RNA–Protein interactions for RNA: ENST00000554556.5

GABRB3-206, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-206ENST00000554556 ARXQ96QS3 562 aa31.05■■■□□ 2.56
GABRB3-206ENST00000554556 SMG6Q86US8 1419 aaKnown RBP31.05■■■□□ 2.56
GABRB3-206ENST00000554556 CGNL1Q0VF96 1302 aa31.04■■■□□ 2.56
GABRB3-206ENST00000554556 NBPF6Q5VWK0 638 aa31.03■■■□□ 2.56
GABRB3-206ENST00000554556 SLC16A10Q8TF71 515 aa31.03■■■□□ 2.56
GABRB3-206ENST00000554556 RAPGEF4Q8WZA2 1011 aa31.03■■■□□ 2.56
GABRB3-206ENST00000554556 AKT1S1Q96B36 256 aa31.03■■■□□ 2.56
GABRB3-206ENST00000554556 NBPF4Q96M43 638 aa31.03■■■□□ 2.56
GABRB3-206ENST00000554556 DOT1LQ8TEK3 1739 aa31.01■■■□□ 2.56
GABRB3-206ENST00000554556 MEGF6O75095 1541 aa31.01■■■□□ 2.55
GABRB3-206ENST00000554556 QSER1Q2KHR3 1735 aa30.99■■■□□ 2.55
GABRB3-206ENST00000554556 SHANK3Q9BYB0 1731 aa30.99■■■□□ 2.55
GABRB3-206ENST00000554556 KIF20BQ96Q89 1820 aa30.99■■■□□ 2.55
GABRB3-206ENST00000554556 TATP17735 454 aaPredicted RBP30.98■■■□□ 2.55
GABRB3-206ENST00000554556 TFCP2L1Q9NZI6 479 aa30.98■■■□□ 2.55
GABRB3-206ENST00000554556 INSRP06213 1382 aa30.97■■■□□ 2.55
GABRB3-206ENST00000554556 KIF24Q5T7B8 1368 aa30.97■■■□□ 2.55
GABRB3-206ENST00000554556 USHBP1Q8N6Y0 703 aa30.97■■■□□ 2.55
GABRB3-206ENST00000554556 LY75O60449 1722 aa30.96■■■□□ 2.55
GABRB3-206ENST00000554556 TIMELESSQ9UNS1 1208 aa30.96■■■□□ 2.55
GABRB3-206ENST00000554556 FLT4P35916 1363 aa30.95■■■□□ 2.55
GABRB3-206ENST00000554556 POLD1P28340 1107 aa30.95■■■□□ 2.55
GABRB3-206ENST00000554556 HSP90AB2PQ58FF8 381 aa30.95■■■□□ 2.55
GABRB3-206ENST00000554556 NSD2O96028 1365 aa30.94■■■□□ 2.54
GABRB3-206ENST00000554556 MAP3K5Q99683 1374 aa30.94■■■□□ 2.54
GABRB3-206ENST00000554556 KCNQ4P56696 695 aa30.93■■■□□ 2.54
GABRB3-206ENST00000554556 CCNL1Q9UK58 526 aaPredicted RBP30.93■■■□□ 2.54
GABRB3-206ENST00000554556 PNPLA7Q6ZV29 1317 aa30.93■■■□□ 2.54
GABRB3-206ENST00000554556 HMGB2P26583 209 aaKnown RBP30.92■■■□□ 2.54
GABRB3-206ENST00000554556 CARD14Q9BXL6 1004 aa30.9■■■□□ 2.54
GABRB3-206ENST00000554556 PCDH11XQ9BZA7 1347 aa30.9■■■□□ 2.54
GABRB3-206ENST00000554556 PCDH11YQ9BZA8 1340 aa30.9■■■□□ 2.54
GABRB3-206ENST00000554556 CHD4Q14839 1912 aa30.89■■■□□ 2.54
GABRB3-206ENST00000554556 TUBGCP6Q96RT7 1819 aa30.88■■■□□ 2.53
GABRB3-206ENST00000554556 NSD3Q9BZ95 1437 aa30.88■■■□□ 2.53
GABRB3-206ENST00000554556 KLHL34Q8N239 644 aa30.86■■■□□ 2.53
GABRB3-206ENST00000554556 COL24A1Q17RW2 1714 aa30.86■■■□□ 2.53
GABRB3-206ENST00000554556 GPR162Q16538 588 aa30.84■■■□□ 2.53
GABRB3-206ENST00000554556 EMILIN1Q9Y6C2 1016 aa30.84■■■□□ 2.53
GABRB3-206ENST00000554556 CLSPNQ9HAW4 1339 aa30.83■■■□□ 2.53
GABRB3-206ENST00000554556 MSH5O43196 834 aa30.83■■■□□ 2.53
GABRB3-206ENST00000554556 PPM1GO15355 546 aaPredicted RBP30.82■■■□□ 2.52
GABRB3-206ENST00000554556 ZNF784Q8NCA9 323 aaPredicted RBP30.81■■■□□ 2.52
GABRB3-206ENST00000554556 MPRIPQ6WCQ1 1025 aa30.8■■■□□ 2.52
GABRB3-206ENST00000554556 CYP27B1O15528 508 aa30.79■■■□□ 2.52
GABRB3-206ENST00000554556 MAP2P11137 1827 aaKnown RBP30.79■■■□□ 2.52
GABRB3-206ENST00000554556 COL23A1Q86Y22 540 aaPredicted RBP30.78■■■□□ 2.52
GABRB3-206ENST00000554556 SMARCC1Q92922 1105 aaPredicted RBP30.78■■■□□ 2.52
GABRB3-206ENST00000554556 SPG7Q9UQ90 795 aa30.78■■■□□ 2.52
GABRB3-206ENST00000554556 WASHC2AQ641Q2 1341 aa30.77■■■□□ 2.52
GABRB3-206ENST00000554556 FLAD1Q8NFF5 587 aa30.77■■■□□ 2.52
GABRB3-206ENST00000554556 PALLDQ8WX93 1383 aa30.77■■■□□ 2.52
GABRB3-206ENST00000554556 C5P01031 1676 aa30.75■■■□□ 2.51
GABRB3-206ENST00000554556 PCGF6Q9BYE7 350 aa30.75■■■□□ 2.51
GABRB3-206ENST00000554556 ITGB4P16144 1822 aa30.75■■■□□ 2.51
GABRB3-206ENST00000554556 PKD1L3Q7Z443 1732 aa30.74■■■□□ 2.51
GABRB3-206ENST00000554556 POLR3GLQ9BT43 218 aa30.74■■■□□ 2.51
GABRB3-206ENST00000554556 ANKRD26Q9UPS8 1709 aa30.73■■■□□ 2.51
GABRB3-206ENST00000554556 PELP1Q8IZL8 1130 aaKnown RBP30.73■■■□□ 2.51
GABRB3-206ENST00000554556 TAF1LQ8IZX4 1826 aa30.73■■■□□ 2.51
GABRB3-206ENST00000554556 NCAPD2Q15021 1401 aa30.73■■■□□ 2.51
GABRB3-206ENST00000554556 NKX1-1Q15270 411 aaPredicted RBP30.72■■■□□ 2.51
GABRB3-206ENST00000554556 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.72■■■□□ 2.51
GABRB3-206ENST00000554556 EYA1Q99502 592 aa30.71■■■□□ 2.51
GABRB3-206ENST00000554556 POLKQ9UBT6 870 aa30.7■■■□□ 2.51
GABRB3-206ENST00000554556 TOGARAM1Q9Y4F4 1720 aa30.68■■■□□ 2.5
GABRB3-206ENST00000554556 NLGN2Q8NFZ4 835 aa30.68■■■□□ 2.5
GABRB3-206ENST00000554556 PIGBQ92521 554 aa30.68■■■□□ 2.5
GABRB3-206ENST00000554556 MSL1Q68DK7 614 aa30.67■■■□□ 2.5
GABRB3-206ENST00000554556 AK7Q96M32 723 aa30.67■■■□□ 2.5
GABRB3-206ENST00000554556 EIF4G2P78344 907 aaKnown RBP eCLIP30.65■■■□□ 2.5
GABRB3-206ENST00000554556 IFNL2Q8IZJ0 200 aa30.65■■■□□ 2.5
GABRB3-206ENST00000554556 GRIN3BO60391 1043 aa30.64■■■□□ 2.5
GABRB3-206ENST00000554556 TMOD3Q9NYL9 352 aa30.64■■■□□ 2.5
GABRB3-206ENST00000554556 C4BP0C0L5 1744 aa30.64■■■□□ 2.5
GABRB3-206ENST00000554556 TNNT2P45379 298 aaPredicted RBP30.63■■■□□ 2.49
GABRB3-206ENST00000554556 EIF4A2Q14240 407 aaKnown RBP30.61■■■□□ 2.49
GABRB3-206ENST00000554556 CD2APQ9Y5K6 639 aa30.61■■■□□ 2.49
GABRB3-206ENST00000554556 LOC102724428A0A0B4J2F2 783 aa30.6■■■□□ 2.49
GABRB3-206ENST00000554556 PHKG2P15735 406 aa30.6■■■□□ 2.49
GABRB3-206ENST00000554556 SIK1P57059 783 aa30.6■■■□□ 2.49
GABRB3-206ENST00000554556 PLEKHG2Q9H7P9 1386 aa30.58■■■□□ 2.49
GABRB3-206ENST00000554556 HSPA5P11021 654 aaKnown RBP30.57■■■□□ 2.48
GABRB3-206ENST00000554556 PANK3Q9H999 370 aa30.57■■■□□ 2.48
GABRB3-206ENST00000554556 UBR3Q6ZT12 1888 aa30.57■■■□□ 2.48
GABRB3-206ENST00000554556 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.56■■■□□ 2.48
GABRB3-206ENST00000554556 PHF14O94880 888 aa30.56■■■□□ 2.48
GABRB3-206ENST00000554556 SSFA2P28290 1259 aa30.56■■■□□ 2.48
GABRB3-206ENST00000554556 ASAP1Q9ULH1 1129 aa30.56■■■□□ 2.48
GABRB3-206ENST00000554556 YBX3P16989 372 aaKnown RBP eCLIP30.55■■■□□ 2.48
GABRB3-206ENST00000554556 ATP6V1AP38606 617 aa30.54■■■□□ 2.48
GABRB3-206ENST00000554556 C1QTNF8P60827 252 aa30.53■■■□□ 2.48
GABRB3-206ENST00000554556 LINC00116Q8NCU8 138 aa30.53■■■□□ 2.48
GABRB3-206ENST00000554556 IGSF1Q8N6C5 1336 aa30.52■■■□□ 2.48
GABRB3-206ENST00000554556 HSP90AB1P08238 724 aaKnown RBP30.52■■■□□ 2.48
GABRB3-206ENST00000554556 UTRNP46939 3433 aa30.52■■■□□ 2.48
GABRB3-206ENST00000554556 PLEKHO1Q53GL0 409 aaPredicted RBP30.51■■■□□ 2.47
GABRB3-206ENST00000554556 AMIGO3Q86WK7 504 aa30.51■■■□□ 2.47
GABRB3-206ENST00000554556 ATG3Q9NT62 314 aa30.51■■■□□ 2.47
GABRB3-206ENST00000554556 ERVV-2B6SEH9 535 aa30.49■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms