RNA–Protein interactions for RNA: ENST00000554453.5

ABCD4-221, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-221ENST00000554453 PDGFDQ9GZP0 370 aaPredicted RBP15.35■□□□□ 0.05
ABCD4-221ENST00000554453 WASHC2AQ641Q2 1341 aa15.35■□□□□ 0.05
ABCD4-221ENST00000554453 SLC27A3Q5K4L6 730 aa15.34■□□□□ 0.05
ABCD4-221ENST00000554453 PANK3Q9H999 370 aa15.34■□□□□ 0.05
ABCD4-221ENST00000554453 LRRC4BQ9NT99 713 aa15.34■□□□□ 0.05
ABCD4-221ENST00000554453 POLKQ9UBT6 870 aa15.34■□□□□ 0.05
ABCD4-221ENST00000554453 MAP2P11137 1827 aaKnown RBP15.33■□□□□ 0.05
ABCD4-221ENST00000554453 NHSQ6T4R5 1651 aa15.33■□□□□ 0.04
ABCD4-221ENST00000554453 PPM1GO15355 546 aaPredicted RBP15.33■□□□□ 0.04
ABCD4-221ENST00000554453 SMG6Q86US8 1419 aaKnown RBP15.33■□□□□ 0.04
ABCD4-221ENST00000554453 KIF20BQ96Q89 1820 aa15.32■□□□□ 0.04
ABCD4-221ENST00000554453 SYTL4Q96C24 671 aaPredicted RBP15.32■□□□□ 0.04
ABCD4-221ENST00000554453 PPP1R1BQ9UD71 204 aaPredicted RBP15.32■□□□□ 0.04
ABCD4-221ENST00000554453 MEGF6O75095 1541 aa15.32■□□□□ 0.04
ABCD4-221ENST00000554453 MYOM1P52179 1685 aa15.32■□□□□ 0.04
ABCD4-221ENST00000554453 BTAF1O14981 1849 aa15.31■□□□□ 0.04
ABCD4-221ENST00000554453 ZBTB7AO95365 584 aa15.3■□□□□ 0.04
ABCD4-221ENST00000554453 EYA1Q99502 592 aa15.3■□□□□ 0.04
ABCD4-221ENST00000554453 ATF5Q9Y2D1 282 aaPredicted RBP15.3■□□□□ 0.04
ABCD4-221ENST00000554453 CYP27B1O15528 508 aa15.29■□□□□ 0.04
ABCD4-221ENST00000554453 PTGER2P43116 358 aa15.29■□□□□ 0.04
ABCD4-221ENST00000554453 AKT1S1Q96B36 256 aa15.29■□□□□ 0.04
ABCD4-221ENST00000554453 MTFR1LQ9H019 292 aa15.29■□□□□ 0.04
ABCD4-221ENST00000554453 PCDH11XQ9BZA7 1347 aa15.28■□□□□ 0.04
ABCD4-221ENST00000554453 PCDH11YQ9BZA8 1340 aa15.28■□□□□ 0.04
ABCD4-221ENST00000554453 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.28■□□□□ 0.04
ABCD4-221ENST00000554453 TNNT2P45379 298 aaPredicted RBP15.27■□□□□ 0.04
ABCD4-221ENST00000554453 NKX1-1Q15270 411 aaPredicted RBP15.27■□□□□ 0.04
ABCD4-221ENST00000554453 ZNF827Q17R98 1081 aa15.27■□□□□ 0.04
ABCD4-221ENST00000554453 SLC16A10Q8TF71 515 aa15.27■□□□□ 0.04
ABCD4-221ENST00000554453 SGIP1Q9BQI5 828 aa15.27■□□□□ 0.04
ABCD4-221ENST00000554453 CASZ1Q86V15 1759 aa15.26■□□□□ 0.03
ABCD4-221ENST00000554453 NSD2O96028 1365 aa15.26■□□□□ 0.03
ABCD4-221ENST00000554453 HMGB2P26583 209 aaKnown RBP15.26■□□□□ 0.03
ABCD4-221ENST00000554453 KCNQ4P56696 695 aa15.26■□□□□ 0.03
ABCD4-221ENST00000554453 SPG7Q9UQ90 795 aa15.26■□□□□ 0.03
ABCD4-221ENST00000554453 NCAPD2Q15021 1401 aa15.26■□□□□ 0.03
ABCD4-221ENST00000554453 EIF4A2Q14240 407 aaKnown RBP15.25■□□□□ 0.03
ABCD4-221ENST00000554453 KNSTRNQ9Y448 316 aa15.25■□□□□ 0.03
ABCD4-221ENST00000554453 SHANK3Q9BYB0 1731 aa15.25■□□□□ 0.03
ABCD4-221ENST00000554453 MORC1Q86VD1 984 aa15.24■□□□□ 0.03
ABCD4-221ENST00000554453 CCNL1Q9UK58 526 aaPredicted RBP15.24■□□□□ 0.03
ABCD4-221ENST00000554453 DCAF8L1A6NGE4 600 aa15.23■□□□□ 0.03
ABCD4-221ENST00000554453 MPRIPQ6WCQ1 1025 aa15.23■□□□□ 0.03
ABCD4-221ENST00000554453 TFCP2L1Q9NZI6 479 aa15.23■□□□□ 0.03
ABCD4-221ENST00000554453 SMARCC1Q92922 1105 aaPredicted RBP15.22■□□□□ 0.03
ABCD4-221ENST00000554453 SYT17Q9BSW7 474 aa15.22■□□□□ 0.03
ABCD4-221ENST00000554453 PAPPAQ13219 1627 aa15.21■□□□□ 0.03
ABCD4-221ENST00000554453 PNPLA7Q6ZV29 1317 aa15.21■□□□□ 0.03
ABCD4-221ENST00000554453 IFNL2Q8IZJ0 200 aa15.21■□□□□ 0.03
ABCD4-221ENST00000554453 PIGBQ92521 554 aa15.21■□□□□ 0.03
ABCD4-221ENST00000554453 ARXQ96QS3 562 aa15.21■□□□□ 0.03
ABCD4-221ENST00000554453 KIF7Q2M1P5 1343 aa15.2■□□□□ 0.02
ABCD4-221ENST00000554453 PER1O15534 1290 aaPredicted RBP15.2■□□□□ 0.02
ABCD4-221ENST00000554453 AMER1Q5JTC6 1135 aaPredicted RBP15.2■□□□□ 0.02
ABCD4-221ENST00000554453 FHDC1Q9C0D6 1143 aaPredicted RBP15.2■□□□□ 0.02
ABCD4-221ENST00000554453 LY75O60449 1722 aa15.2■□□□□ 0.02
ABCD4-221ENST00000554453 DOT1LQ8TEK3 1739 aa15.2■□□□□ 0.02
ABCD4-221ENST00000554453 ANKRD26Q9UPS8 1709 aa15.2■□□□□ 0.02
ABCD4-221ENST00000554453 IGSF1Q8N6C5 1336 aa15.19■□□□□ 0.02
ABCD4-221ENST00000554453 PHKG2P15735 406 aa15.19■□□□□ 0.02
ABCD4-221ENST00000554453 PLEKHO1Q53GL0 409 aaPredicted RBP15.18■□□□□ 0.02
ABCD4-221ENST00000554453 COL23A1Q86Y22 540 aaPredicted RBP15.18■□□□□ 0.02
ABCD4-221ENST00000554453 PLEKHG2Q9H7P9 1386 aa15.18■□□□□ 0.02
ABCD4-221ENST00000554453 PALLDQ8WX93 1383 aa15.17■□□□□ 0.02
ABCD4-221ENST00000554453 FLAD1Q8NFF5 587 aa15.17■□□□□ 0.02
ABCD4-221ENST00000554453 ITGB4P16144 1822 aa15.17■□□□□ 0.02
ABCD4-221ENST00000554453 POLD1P28340 1107 aa15.16■□□□□ 0.02
ABCD4-221ENST00000554453 AMOTQ4VCS5 1084 aa15.16■□□□□ 0.02
ABCD4-221ENST00000554453 TMOD3Q9NYL9 352 aa15.16■□□□□ 0.02
ABCD4-221ENST00000554453 PKD1L3Q7Z443 1732 aa15.16■□□□□ 0.02
ABCD4-221ENST00000554453 ERVV-2B6SEH9 535 aa15.15■□□□□ 0.02
ABCD4-221ENST00000554453 HSP90AB1P08238 724 aaKnown RBP15.15■□□□□ 0.02
ABCD4-221ENST00000554453 IL13P35225 146 aa15.15■□□□□ 0.02
ABCD4-221ENST00000554453 ASAP1Q9ULH1 1129 aa15.15■□□□□ 0.02
ABCD4-221ENST00000554453 QSER1Q2KHR3 1735 aa15.14■□□□□ 0.01
ABCD4-221ENST00000554453 LOC102724428A0A0B4J2F2 783 aa15.14■□□□□ 0.01
ABCD4-221ENST00000554453 SIK1P57059 783 aa15.14■□□□□ 0.01
ABCD4-221ENST00000554453 MAP3K5Q99683 1374 aa15.13■□□□□ 0.01
ABCD4-221ENST00000554453 MSH5O43196 834 aa15.13■□□□□ 0.01
ABCD4-221ENST00000554453 YY1P25490 414 aa15.13■□□□□ 0.01
ABCD4-221ENST00000554453 MTHFSP49914 203 aa15.13■□□□□ 0.01
ABCD4-221ENST00000554453 DCAF5Q96JK2 942 aa15.13■□□□□ 0.01
ABCD4-221ENST00000554453 ATG3Q9NT62 314 aa15.13■□□□□ 0.01
ABCD4-221ENST00000554453 SULT6B1Q6IMI4 303 aa15.12■□□□□ 0.01
ABCD4-221ENST00000554453 AEBP1Q8IUX7 1158 aa15.12■□□□□ 0.01
ABCD4-221ENST00000554453 ZNF530Q6P9A1 599 aaPredicted RBP15.11■□□□□ 0.01
ABCD4-221ENST00000554453 TAF1LQ8IZX4 1826 aa15.1■□□□□ 0.01
ABCD4-221ENST00000554453 COL24A1Q17RW2 1714 aa15.1■□□□□ 0.01
ABCD4-221ENST00000554453 TOGARAM1Q9Y4F4 1720 aa15.1■□□□□ 0.01
ABCD4-221ENST00000554453 ATP6V1AP38606 617 aa15.1■□□□□ 0.01
ABCD4-221ENST00000554453 AK7Q96M32 723 aa15.1■□□□□ 0.01
ABCD4-221ENST00000554453 TUBGCP6Q96RT7 1819 aa15.1■□□□□ 0.01
ABCD4-221ENST00000554453 ITPK1Q13572 414 aa15.09■□□□□ 0.01
ABCD4-221ENST00000554453 CC2D1BQ5T0F9 858 aaKnown RBP15.09■□□□□ 0.01
ABCD4-221ENST00000554453 KDRP35968 1356 aa15.09■□□□□ 0.01
ABCD4-221ENST00000554453 NPC1L1Q9UHC9 1359 aa15.09■□□□□ 0.01
ABCD4-221ENST00000554453 CABP4P57796 275 aa15.08■□□□□ 0
ABCD4-221ENST00000554453 C1orf141Q5JVX7 400 aa15.08■□□□□ 0
ABCD4-221ENST00000554453 AMIGO3Q86WK7 504 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms