RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 FLT4P35916 1363 aa26.03■■□□□ 1.76
CPSF2-203ENST00000554290 PTGER2P43116 358 aa26.02■■□□□ 1.76
CPSF2-203ENST00000554290 HSP90AB2PQ58FF8 381 aa26.02■■□□□ 1.76
CPSF2-203ENST00000554290 USHBP1Q8N6Y0 703 aa26.02■■□□□ 1.76
CPSF2-203ENST00000554290 LRRC4BQ9NT99 713 aa26.02■■□□□ 1.76
CPSF2-203ENST00000554290 NSD3Q9BZ95 1437 aa26.02■■□□□ 1.76
CPSF2-203ENST00000554290 MEGF6O75095 1541 aa26.02■■□□□ 1.76
CPSF2-203ENST00000554290 TATP17735 454 aaPredicted RBP26.01■■□□□ 1.75
CPSF2-203ENST00000554290 KAT6BQ8WYB5 2073 aa26■■□□□ 1.75
CPSF2-203ENST00000554290 KIF20BQ96Q89 1820 aa26■■□□□ 1.75
CPSF2-203ENST00000554290 RGPD2P0DJD1 1756 aa25.98■■□□□ 1.75
CPSF2-203ENST00000554290 ZNF827Q17R98 1081 aa25.98■■□□□ 1.75
CPSF2-203ENST00000554290 PAPPAQ13219 1627 aa25.97■■□□□ 1.75
CPSF2-203ENST00000554290 MYOM1P52179 1685 aa25.96■■□□□ 1.75
CPSF2-203ENST00000554290 AKT1S1Q96B36 256 aa25.95■■□□□ 1.74
CPSF2-203ENST00000554290 POLR3GLQ9BT43 218 aa25.95■■□□□ 1.74
CPSF2-203ENST00000554290 EMILIN1Q9Y6C2 1016 aa25.95■■□□□ 1.74
CPSF2-203ENST00000554290 PPM1GO15355 546 aaPredicted RBP25.94■■□□□ 1.74
CPSF2-203ENST00000554290 PCDH11XQ9BZA7 1347 aa25.93■■□□□ 1.74
CPSF2-203ENST00000554290 PCDH11YQ9BZA8 1340 aa25.93■■□□□ 1.74
CPSF2-203ENST00000554290 YY1P25490 414 aa25.93■■□□□ 1.74
CPSF2-203ENST00000554290 EIF4G2P78344 907 aaKnown RBP eCLIP25.93■■□□□ 1.74
CPSF2-203ENST00000554290 SGIP1Q9BQI5 828 aa25.93■■□□□ 1.74
CPSF2-203ENST00000554290 NSD2O96028 1365 aa25.93■■□□□ 1.74
CPSF2-203ENST00000554290 DOT1LQ8TEK3 1739 aa25.92■■□□□ 1.74
CPSF2-203ENST00000554290 SLC16A10Q8TF71 515 aa25.92■■□□□ 1.74
CPSF2-203ENST00000554290 FHDC1Q9C0D6 1143 aaPredicted RBP25.92■■□□□ 1.74
CPSF2-203ENST00000554290 SHANK3Q9BYB0 1731 aa25.91■■□□□ 1.74
CPSF2-203ENST00000554290 CCER1Q8TC90 406 aaPredicted RBP25.91■■□□□ 1.74
CPSF2-203ENST00000554290 TFCP2L1Q9NZI6 479 aa25.91■■□□□ 1.74
CPSF2-203ENST00000554290 KCNQ4P56696 695 aa25.9■■□□□ 1.74
CPSF2-203ENST00000554290 ARXQ96QS3 562 aa25.9■■□□□ 1.74
CPSF2-203ENST00000554290 SYT17Q9BSW7 474 aa25.9■■□□□ 1.74
CPSF2-203ENST00000554290 CCNL1Q9UK58 526 aaPredicted RBP25.9■■□□□ 1.74
CPSF2-203ENST00000554290 WASHC2AQ641Q2 1341 aa25.89■■□□□ 1.74
CPSF2-203ENST00000554290 HSPA5P11021 654 aaKnown RBP25.87■■□□□ 1.73
CPSF2-203ENST00000554290 HMGB2P26583 209 aaKnown RBP25.87■■□□□ 1.73
CPSF2-203ENST00000554290 PNPLA7Q6ZV29 1317 aa25.87■■□□□ 1.73
CPSF2-203ENST00000554290 CYP27B1O15528 508 aa25.85■■□□□ 1.73
CPSF2-203ENST00000554290 POLKQ9UBT6 870 aa25.85■■□□□ 1.73
CPSF2-203ENST00000554290 SPG7Q9UQ90 795 aa25.85■■□□□ 1.73
CPSF2-203ENST00000554290 POLD1P28340 1107 aa25.84■■□□□ 1.73
CPSF2-203ENST00000554290 LY75O60449 1722 aa25.83■■□□□ 1.73
CPSF2-203ENST00000554290 MPRIPQ6WCQ1 1025 aa25.83■■□□□ 1.73
CPSF2-203ENST00000554290 NCAPD2Q15021 1401 aa25.82■■□□□ 1.72
CPSF2-203ENST00000554290 EYA1Q99502 592 aa25.82■■□□□ 1.72
CPSF2-203ENST00000554290 QSER1Q2KHR3 1735 aa25.81■■□□□ 1.72
CPSF2-203ENST00000554290 TNNT2P45379 298 aaPredicted RBP25.81■■□□□ 1.72
CPSF2-203ENST00000554290 MAP3K5Q99683 1374 aa25.81■■□□□ 1.72
CPSF2-203ENST00000554290 SMARCC1Q92922 1105 aaPredicted RBP25.8■■□□□ 1.72
CPSF2-203ENST00000554290 PANK3Q9H999 370 aa25.8■■□□□ 1.72
CPSF2-203ENST00000554290 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.8■■□□□ 1.722e-7■■□□□ 12.6
CPSF2-203ENST00000554290 ANKRD26Q9UPS8 1709 aa25.8■■□□□ 1.72
CPSF2-203ENST00000554290 NKX1-1Q15270 411 aaPredicted RBP25.79■■□□□ 1.72
CPSF2-203ENST00000554290 MSH5O43196 834 aa25.78■■□□□ 1.72
CPSF2-203ENST00000554290 PALLDQ8WX93 1383 aa25.78■■□□□ 1.72
CPSF2-203ENST00000554290 MAP2P11137 1827 aaKnown RBP25.77■■□□□ 1.72
CPSF2-203ENST00000554290 PKD1L3Q7Z443 1732 aa25.75■■□□□ 1.71
CPSF2-203ENST00000554290 EIF4A2Q14240 407 aaKnown RBP25.75■■□□□ 1.71
CPSF2-203ENST00000554290 KLHL34Q8N239 644 aa25.75■■□□□ 1.71
CPSF2-203ENST00000554290 COL23A1Q86Y22 540 aaPredicted RBP25.74■■□□□ 1.71
CPSF2-203ENST00000554290 FLAD1Q8NFF5 587 aa25.74■■□□□ 1.71
CPSF2-203ENST00000554290 PIGBQ92521 554 aa25.74■■□□□ 1.71
CPSF2-203ENST00000554290 IFNL2Q8IZJ0 200 aa25.73■■□□□ 1.71
CPSF2-203ENST00000554290 TMOD3Q9NYL9 352 aa25.71■■□□□ 1.71
CPSF2-203ENST00000554290 TUBGCP6Q96RT7 1819 aa25.71■■□□□ 1.71
CPSF2-203ENST00000554290 PHKG2P15735 406 aa25.7■■□□□ 1.7
CPSF2-203ENST00000554290 MORC1Q86VD1 984 aa25.7■■□□□ 1.7
CPSF2-203ENST00000554290 PLEKHG2Q9H7P9 1386 aa25.69■■□□□ 1.7
CPSF2-203ENST00000554290 GPR162Q16538 588 aa25.69■■□□□ 1.7
CPSF2-203ENST00000554290 KNSTRNQ9Y448 316 aa25.69■■□□□ 1.7
CPSF2-203ENST00000554290 COL24A1Q17RW2 1714 aa25.68■■□□□ 1.7
CPSF2-203ENST00000554290 TOGARAM1Q9Y4F4 1720 aa25.68■■□□□ 1.7
CPSF2-203ENST00000554290 IGSF1Q8N6C5 1336 aa25.68■■□□□ 1.7
CPSF2-203ENST00000554290 AK7Q96M32 723 aa25.68■■□□□ 1.7
CPSF2-203ENST00000554290 C5P01031 1676 aa25.68■■□□□ 1.7
CPSF2-203ENST00000554290 ITGB4P16144 1822 aa25.66■■□□□ 1.7
CPSF2-203ENST00000554290 LOC102724428A0A0B4J2F2 783 aa25.65■■□□□ 1.7
CPSF2-203ENST00000554290 SIK1P57059 783 aa25.65■■□□□ 1.7
CPSF2-203ENST00000554290 MSL1Q68DK7 614 aa25.65■■□□□ 1.7
CPSF2-203ENST00000554290 PLEKHO1Q53GL0 409 aaPredicted RBP25.64■■□□□ 1.7
CPSF2-203ENST00000554290 HSP90AB1P08238 724 aaKnown RBP25.63■■□□□ 1.69
CPSF2-203ENST00000554290 PELP1Q8IZL8 1130 aaKnown RBP25.63■■□□□ 1.69
CPSF2-203ENST00000554290 ASAP1Q9ULH1 1129 aa25.63■■□□□ 1.69
CPSF2-203ENST00000554290 TAF1LQ8IZX4 1826 aa25.61■■□□□ 1.69
CPSF2-203ENST00000554290 C4BP0C0L5 1744 aa25.61■■□□□ 1.69
CPSF2-203ENST00000554290 AMOTQ4VCS5 1084 aa25.61■■□□□ 1.69
CPSF2-203ENST00000554290 NLGN2Q8NFZ4 835 aa25.61■■□□□ 1.69
CPSF2-203ENST00000554290 ERVV-2B6SEH9 535 aa25.6■■□□□ 1.69
CPSF2-203ENST00000554290 ZNF784Q8NCA9 323 aaPredicted RBP25.6■■□□□ 1.69
CPSF2-203ENST00000554290 DCAF5Q96JK2 942 aa25.6■■□□□ 1.69
CPSF2-203ENST00000554290 ATG3Q9NT62 314 aa25.6■■□□□ 1.69
CPSF2-203ENST00000554290 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.59■■□□□ 1.69
CPSF2-203ENST00000554290 PHF14O94880 888 aa25.59■■□□□ 1.69
CPSF2-203ENST00000554290 SSFA2P28290 1259 aa25.59■■□□□ 1.69
CPSF2-203ENST00000554290 ATP6V1AP38606 617 aa25.59■■□□□ 1.69
CPSF2-203ENST00000554290 ZNF530Q6P9A1 599 aaPredicted RBP25.58■■□□□ 1.69
CPSF2-203ENST00000554290 LINC00116Q8NCU8 138 aa25.58■■□□□ 1.69
CPSF2-203ENST00000554290 CD2APQ9Y5K6 639 aa25.57■■□□□ 1.68
CPSF2-203ENST00000554290 KIF7Q2M1P5 1343 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms