78
SYNE2-212ENST00000554584 SMIM23A6NLE4 172 aa3.91□□□□□ -1.78
SYNE2-212ENST00000554584 GOPCQ9HD26 462 aa3.91□□□□□ -1.78
SYNE2-212ENST00000554584 BMP2KQ9NSY1 1161 aaPredicted RBP3.91□□□□□ -1.78
SYNE2-212ENST00000554584 GOLGA6L10A0A0M3HER8 536 aa3.91□□□□□ -1.78
SYNE2-212ENST00000554584 GOLGA6L10A6NI86 522 aa3.91□□□□□ -1.78
SYNE2-212ENST00000554584 HARSP12081 509 aaKnown RBP3.91□□□□□ -1.78
SYNE2-212ENST00000554584 MRRFQ96E11 262 aaKnown RBP3.91□□□□□ -1.78
SYNE2-212ENST00000554584 FHOD3Q2V2M9 1422 aa3.91□□□□□ -1.78
SYNE2-212ENST00000554584 TTC39AQ5SRH9 613 aa3.91□□□□□ -1.78
SYNE2-212ENST00000554584 TCEANC2Q96MN5 208 aa3.91□□□□□ -1.78
SYNE2-212ENST00000554584 POLD1P28340 1107 aa3.91□□□□□ -1.78
SYNE2-212ENST00000554584 CHST3Q7LGC8 479 aa3.91□□□□□ -1.78
SYNE2-212ENST00000554584 TSHZ3Q63HK5 1081 aa3.91□□□□□ -1.78
SYNE2-212ENST00000554584 LMAN1P49257 510 aa3.91□□□□□ -1.78
SYNE2-212ENST00000554584 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.91□□□□□ -1.78
SYNE2-212ENST00000554584 KLF15Q9UIH9 416 aa3.91□□□□□ -1.78
SYNE2-212ENST00000554584 LRRFIP2Q9Y608 721 aaKnown RBP3.91□□□□□ -1.78
SYNE2-212ENST00000554584 FERMT3Q86UX7 667 aa3.91□□□□□ -1.78
SYNE2-212ENST00000554584 SULF1Q8IWU6 871 aa3.91□□□□□ -1.78
SYNE2-212ENST00000554584 SIX5Q8N196 739 aa3.91□□□□□ -1.78
SYNE2-212ENST00000554584 FEZ1Q99689 392 aa3.91□□□□□ -1.78
SYNE2-212ENST00000554584 RNF216Q9NWF9 866 aaPredicted RBP3.91□□□□□ -1.78
SYNE2-212ENST00000554584 TTC36A6NLP5 189 aa3.91□□□□□ -1.78
SYNE2-212ENST00000554584 TSKSQ9UJT2 592 aa3.91□□□□□ -1.78
SYNE2-212ENST00000554584 CENPJQ9HC77 1338 aaPredicted RBP3.91□□□□□ -1.78
SYNE2-212ENST00000554584 IPO7O95373 1038 aaKnown RBP3.91□□□□□ -1.78
SYNE2-212ENST00000554584 GPR162Q16538 588 aa3.91□□□□□ -1.78
SYNE2-212ENST00000554584 IPO4Q8TEX9 1081 aaKnown RBP3.91□□□□□ -1.78
SYNE2-212ENST00000554584 NDUFB9Q9Y6M9 179 aa3.91□□□□□ -1.78
SYNE2-212ENST00000554584 ERCC3P19447 782 aa3.9□□□□□ -1.78
SYNE2-212ENST00000554584 HAND2P61296 217 aa3.9□□□□□ -1.78
SYNE2-212ENST00000554584 SMIM5Q71RC9 77 aa3.9□□□□□ -1.78
SYNE2-212ENST00000554584 ERCC5P28715 1186 aaPredicted RBP3.9□□□□□ -1.78
SYNE2-212ENST00000554584 SPOUT1Q5T280 376 aaKnown RBP3.9□□□□□ -1.78
SYNE2-212ENST00000554584 FIBPO43427 364 aa3.9□□□□□ -1.78
SYNE2-212ENST00000554584 PPME1Q9Y570 386 aa3.9□□□□□ -1.78
SYNE2-212ENST00000554584 PRPF4BQ13523 1007 aaKnown RBP3.9□□□□□ -1.78
SYNE2-212ENST00000554584 GINS2Q9Y248 185 aa3.9□□□□□ -1.78
SYNE2-212ENST00000554584 TRAPPC10P48553 1259 aa3.9□□□□□ -1.78
SYNE2-212ENST00000554584 FKBP4Q02790 459 aaKnown RBP eCLIP3.9□□□□□ -1.79
SYNE2-212ENST00000554584 IFRD2Q12894 506 aaPredicted RBP3.9□□□□□ -1.79
SYNE2-212ENST00000554584 CCDC178Q5BJE1 867 aa3.9□□□□□ -1.79
SYNE2-212ENST00000554584 RWDD1Q9H446 243 aaPredicted RBP3.9□□□□□ -1.79
SYNE2-212ENST00000554584 RCAN3Q9UKA8 241 aa3.9□□□□□ -1.79
SYNE2-212ENST00000554584 DDX49Q9Y6V7 483 aaKnown RBP3.9□□□□□ -1.79
SYNE2-212ENST00000554584 EIF6P56537 245 aaKnown RBP3.9□□□□□ -1.79
SYNE2-212ENST00000554584 KIF3AQ9Y496 699 aa3.9□□□□□ -1.79
SYNE2-212ENST00000554584 FAM180AQ6UWF9 173 aa3.9□□□□□ -1.79
SYNE2-212ENST00000554584 MARCH10Q8NA82 808 aaPredicted RBP3.9□□□□□ -1.79
SYNE2-212ENST00000554584 JAKMIP2Q96AA8 810 aa3.9□□□□□ -1.79
SYNE2-212ENST00000554584 RAPGEF3O95398 923 aa3.9□□□□□ -1.79
SYNE2-212ENST00000554584 KIF6Q6ZMV9 814 aa3.9□□□□□ -1.79
SYNE2-212ENST00000554584 BZW2Q9Y6E2 419 aaKnown RBP3.9□□□□□ -1.79
SYNE2-212ENST00000554584 CSPP1Q1MSJ5 1256 aa3.9□□□□□ -1.79
SYNE2-212ENST00000554584 SURF6O75683 361 aaKnown RBP3.9□□□□□ -1.79
SYNE2-212ENST00000554584 PRDM5Q9NQX1 630 aaPredicted RBP3.9□□□□□ -1.79
SYNE2-212ENST00000554584 ABL1P00519 1130 aa3.9□□□□□ -1.79
SYNE2-212ENST00000554584 C4orf50Q6ZRC1 276 aa3.9□□□□□ -1.79
SYNE2-212ENST00000554584 LRRC2Q9BYS8 371 aa3.9□□□□□ -1.79
SYNE2-212ENST00000554584 CKAP2LQ8IYA6 745 aa3.89□□□□□ -1.79
SYNE2-212ENST00000554584 ANKRD20A12PQ8NF67 263 aa3.89□□□□□ -1.79
SYNE2-212ENST00000554584 CCDC34Q96HJ3 373 aa3.89□□□□□ -1.79
SYNE2-212ENST00000554584 DCLK2Q8N568 766 aa3.89□□□□□ -1.79
SYNE2-212ENST00000554584 SMC3Q9UQE7 1217 aa3.89□□□□□ -1.79
SYNE2-212ENST00000554584 PDS5BQ9NTI5 1447 aa3.89□□□□□ -1.79
SYNE2-212ENST00000554584 EXOSC9Q06265 439 aaKnown RBP3.89□□□□□ -1.79
SYNE2-212ENST00000554584 VGFO15240 615 aaPredicted RBP3.89□□□□□ -1.79
SYNE2-212ENST00000554584 IPO8O15397 1037 aaKnown RBP3.89□□□□□ -1.79
SYNE2-212ENST00000554584 CT47B1P0C2W7 299 aaPredicted RBP3.89□□□□□ -1.79
SYNE2-212ENST00000554584 CCDC73Q6ZRK6 1079 aa3.89□□□□□ -1.79
SYNE2-212ENST00000554584 TMCO5AQ8N6Q1 288 aa3.89□□□□□ -1.79
SYNE2-212ENST00000554584 PPP1R16BQ96T49 567 aa3.89□□□□□ -1.79
SYNE2-212ENST00000554584 NOP2P46087 812 aaKnown RBP3.89□□□□□ -1.79
SYNE2-212ENST00000554584 TRDNQ13061 729 aa3.89□□□□□ -1.79
SYNE2-212ENST00000554584 SAFBQ15424 915 aaKnown RBP eCLIP3.89□□□□□ -1.79
SYNE2-212ENST00000554584 SCAF8Q9UPN6 1271 aaKnown RBP3.89□□□□□ -1.79
SYNE2-212ENST00000554584 CCDC173Q0VFZ6 552 aa3.89□□□□□ -1.79
SYNE2-212ENST00000554584 SREK1Q8WXA9 508 aaKnown RBP3.89□□□□□ -1.79
SYNE2-212ENST00000554584 ASCC3Q8N3C0 2202 aaKnown RBP3.89□□□□□ -1.79
SYNE2-212ENST00000554584 PSMC4P43686 418 aa3.89□□□□□ -1.79
SYNE2-212ENST00000554584 MYD88Q99836 296 aa3.89□□□□□ -1.79
SYNE2-212ENST00000554584 FAM107BQ9H098 131 aa3.89□□□□□ -1.79
SYNE2-212ENST00000554584 ITM2BQ9Y287 266 aa3.89□□□□□ -1.79
SYNE2-212ENST00000554584 FRMD4BQ9Y2L6 1034 aa3.89□□□□□ -1.79
SYNE2-212ENST00000554584 DIXDC1Q155Q3 683 aa3.89□□□□□ -1.79
SYNE2-212ENST00000554584 F6X3S4 739 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms